Array 1 27521-17828 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMJF01000103.1 Acinetobacter junii TG19608 A_junii_TG19608_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 27520 30 93.3 30 ............................AG TCAAACCAATCAGATACTTTTTGCCAAAAT 27460 30 93.3 30 ............................AA GTGGGAAACCATCTGCGTTGTATGTAGCAA 27400 30 96.7 30 .............................G TAGATTGAAGAATTGTATTGTCGTAATTGG 27340 30 96.7 30 ............................A. TAAAAGAACCGCTTACATAGCCTGAGCCGC 27280 30 96.7 30 ............................A. AATGAATCGCTAAGAGACTCTAAGCCAATT 27220 30 100.0 30 .............................. GCGACCCCTGCGCACAGCTTCGGGGACTCG 27160 30 96.7 30 .............................G ATCCAGATACACCTGACGACCCTAATAACT 27100 30 93.3 30 ............................AC AACCAAAAACAACATAAGTCTATATATATC 27040 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 26980 30 100.0 30 .............................. GCCAAGAATCCAAACGGCAAAGTTATTCCA 26920 30 96.7 30 .............................A AAAGCGACTAAAAAAAGATCAAAATCTTAT 26860 30 96.7 30 ............................G. TTTCTAATGCCGTCCTACGTCTTGAGGCAC 26800 30 100.0 30 .............................. GATCTCAACGTATGGCGTGGCGTTCATTGT 26740 30 96.7 30 .............................G CTTTCGGCTTTGGAATCTTGACGGGTAAGG 26680 30 93.3 30 ............................AC GTATATTTTCCGCTTGCCACACCAGAACAT 26620 30 96.7 30 .............................G ACTCCAAAAAGTTTTTTGCAATTTGCTCTG 26560 30 96.7 30 ............................G. TGAACTCTACAACATCAAACGCTTTTTAAT 26500 30 93.3 30 ............................AC GCACAGAAGGGATCAGAATGTCCCATGAGG 26440 30 93.3 30 ............................CG AGTAAAAAGAGTTAAAGGAGATAGTAGTGC 26380 30 100.0 30 .............................. CGTTAAACTGACTAGGTTTTGCTTTTTCGA 26320 30 96.7 30 .............................G ATACCATATCAATTCTCCAGGCAGTATTTG 26260 30 93.3 30 ............................AC TCTTGAATCAGGTATCAAAATAGAAATTTC 26200 30 93.3 30 ............................AA TGGGTCGCAACCAATACAAACGTTGTGAAT 26140 30 96.7 30 ............................A. CGGCTTTTGAGTAGACTTTCATAAAAAAAC 26080 30 93.3 30 ............................AG TGAGATAGAGATGTTATCCAGACTGATGTA 26020 30 100.0 30 .............................. TAACTTTGCTAGTTCCGCTTGGGGTTATAA 25960 30 93.3 30 ............................AA GAATAGCCATTCTTCCCGCAGTTTCGCTCT 25900 30 96.7 30 .............................A AGCAGCAAAGGTTTGTCGAAGAATATCTGA 25840 30 100.0 30 .............................. GTACAAGGCAAATGCTAAATTCATGCTATA 25780 30 96.7 31 .............................A ACTGCCAGGATGAACCCCCTACTCACTGGAT 25719 30 96.7 30 ............................A. TTTGAATTGATCATCGCTCAACCCAAACAG 25659 30 96.7 30 ............................A. TGAAGTTATTCAGCCAAATAACAAGCTCTA 25599 30 93.3 30 ............................GC CCAAAATACCTTTGAACGAAGTTTCTCTTG 25539 30 93.3 30 ............................AA TTAAAGCAAGGTTAGAGCTTGAATTGATGT 25479 30 93.3 30 ............................GC TCCTTGAAGAATCTATTTTTAGGATTGAAA 25419 30 100.0 30 .............................. CAAATTGAGGGGCAACGTAAGAGTTGAATT 25359 30 96.7 30 .............................G GGTAATTTCACCTGGTGTGATACCTGGGTA 25299 30 93.3 30 ............................CA AGCAATATCATCATCATGGACTTCTTTTAA 25239 30 93.3 30 ............................AA ATTGAACTTTGACGATATCGAGAGCTTTAT 25179 30 100.0 30 .............................. CTGTAAAGCTTCATACTCAAGTGGACTTAA 25119 30 96.7 30 .............................G AACCAGGTCTTCCACCGATCACGCAAAAAT 25059 30 93.3 30 ............................AG CAAGCTACTCCAACTCAATCAACAAAAGAG 24999 30 96.7 30 ............................A. AAGGATGATTCGGAGTTGCTGGAGTGGGCA 24939 30 93.3 30 ............................AA CTTAACACACCATTGACCACGCTAGATATT 24879 30 100.0 30 .............................. GTAACGCCTGCCTGTTAAAACGCTTTCTTC 24819 30 93.3 30 ............................AC AGGGGAAATGACGAAATTGATAATCTTATG 24759 30 100.0 30 .............................. TCAGTCCATAGTTAGGGTGGTTTTTACCAC 24699 30 93.3 30 ............................AA TGGTGGTGCATGGCAGATGATTAAAGTAAG 24639 30 93.3 30 ............................AA GGGGGTATCTGATTTAATTGTGATTGGAAA 24579 30 100.0 30 .............................. TCCCGACAAAAGCCTGATCAATGTCAACTT 24519 30 100.0 30 .............................. TCGCGTATCTAGCCTTAGCCTTATCAGATA 24459 30 93.3 30 ............................GC CGTGAAAGGGCGACGCTCCAGAGTTCGATT 24399 30 96.7 30 .............................A TCACGTCGCTAGCGTGCGAGGACGAGGAGC 24339 30 100.0 30 .............................. ATTACTCTCACACAGCTAATGGCATGTGCT 24279 30 93.3 30 ............................AA TTGCAGTTCCAGTTGATAAATCCATTGGGA 24219 30 96.7 30 ............................A. CTGGGAGATCACGCCAATCGAAAGGCTTGT 24159 30 96.7 30 .............................A AAATATGGTGTGCCAGTCGGTAGGCTTTCC 24099 30 96.7 30 .............................C CCATTGTGATTGAGTGAGAGCATGGCTTTC 24039 30 96.7 30 .............................A GTGTTACTGACGTAGACGATGCGAATGCCC 23979 30 93.3 30 ............................AA CACCAATAGAATCATAAACGATTAGCGCGT 23919 30 93.3 30 ............................AC TCAAAGAGAATTCTATTTATAGAGGCAAGT 23859 30 96.7 30 .............................A CCCAGTATTCAAGTACTGGCATGGCAGCTG 23799 30 96.7 30 .............................A GACAAAACCTGATATTTGATCCAAAGCAAA 23739 30 93.3 30 ............................GC CACAAAGAGCGAAACGCCCATGCAAGGTGA 23679 30 93.3 30 ............................AA TAAAAGAACGCGCTCCTGATGTTTTACCAT 23619 30 96.7 30 .............................G AAAAGATTGAAGTTGAAATCATGGTTAAAG 23559 30 100.0 30 .............................. TGGCTGTTGATACGGGGCAAGGGGGTAGTA 23499 30 100.0 30 .............................. TGGGTGAAGTTGCAGAAAATGGTGTGCTCC 23439 30 93.3 30 ............................AG TCGCATTAGCATTTGTGGCCAATAACATTC 23379 30 93.3 30 ............................GA TCAAAAAGAAACAACCGCCTGTACGTCCAC 23319 30 93.3 30 ............................AC ATTAAAGGCTATGGAAAGATCATCTGTCGA 23259 30 96.7 30 ............................A. TTGTTACTATAGAGATATTGTGTTCAAAAA 23199 30 96.7 30 ............................A. AATAACTACGGTTATGAAGATTATGAGTTT 23139 30 96.7 30 .............................G AGTGCGAAGATGATTCAAAGCGATTCATGC 23079 30 96.7 30 ............................A. TCGGTGCCAATACACCGCCAACCCATTTAC 23019 30 93.3 30 ............................CA CCCAAAAACCAGTTGCATTACTTGAATACC 22959 30 96.7 30 ............................A. AGGGCGACTGGATATAGTCATCCTGATGTT 22899 30 96.7 30 ............................A. TAGCTTTTTAAGTCCATCAATTTTTTCTGG 22839 30 96.7 30 .............................A AAGAAAAGCGCAGAACTCAATGAATACAGC 22779 30 100.0 30 .............................. ACAGAACTGGTGAGGGCTGGATTGCTGAAA 22719 30 96.7 30 ............................G. TGGCAAGTTTTCAAACATATCAATATCAAG 22659 30 100.0 30 .............................. CGTTAAACAAATAGTACACACCGCTAAACA 22599 30 100.0 30 .............................. GAGTACAAACATTCCCATCTTCAACGAATA 22539 30 93.3 30 ............................AC TCGGAAATAAATTCTGAATGTTGTCCGTAT 22479 30 96.7 30 .............................G TAGCGCCGTGTTTGATAAGAATTGGTTTTC 22419 30 96.7 30 .............................A AAATATCGGGGTTGATGTTGAGGCCAGCTT 22359 30 93.3 30 ............................AC GGCGCAAGCGAGAACGTTAAGCGACTTGTC 22299 30 96.7 30 .............................G AGTACAAGGCGACGTACCCAACCGATGAGG 22239 30 100.0 30 .............................. GAAAAGCAGCTAAACATGACTGCTTTCATC 22179 30 93.3 30 ............................CG TGGAATGCGTGACATGCAGGAGGACATCAA 22119 30 96.7 30 .............................G ATCGTGCGGATGAGGTTGTAACTGGTTCGA 22059 30 100.0 30 .............................. CCACTGGAAATGATGATCAATGCCGTAACA 21999 30 96.7 30 .............................G TATAGATAAGACACAACTAACCACATCACA 21939 30 100.0 30 .............................. TTCGCTACTCACCTGTTGTCGATTCCTTTA 21879 30 93.3 31 ............................AC GTACCTTCAAATACAGAATACCCGTTTGTCG 21818 30 96.7 30 ............................A. TTCCAAATAGCACGTTGCCTGAGTTCATCT 21758 30 96.7 30 .............................A ACACCGCAATCGTATGTTGCAGCAGGTAAA 21698 30 96.7 30 .............................G AATACAGCACCCCAACAGGTGAAACTATTC 21638 30 96.7 30 .............................A CATGCGCGACAACACTTCAATTCAGATGAT 21578 30 96.7 30 ............................A. TAGGTGAGAAGTGGCATGCGGACCATTTGG 21518 30 96.7 30 ............................A. TACGAGTGCAAATTCTTTCCAAGGGTTAAT 21458 30 93.3 30 ............................GC AAAAGCTCGCATCAATCGTGATCAAGTAAA 21398 30 93.3 30 ............................GA AAGGCGGTTTTTTATTGCGTGGAGAAAAGT 21338 30 100.0 30 .............................. TCAATAATGCAATCGACTGATATGCAATAC 21278 30 100.0 30 .............................. GTGAACGCGTTTAGAACGCGCCACAGGTTT 21218 30 96.7 30 .............................C AAACAAGATAGATTCGGACTTGGCGCATTT 21158 30 96.7 30 ............................A. ATTTGGAGCGAATCGAAGAAAGCGCACGAA 21098 30 93.3 30 ............................GA ATTTGAATAAAACAGCGTGTCAAAAATGGC 21038 30 93.3 30 ............................AC TGGGGTGGGCTGTTGCAACTTTTATTTTTC 20978 30 100.0 30 .............................. CAAGAGCATCGCATCACTGTCGTCATTCTC 20918 30 93.3 30 ............................AA CATGGGAATGTTGTGTACCACTTTATCAAT 20858 30 96.7 30 .............................G GTGTTAGACCTGGAACCAGGGATAAAAGCC 20798 30 96.7 30 .............................G ATTATTAGGAAAAGATATGAGCCATATCAT 20738 30 93.3 30 ............................AA TAACTGTTACGGACTGGTGGAATCGCTCAA 20678 30 96.7 30 .............................C ATTAGTTAAAGTAATTTCACCGCTTTAGCG 20618 30 96.7 30 ............................A. GAGAATACGCATGGCGTTCTTAGGATTACT 20558 30 96.7 30 ............................A. ACGGATAACACTGATCTACCAGTACAAGAA 20498 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 20438 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 20378 30 96.7 30 ............................C. AGCAATTGCTCTACTGCAATAGATAAAGCA 20318 30 100.0 30 .............................. GTAAGGGATTTGATAATAAAATTCATTGAT 20258 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 20198 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 20138 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 20078 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 20018 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 19958 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 19898 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 19837 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 19777 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 19717 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 19657 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 19597 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 19537 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 19477 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 19417 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 19357 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 19297 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 19237 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 19177 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 19117 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 19057 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 18997 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 18937 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 18877 30 100.0 30 .............................. TTAAGTATTCACGTTCAGCAATAGTTAAAT 18817 30 96.7 30 ............................G. GACGGAGAAGGGTGATGAAGAAATTAAACG 18757 30 93.3 30 ............................AA AATGCGAATTAACTACGGCAAGAAGTTCAT 18697 30 93.3 30 ............................AC CCGATAATGGCCGACCATTGTCGTCAAAGA 18637 30 93.3 30 ............................AA TTTGTCAGTGTCTGCGGCGACTCATCAATA 18577 30 93.3 30 ............................AA AATACTCACTCACTACTGCTGACAACGTAT 18517 30 96.7 30 .............................C GAAAGTCATGGGATCAGATTGGAAAGATGC 18457 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 18397 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 18337 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 18277 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 18217 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 18157 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 18097 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 18037 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 17977 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 17917 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 17857 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 162 30 96.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGGGGATTGAGGAACGTATAGTTCATCAAGCGCAACGTCGAAAAATTTCTTTGGATGAAGCTAAGCAACATTTTAAACAATATATTGAACAACCTATCATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCTAAACGAGAACAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTTGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTCTTTAACAGCTCAATAAAATCAATAAGTTACACCAAGTCATTTTTTGGTTGGGTAAATTGCTAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : CATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAGCTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGAGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGATG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //