Array 1 521-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZN01000018.1 Companilactobacillus mindensis strain NBRC 107162 sequence018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================== ================== 520 35 100.0 30 ................................... CTTGGTGTTTGCATTCGTTGTATCTTGTTG 455 35 100.0 30 ................................... TTAGACGGCGCACTTGAGGAGCTATATGTA 390 35 100.0 30 ................................... GGATAATCCTTTTTGGATTCTTCTGTAAAA 325 35 100.0 30 ................................... CTTATCAAAGTACGGAAAAACAGGTCAGGA 260 35 100.0 30 ................................... AGGAGGGGTGACAATTTCATGGCTAAAGGC 195 35 100.0 30 ................................... TAATGCGTCTTCTGGACTTCGTGCTATACC 130 35 100.0 30 ................................... GCATGGTGTGGTAATCCAGCAACCATAGAC 65 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================== ================== 8 35 100.0 30 GTTTTAGAAGTAAGTCATCTCAATTACTAAGAACC # Left flank : CCTATTTGTTTATCAAGCGCTTTTTGGATCT # Right flank : CAGCTATTATCTTGTTCTATCTGTTCACCAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTAAGTCATCTCAATTACTAAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 653-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZN01000019.1 Companilactobacillus mindensis strain NBRC 107162 sequence019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================== ================== 652 35 100.0 31 ................................... AAAAAATAATTGAAAAAGTTATTGCATATAT 586 35 100.0 30 ................................... TTTAATAGCATTACTTGTTTCCCCCGCCGA 521 35 100.0 31 ................................... CGCTACTAACAAGAATCCAGATTGGACGGCT 455 35 100.0 30 ................................... GTACTCGGAATATATTAAAAACGGTGGTAC 390 35 100.0 30 ................................... TAAAAGTTGGTGTAAAATTCAGCCCGTGCA 325 35 100.0 30 ................................... TCGTTGTTCCTCCAAAACTTACAATGTCAA 260 35 100.0 30 ................................... CGTGATAAGTATTCAGACAGCAGACAGTCT 195 35 100.0 30 ................................... CATCTGTTCAGTGTAACCACCCGTGTTTAT 130 35 100.0 30 ................................... TGTAATAATGTTACCACCTTGGTCTGTCCA 65 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =============================== ================== 10 35 100.0 30 GTTTTAGAAGTAAGTCATCTCAATTACTAAGAACC # Left flank : GACTTGACACAGTATGAGATAAATTCGACTGCCAACTTAAAATACGTTTTCCAGAAAGCTGTCCAAGACTCAGCTCTCTTTAAAGACAAATTAGAGTCCATAAACAGTCAAATCAATGATATTGTTTTCGACTCTGTTACGAACTATACTGCCTCTCTGACATTTGACCCCTACTCTGATTTCGAAAAATTACTCAAAGTAAAAGATGTTCGTTTAGACAGTAGTAAATGGGAAAATTATTGTGATAAAATCATTAGTATAGTAAGTTTCTATGTCGAATTTACTAGTAAAAAATTACTTCTATTTCATAACCTTGAAAAGCTATTAAGTTTTGATCAATTAAACGAATTGAATGATTATCTAAAATCCGTTGATTTAGTTATTGTCTCTTTAGAATCATATCCGTTAGAGTTGAAGGAAGAAGGCCTTGATATCAAGGTTTACTCCATTGATGAAGACCACGTTAGATTTGATTATTAGAAGATAACTAATTTAAGACG # Right flank : CTATTCAAACAGGGGTGAAGATATAGCCTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTAAGTCATCTCAATTACTAAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //