Array 1 472999-474156 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035154.1 Pediococcus acidilactici strain SRCM103387 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 472999 36 100.0 30 .................................... AACAATGTTCGGTACCGATGCGGTTCGTGC 473065 36 100.0 30 .................................... GAAGCGGACATTGCTTCGGCAAAGGCGGAA 473131 36 100.0 30 .................................... ACCAAGCCATACCGCAGTAATGAAGGACGC 473197 36 100.0 30 .................................... TGATTGATTAATCAATGTTTTAAGAATCGG 473263 36 100.0 30 .................................... CTCAAATTGTTGAAGCGAATATTAAGTTCG 473329 36 100.0 30 .................................... TCGGGAATGTCGTCAACTTCCGTGGCGTGT 473395 36 100.0 30 .................................... CTACTGACTACAGCCTAACCCTAGGCTAAC 473461 36 100.0 30 .................................... ACGTAGTCGGCATTATTAATACGGTATTGA 473527 36 100.0 30 .................................... GAAGCAAATAAAAACACCAAAAAGGCGTCT 473593 36 100.0 30 .................................... AAGATTGATTATGCAAGAATGACTGAAAAA 473659 36 100.0 30 .................................... CCCATCAACAACCTAACACGGGGGCAAGGG 473725 36 100.0 30 .................................... TTCATCATAATGTTGAATATAGGTATCCCT 473791 36 100.0 30 .................................... TAGGCAGTGTTGCATTTGCCGCAATTCCGC 473857 36 100.0 30 .................................... GATAGGCTTGGAAATGATAGATAACAACAT 473923 36 100.0 30 .................................... ACCGAGAAGCAATACTTTGTCCCCTCATCT 473989 36 100.0 30 .................................... ATTTATCATAATTATATCCACTACTTAAAT 474055 36 100.0 30 .................................... TCCCATCCTCCCAAAGCCAATTCGAGCGGA 474121 36 97.2 0 ..................................G. | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.8 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAGGACTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGATGGATGAGCAACGTAACCAAATTCATGATCAGGTAAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTGATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CGTGGCTGGTTAGTTTGGGTATCTAAGGGAGTTTTCAGAAGGGGAATAAAGTTAAATGGAAGTCATAAAAAAGAGCCAAACAAGAATGAAAGGTTAACAATATTACTGGCGGTAATACAAACCATAATAAGAACTCTAGATTGGCTCGGGTACAGTTTTAAGAAATAGGATTAAGAGACGTAGATCTTTTTTGCCGCTCTCTATATATATTTTATAACGGAGGAATAAAAAAATGAAAAGAGAAAAAGCAGTTAACATAGTTATTGTATTGCTGTTAATTTCAATCGTGTTATCTATTTTAAATCTATTTAAGTAGGTGTGTATCGTGAGTTTAATAAAGAAGCACCTAGATTCTTATAGGATTGCTAAAGATAATAATATTACCTAGCCAATAATGACAAGGGGAATTAATAAGGACTTGGATAACTTATCGTTTAAGCATCTTAAAGCTATCTCCACTTCCCTAGGAAAAGATATAGTAACTTGTCGCAAAAGAATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //