Array 1 2008693-2007577 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UFYC01000001.1 Corynebacterium renale strain NCTC11142, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
   2008692	    29	  96.6	    32	............................G	CGGCTTATCGAGCATTTGCGTATTGCGGGTTA 	
   2008631	    29	 100.0	    32	.............................	CTGGGCATCAAGCTCACGCTTGACTCCGGCTA 	
   2008570	    29	 100.0	    32	.............................	CACATCCGGGAACGTTCCGGCATTCATAGCCG 	
   2008509	    29	  96.6	    32	............................T	CCTCAGCGATCCAGTTGCTGGAGGCACATAAG 	
   2008448	    29	 100.0	    32	.............................	TTGTGGAACTCCATGCCGTCTTCAAGAACGGG 	
   2008387	    29	 100.0	    32	.............................	ACAGTCACGCCCTCACGCTCGGCGGAGCACTC 	
   2008326	    29	  96.6	    32	............................T	AATAGAAAAGTGGGGAAGAAAGGAACACCAAC 	
   2008265	    29	 100.0	    32	.............................	ACCTCACATACCTGTGCCGGACACTCGCCGAA 	
   2008204	    29	  96.6	    33	............................A	CCGGAGGGCCAGCCCACCCCGTTGGGGTATCCG	
   2008142	    29	  96.6	    32	............................T	CCTCCATAATCTCCCCTGAAAAGAAAAGCGGG 	
   2008081	    29	 100.0	    32	.............................	ACCAACCTAAAAACGGGGGTGGTGTAGCGTGA 	
   2008020	    29	  96.6	    32	............................G	TCAAACAGTAAGAGGGTTTACCTCGCACGCGA 	
   2007959	    29	  93.1	    32	..............T.............T	TCGCACCTTGAGACGGTCGCCGCGCTCGACGC 	
   2007898	    29	  93.1	    32	..............T.............G	CACTCTACGAATCTGCAAATCATGATGGAGAT 	
   2007837	    29	  96.6	    32	..............T..............	GGCGAATACCGCGCGGGTGTCAAGGCCGTAGT 	
   2007776	    29	  96.6	    22	..............T..............	AGGTAGTAAGCGCCTAGGCGCT           	Deletion [2007726]
   2007725	    29	  96.6	    32	..............T..............	GAAGCCTTCGACATCATCGAAAACCAGCCGAA 	
   2007664	    29	  96.6	    31	..............T..............	CCATCGCGGTACGCCGGTCTTCTTCTGTGGG  	
   2007604	    28	  75.9	     0	...........G..T..A.....-..ATA	|                                	
==========	======	======	======	=============================	=================================	==================
        19	    29	  96.2	    32	GTGTTCCCCGCACACGCGGGGATGAGCCC	                                 	       

# Left flank :   ACCACACGTCAAACACCGCAGCAGCAGCGCAAGCTACATCAACTAGATGCTGCGTTAATGAAAGATACCCAGATTCATCGCCAGACTTGGCCCACAAAGAATTCGCCATGGGGCTGCGCCGAGAAACCCACCCATCGAACAGACGTGCCACATCAAGGGCACTTTTCGGAAGTTCATGTCCGACACTCATGATTAGCTTTCTTTTAGATGTTTTCTTCGATGGTTTTGAACCTATCCTGAAAACTAAAACATGTCAACACCCTATACCCAACTTAACGACTTTTTATCTGTTAAGTTGACGCTCTGAGAGCATCGTAGTGCGAGGTTATAGAATGTAGCTCATCCCTGCTTTTGCAGGGATGAGCCCTCGTTGAGTTGGGGCGATTATTTTTCCCTGCACCTGCAGGGACGGACTTAAGCCCCTATTTCCGTTCGATCAAGTCATATGTAAAACATATGTAAAATAGGCAATCGGCTGACAAAACTCCTGTTCAAGGAGT
# Right flank :  ATTCTCCAATTACTATTTCGGAACTCTGAACGCTTCTGATGTCTACAGTTTCACGCCCAGCTTCCGCATCACCACGAAATTAATCCCTGACACTCTCCCCCACCGCGGGCCATAATGGTCCCCATGACTCTTTATGATGACACCCTCGCCCTTTTGCAGCAGTTGATCCGCAACGCGTGCGTCAACGACCTCACCGCCGATTCTGGTCATGAGGTTCGTAACGCGGATACGTTGGAGGAGTTTTTCGCCGCGGAGATCGCATCCGGTTCGGTGAAGGTGCAGCGTTTTGAGCCACATCCGGGTCGTCGGTCGGTGGCGTTTACGGTGCCTGGCGCGGATGAAACCGCTGAACCGCTTACTCTTTTGGGGCATATTGATGTGGTGCCCGTCGATAAGCCGAAGTGGACCACGGATCCTTTCGGGGCGGAGATTATTGATGGGAAGATTTTTGGCCGCGGCGCGATGGACATGCTCTTCATCACCGCGGCGCAGGCTGCTGT

# Questionable array : NO	 Score: 5.49
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.46,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCACACGCGGGGATGAGCCC
# Alternate repeat :   GTGTTCCCCGCACATGCGGGGATGAGCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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