Array 1 4367703-4367430 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084023.1 Pectobacterium aroidearum strain LJ2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4367702 29 100.0 32 ............................. CGATTGATGATCGACTCGCAGAAATCGCCGCC 4367641 29 93.1 32 ..G..........T............... TAGGAGTTATCGCTATCATGAATATCAGTACG 4367580 29 93.1 32 ..G.....T.................... GGATAACAATTTCACCGGGCTATTTATATGAC 4367519 29 100.0 32 ............................. GTAATCAAATTCCCCGGACCTGAGTCGGGGCA 4367458 29 89.7 0 ............T..........G...G. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTATTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATGACTTGTATGCTCATAGTGTATTGCTCCAACATTTTCTTTCGATGGGTGAAAATCAGATGTGGTGTAAAGAAGGATGCGCTTTCCTTCTTAGTATGTCGTCGTTGTCCTACGCTTGACTTCAAGTATCTCGCACACCTGTGGTATTTCGTTGATTAGTTCAAAGATAATGCGGTAATCCCCAACCCGTAGCCGATATTGTTTACCAGACGATTCGAGTTTTTTCAGGTCCAGATTCACATCTGGAAATGTACTCAGCTCGCCCACTTTTTCTTTGATTCGTTTTCGATATCTGGTGTCAATGGTGCCGAGTTGTTTTAATGCCCGTTTTGACCAACTAATCTTAAGCATGCATCCCTCAAACGAAATCCTTCCCTGATATAAGTTAATTATAAGACAATTTAAGGGTTATGTTCATTTTTCTTATTTTTTTGTTGATGATTATGCTGTTCCTTCAGGGACAAATCGCGGGAATTTGACGTTGGATCAGAGCCATATAC # Right flank : TTATACCCCTTGTTGCATGTTGGTCTACATGTTCCCCGCATGGGCCAAATCCCGCTGCTGGCTGGCGCGATGGGGGATTGCGTGTCAGTATTAAAGCACGCCATTTTTGCATTCACCGTCACGGTGATGCGTTATGCCAATGATTTTTGTCTTCCATACGTTACCGTAAGGAGGTGATATGAAAGTTGAAGCCGCAGAGTCGTCCGTCTTTGCCAGCCAGCAGGTGATGGCGAAGCGTTCCACAGAGCATGCTGAGAAAGCGGCACTGTCCGAACAGCTTCAGTCTTATCAGGCGGGTAGCGGTGCCGTTCCTGTTGGTCAGACGACGCGGTATGATTTCACCCGCATTAGCCCCGCCGAGCTGTATGAAACGGTAGAAGGCCTTGTCAGCAGTGGGCGGTTGGGGCGTGAAGAGGGTTCCGCGCTACTGGGTTTTATCTCGTCGCCGCGCGAAAATGTCGGCAGTGTGCCGCCTTCCAATGTCTTTCAGCCTATTAATG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //