Array 1 235239-233890 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FTMS01000001.1 Alkalispirochaeta americana strain ASpG1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	================================	==================================	==================
    235238	    32	 100.0	    34	................................	ATCGCCGCGTTGCCACAGGGTAAAAGGCCGGTCG	
    235172	    32	 100.0	    34	................................	TACTATTTTCCTCATTCCCCGCCTCCTGTCATGG	
    235106	    32	 100.0	    34	................................	AGCTTGAAAGAATATCGGCTCATCGCCCGCTCAG	
    235040	    32	 100.0	    34	................................	ATCTCATCACTCACGACCAACCCCCTTTGCTCTC	
    234974	    32	 100.0	    34	................................	AAATTTTCCCGCTGGCTTTCTCGGATTTTCCGAG	
    234908	    32	 100.0	    34	................................	GCTGGATGGGTCAGGTCAGTGGGTATCAAGGGAC	
    234842	    32	 100.0	    34	................................	TAGTTTCACAAGCACCCACCGGCCAGTCATCAGG	
    234776	    32	 100.0	    34	................................	ACCATCGCGCCCAGAAGCGTGAGGTAGACGCCGA	
    234710	    32	 100.0	    34	................................	ATGAAGGCCGATATAAAGGCAATGATGGAGTGTG	
    234644	    32	 100.0	    34	................................	CATAGCTCAATGTGCGCCCTGCTCGCCACGGGAC	
    234578	    32	 100.0	    34	................................	CATAGCTCAATGTGCGCCCTGCTCGCCACGGGAC	
    234512	    32	 100.0	    33	................................	CTTGATTTTTGCCGGTATACTGACCGGCGGCAG 	
    234447	    32	 100.0	    34	................................	ACAAAAATAGCTTCTCTATCCTGGGAGAAATGCC	
    234381	    32	 100.0	    33	................................	CAAACCCCGCCAGCCGGATATGCAAGTCCTTTG 	
    234316	    32	 100.0	    33	................................	GGCGTCCCTGAGCTCAGCAAAAAAACCATCCAG 	
    234251	    32	 100.0	    34	................................	AGCGAGGTCGAGCCGTTTGCCGGAGCGATCTACC	
    234185	    32	 100.0	    34	................................	GTGATAAGGCTCACACGCCCCAGGGAACGAACAC	
    234119	    32	 100.0	    34	................................	CAGAGAACCGGGTGTCGTGCGCGGTGCCTCATCG	
    234053	    32	 100.0	    34	................................	AGAAGAATCGCACAGGAAGAGGCTACGCGAGAAC	
    233987	    32	 100.0	    34	................................	TGATTGAGGAGGGTCTGGCTTGGTGGTGGGTTCG	
    233921	    32	 100.0	     0	................................	|                                 	
==========	======	======	======	================================	==================================	==================
        21	    32	 100.0	    34	GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC	                                  	       

# Left flank :   TTTTTCTGGAGATAACGACATGATGGTGCTTGTCAGTTACGATGTAGCGGTGACCTCACCCGGCGGAGCTGCGAGATTGCGTAAAATTGCCAAGGAATGCCAGAACTACGGACAACGCGTGCAGTACTCCGTATTCGAGTGCATCCTTGACCCCGCCCAGTGGATGCGGCTAAAAAATAACCTCGAGAAGATCATAGACCGGGAACAGGACAGTCTCCGCTATTATCATCTCGGATCAAACTACAAACGCAAGGTCGAGCACATCGGCGCAAAACCGTCCCTGGACATGGAAGGACCGATGATAGTTTGACTGCTGAGGAGACATCGCGAACCGTAAAGGTTCAGGAACTCCCGGAGGTTTCGCGGAAGCCGTAATTCTTTTTGTAGCAATGATCTTTTACAGCATAGAGAAGGAAAAGCAGCCTCGCTCGTCGAGCGTGAACGACGTTCGCGAATCGGCGCTCTTAACTCACAGGCCAAAAAAGAGTTATAATTGGAAG
# Right flank :  AGGTATCCGAGTTTGCAAAGCTGGAAGGACGCTAGTCGCCCCTGTTGAGGCCCGCACTAATTGTTTATGAATCAGGGAATATAACCGAAATACTGTAGTTGAGACTTGAAAGAAAGGGGAAAGGAAACCGGGCTCATAGGTTAGCGGCCTACCCGATTTCCCCCACCAACTACAGTTATACTAATCGACCGTTCCGTATTTGACTACAGCCTCAGCTGGATAGAAATCTTCTGGAGATCAATTCTCAGGGAAGAAGGCTGTCCGCACTGCAGAAAGCTCGGCTGCTTCACCCGTCACGGAGCGTACAAGAAATACCATTACAGTCGGTTAGTCCCGATCCTGCGAGTCCGCTGTCGGGCGTATCGGAAAACTCTGATCGTTGACAAAGGCGAGTTTGGTGGTGGCGCATGCGATGATATGATTTTTTTACGTAACCGTAACATTATCCCCACCTGTTAATACCGGGTGCTTCTGGAGAGAATGTCTCTCCAGGAGGCAAA

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.20,-11.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,9.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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