Array 1 230926-232676 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEMI01000003.1 Pediococcus acidilactici strain FAM18986 FAM18986_scf0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 230926 36 100.0 30 .................................... AGATCATTTGAAAGATAAGAACTATGAATT 230992 36 100.0 30 .................................... TTAAGCGTTCTCTCAAAATCGCGCGGTCTT 231058 36 100.0 30 .................................... ATAGATCCAAAGCTAGAATATCCAACATCT 231124 36 100.0 30 .................................... GGCGCTAACCTTACGAAGCAAGCCGCGCAA 231190 36 100.0 30 .................................... GGACGCTCCCAATACCGACACCACATCGTG 231256 36 100.0 30 .................................... TTGAGTTTAAATTTGACAAACATAATTCCT 231322 36 100.0 30 .................................... GGCTACATGAACCAAGTGTCATGGAATGCA 231388 36 100.0 30 .................................... CCAGGAGAAAAAGGTTATGTCAACTACATG 231454 36 100.0 30 .................................... ATAGATCCAAAGCTAGAATATCCAACATCT 231520 36 100.0 30 .................................... AAGTCTAAAGAAGAAGACCCCGTTTATCAC 231586 36 100.0 29 .................................... CTCATCTTTTTTGCTTTTAACCATTGCTC 231651 36 100.0 30 .................................... TTTCGAATTGCTGTAAAAATTGAATCCCTT 231717 36 100.0 30 .................................... GAACCGTTAGATTGCCCGTTATATGTTGTG 231783 36 100.0 30 .................................... AAGCATTTGGCAGTAGTAGCAACATCAAGG 231849 36 100.0 30 .................................... CTGTTGGCGAGCTTGCTCTGCACTAATGCC 231915 36 100.0 30 .................................... CGAGAAACTATCTACGACCACTTGTGTTGA 231981 36 100.0 30 .................................... TCAAGATAAAGCATCTAAACATGAAATTTG 232047 36 100.0 30 .................................... GTGAAAGTTTCAATCCTTCATTTTGAATAA 232113 36 100.0 30 .................................... ACTACCAATGTAAGTGCCAATATAAACGTC 232179 36 100.0 30 .................................... TATTTGTGCTTGAATGGAGTCGGCGGGCAT 232245 36 100.0 30 .................................... TGCATCCCCACCTGAAAAAAGGGTGCACAC 232311 36 100.0 30 .................................... AATCTGACATCTAGCAACTCTTGATTAGTC 232377 36 100.0 30 .................................... TGGCATTTTCTCAGATTTTTATACATGTAT 232443 36 97.2 30 ..........A......................... ACGTTTAACGGTTACTTTATGGGGATTCCA 232509 36 100.0 30 .................................... CGTTCTACGCTGTTCATAAGTACCATTTGT 232575 36 97.2 30 ..............................G..... AAAATGCTGTGGCTTATGAACTCGATGACA 232641 36 77.8 0 ......A.......CC............C...TCAA | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.0 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCGCATTATTTAACGGCAAACCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : AAAATAGACATGATTATTTGTTTTAATATTGCAATCCTTAAATCTCCCCCAGCAAAGCAACGAGCTACTTGATAAAGTGTGACAGCTTTTAAGTAGCTTGTTGTTTTTTAGTAATAAAAAAAAGCCCAACCGAATCCCAATCCAGTCAGACCGTCTTAAATTACCTACATCACCAGCGGCAATACCACCAGGCCGTTCATCAAAATGTGCGCAATCATTGAAGTTTGGATGCGTCCCGTTTTATGGTACAGCCAGCAAAATAGCAGCCCAATCGCGGCGTATAAAAAGATGTGGCTGTCGTTATGCATAAAGGCGAACGCTAAGCTGGAAATGATCGCCATGATCGTCAAGCCTAAGTTCGAGCGCATCCCGAACAGCGTGCTTAAATTGCCAAACAAAACTTTTCGAAAAACTAATTCTTCCATAATGGGAGCTCCAACGGTGATTGCCAACACAAAAAACGGGTTGATTTTCGCTAGGGTAACTAACGTAGCCGTGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //