Array 1 32990-32687 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULY01000031.1 Butyricicoccus sp. OF13-6 OF13-6.Scaf31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================================ ================== 32989 22 95.7 46 ..............-........ TCTTTCTTACGCCTCGGTGTGTTGATGGTTTGTATTAAAAACAACT 32921 23 100.0 48 ....................... CTCCGGAACTCGGGAAAATACTGTCCCTCGAAAACATTAAAAACAACT 32850 23 95.7 48 .......A............... GGTTGAACCGGTCTACGATTAAGGCGTACAGGAGCATTAAAAACAACT 32779 23 100.0 47 ....................... TGCTCGAGCGTTTCGTTATACTCGGTAATTGCATATTAAAAACAACT 32709 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ================================================ ================== 5 23 98.3 48 AATCCCCGTAAGGGGACGGAAAC # Left flank : TCTACCATTCGAATGCCTACGGATTAAAAACAAC # Right flank : CAACAATCAAATGAAATTCAGCCGGAGCATTTTGGGCCGGATATAGAAGAAGGGACGAAAAATAATGTCTTATGTTTTGTTTACGCCTGTTGGCGGTCATGACCCGATTGCAAGTTTTCATGATGGTGCGGTGCTGCATATATGCCGCGTATATCGCCCGGAAAAAGTTTACCTGTATTTATCGCACGAAATGCTCGAACGCAGCAGACAGGATGACCGCTATCGCTTGAGCTTAGAAAAGCTGCAGCAGCAGCTGGGCTGTAAAATGGAAATCCATCAGATTGAACGAGATGAACTGACGCAGGTTCAGCTGTTCGATACCTTTTATACGGATTTCGATCAGCTGCTTCGGGAAATTCACAATGAAAACCCGGGCAGTACACTGCTTGTCAACCTATCTTCCGGTACACCGGCGATGAAGAGCGCACTGAATGTTATTTCTGTTCTGGCGCAGTATCCGATGCAGGCAGTTCAGGTATCGACCCCCAACAGACGGGAAA # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 1 76097-76764 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULY01000012.1 Butyricicoccus sp. OF13-6 OF13-6.Scaf12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =================================================== ================== 76097 23 100.0 51 ....................... CTTTTTAAAATCCGTATTTACTCACATATGGAGATCTAATTAAAAACAACT 76171 22 95.7 47 ...........-........... ATCAATATTATATTCTCTTAAATCTTGACTAAGTATTAAAAACAACT 76240 23 100.0 48 ....................... CCTTCGGCAGTTACATAATCGTTGATGTGGTCAGTATTAAAAACAACT 76311 22 95.7 48 ...........-........... TCGTCGTTGCTGCAACGATCATACGCCTGTTCTTCATTAAAAACAACT 76381 23 100.0 49 ....................... TAAAATCGCCTTGCCACGCCTTGGTCAGTCCGTTGTATTAAAAACTACT 76453 23 91.3 51 ......TA............... TCGTCGCAATTTTCAGCGACTCATCAGGGAATTTATTAATTAAAAACAACT 76527 23 100.0 50 ....................... ACTTTTGCACCGCTTGCGTTGCGTGTTCCGCGTTCCCATTAAAAACAACT 76600 23 100.0 48 ....................... TCTGTTGCGCCAATACGAGCATCAACCAATTCAACATTAAAAACAACT 76671 22 95.7 49 ...........-........... TCATTACCTCCACTCTGTCCAGAAACAACCCTCGCCATTAAAAACAACT 76742 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =================================================== ================== 10 23 97.8 49 AATCCCCGTAAGGGGACGGAAAC # Left flank : CAGAACTATGACAAGTGCTTTTTAGAGAAATTTCCCTTGAACGGGATCAGCGGCGGTGGTAATCTATATTTAGGCGGTGGCTGCGGTTATGTATCCAAAACGGTATCTTACCCGCTTCTGGGCGAGAACGGCGTGAAGCGGGTCAGTGAGATTATCGATTCGACACTGAATCGAGATGCAAAAATCAAGCATAAACACCGTGAGGATAAGAACAAGGGCGTTTCGCCGCATATGCTGAAATGCACTCAGTATGACGGCAGATTGTACGAAATGGGTGCATGCACCTTGTCAATTCAATAAATTTCCGCCGCAAGGTATTTCAAAGGGGATTTATATGCGTTATGCAGTTGATATAGCGCAAATTTGAAACAATTTTGTCGGTTAAAAAAGCGAACGCAAGATATTTTCGGGAAGAAACCGCTCGAAAATATTTTGCGCCGCAAACCGGCGAAAAACTCCTTGTGTGACGGGGGATTTTAAGGACAGGATTAAAAACAACT # Right flank : GC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 40750-41507 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULY01000016.1 Butyricicoccus sp. OF13-6 OF13-6.Scaf16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 40750 32 100.0 34 ................................ TTGATGGTTGCATAGTTCTTGATGTAGATGTTAG 40816 32 100.0 34 ................................ GTTTTCCTCCTATTTTCGGTGTTCAAACTGGACA 40882 32 100.0 34 ................................ CATTGCATTTCTGATTATCGGCGCACTTGGCAGC 40948 32 100.0 34 ................................ CCGCACCTCCGGCGTGCCGTCCGGCACGAACGTG 41014 32 100.0 34 ................................ GCCAGCGTTCTGGCGGACAGACCGTCAATCTTCT 41080 32 100.0 34 ................................ CTCTACGAAAAGATGCTCGACAGAGCATTTATAA 41146 32 100.0 34 ................................ ATCGGAGATAACGGCAACTGGTGGATTGGCGACA 41212 32 100.0 33 ................................ TATTACTCAGATTTGCATGACGCTGCACATGAG 41277 32 100.0 34 ................................ TACGCAGTCTGCGATACGATCAAGATCAAGCAGC 41343 32 96.9 34 ............G................... GAGAGGATGCCGCGCTGTGCATCGCGCATAATGC 41409 32 100.0 35 ................................ TTGATGAGCAGACCGGGTTTCTTGGTGTTCTCGAT 41476 32 93.8 0 ............G....G.............. | ========== ====== ====== ====== ================================ =================================== ================== 12 32 99.2 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : TTTGTGGAAATGAGGTGTCGAATATGCTGGTTGTGATTACTTACGATGTCAACACCGAAACAGCCGCCGGGCGCAAACGCCTGCGGCAGATTGCCAGGCAGTGCGTCAATTATGGACAGCGTGTGCAGAATTCCGTGTTTGAATGCCTGATTGACGCGGCTCAGTGCCGTATGCTGCAACAGAAGCTGTGCACCATTATGGATGATGAACTGGACAGTCTGCGATTTTACTATCTCGGCAACAAATATGAAAATAAGATTGAGCATTTTGGTGCGAAACGCGGCTATGAGCCGGAAGGCGTGCTTATGGTGTAAGGCGGTGCGAAGTGCAAGCAAACCGAAAAGCGTCGGCGCTTCGCACCGTAATTTCCGATAGATTATATACAATAGTTTTATCGAATGTCAAATTTGCAATTGTGTTTTGCACGAATCTATGCAAAACTGTTATTGTAATTGTTTATTTTGTAAAAATCATTGGGGATAGTCTTGGTGATTTTTGCT # Right flank : TGGCGGTGGTGTTCGGGGCTTCCTGCTCTCTGATGTCGCTCCCTTCACGGGATCGACACAGATAGCCGCACCACCATCCTCCCGTCCAACATCGCCCGATCTCTATCCCTCACAATCTTTCACCCGCCCGACCAAAACATTTGCACATGTCATGACACATGTGCTATAATAACTCCAATACCGCTATTGACAGCGCCGCACAGATTGTTGCGGCGTTTTGCCGGGAAGGAGAAAAATCAAATGAAAGCATACTTTGACAGCATCGAAAAGGAGGTTCCGGAGCAATTACAGCAGGTTTTCCTTAATCGCCGCGATACGGCTGTCATTACGATTGACATGCACGATGGACACCTGTCAACCGACCCGGACTGTCCATGTCCGTCTCCGCGAGGACGCGAGATCATCGAACCGCTCAATCATTTCATGAACGAAGCACGCGCGCTCGGTCTGCCGATCATCCATGTCCGCTCAACGCTGCGTAAGGGCGGCGCAGACGAAAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //