Array 1 2870786-2872074 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069161.1 Paludibacterium paludis strain BCRC 80514 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2870786 28 100.0 32 ............................ TTAAGGCCTTCCCAGGTATACACGTTCGCAGC 2870846 28 100.0 32 ............................ ACAACACCCGGCGTCTCACCGTAACGCTTGAC 2870906 28 100.0 32 ............................ CTTCATTCCCGATCAGATCGCGGAATGCGCTG 2870966 28 100.0 32 ............................ TTTCCAGAAGGTCTTTGTTGTCCGCCACAACA 2871026 28 100.0 32 ............................ TTCAGCAGCTCGGCCATGCTGCGATACTCGAC 2871086 28 100.0 32 ............................ GTCGGCAATCAGGTCGCCCTGAAAGAAGTTTC 2871146 28 100.0 32 ............................ ATGATGCATGCGAAGTTGTCCATGATCCGTTT 2871206 28 100.0 32 ............................ TTGTGTGGACCGCCGGACTGGCCAGCTTGGGA 2871266 28 100.0 32 ............................ AATACCCTATCAATTACGATTCGAAGGAACTG 2871326 28 100.0 32 ............................ GCTACATCATGCTGGGGATGCTGGCTGAACAG 2871386 28 100.0 32 ............................ AGAGTGGCACGGGTTCACAGTCTCCAGCGACG 2871446 28 100.0 32 ............................ TGCATCATGTTGATCTCGTTCCAAACCCATCG 2871506 28 100.0 32 ............................ GGCATCAATGAGGGTTTCGAACGGAACGATGC 2871566 28 100.0 32 ............................ GTTGCTCTCGCGGTGTTGCGGTCGTTTCTGGT 2871626 28 100.0 32 ............................ AGTGAGCAAGCGGCGGCGTGGTCGACGGTGCT 2871686 28 100.0 32 ............................ GCCTCGCAGCATCCACAAGACTGCCGTGGCAA 2871746 28 100.0 32 ............................ ATGAAATTGCCCTGGCACGCCCAGGGGCTCGG 2871806 28 100.0 32 ............................ AGCGAGCGATAGTTGTCGAGGGTCAGGCTCCC 2871866 28 100.0 32 ............................ CATGACGCATCGGCCGTGCCTGATGACAAAAC 2871926 28 96.4 32 ..................T......... TTAGCCCGTTGATCGAAGCCGGTAATGCCGGT 2871986 28 100.0 32 ............................ GCAAACCGTGGGAGTGAAAGAGATCCCGCGAG 2872046 28 96.4 0 ......................A..... | C [2872066] ========== ====== ====== ====== ============================ ================================ ================== 22 28 99.7 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : GCTGGTTGACGGGGTTCGCCGACCATGCCATCACGGGAAATATCTTGCCTGTCCCGGCCAGCACAAGCCATATCCGCGTTCTTCGGCGGCAAGTGAAAAGCTGCCCGGCACGGGAACGAGACCGGTTGATGCGCAGGAAGAATCTCTCCCTGGAGGAGGCATGCAGATGTATTCCGGACAGCAAAGCAAAACGGCTGGATCTTCCCTTCCTTACGGTAGATAGTTCCAGCACCGGACAACGATTCCGTCTATTCATCCAACAGCTATCAGCAGCAAAAATTGTCGAAGGCAGTTTTAACGCTTATGGCCTAAGCCCAAGCGCAACGTTGCCCCAGTGGTGAGTCAAAGGGTTGCCCGCCCTCCCTCGGGTAACCCTTTTTTTCAGAGCCATATCTGATCATTAAAAATCAAAAGGTTACACAACGCCCGCTCATTAGGGTTTCCAGCGCCTTTTCGTCGAGAAACCATGCCCAGTATGAATTTCGAACGAAATGCCTCTA # Right flank : AGGGGAAGTCCGACCGCACACCGATACTTTCTGGCGGATAAGGGCAACGGAGCGAGGGTTACCCGGTCAACTACACAATTTTGGCGAAACAAAAACACTAAACCGCGTTTGACGCCGAGACGCAGTCCAGCACCGGATGGCGGCGTAAATGAAGATGAAGCACGCGATTCCGGCCGATCCACTTCCTGCGAGGCCCCATCACCACAAACTGAGAACCTCCCTATTCTGCCTCGATACCGTCGAATGGGGAGGTGAGAACAGTGAAGCCGCCGTATAATGCCGGCATGATCATTCTCAACCAGAGACAACAGGATCTTCTCGCCTGGGTGCAGCGCGAGGGGCATGTGACGGTCGAACGTCTCGCCACGCATTTCGGCGTCACCCACCAGACCATCCGCCGCGACATCTCGCTGCTGGCCGACAATCGCATGCTGCAGCGTTTTCACGGGGGCGCGAGTATCCACTCCAGCGTGGAAAACGTCGCCTACAATGCGCGCCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //