Array 1 33254-31835 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMXM01000011.1 Streptococcus salivarius strain BIOML-A33 scaffold11_size56396, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33253 36 100.0 30 .................................... AGTGAAGCTGGGTGGAAAGAGAACCCTCGG 33187 36 100.0 30 .................................... GGGATGTCATTCTCTACTACCAGAACAGCT 33121 36 100.0 30 .................................... ATAAAATTGACAGTGAGGGTAACTCAACAA 33055 36 100.0 30 .................................... TTCAAGATTCTCGTGGGATTTGGTCCGATT 32989 36 100.0 30 .................................... AGCACCAAGCACACAGCTATCTTCTGATAT 32923 36 100.0 30 .................................... AGTCGAGAAGCTCAAGAGCGTCTTTAGTTT 32857 36 100.0 30 .................................... CTGACATGCGTGAATTCTTTAAAGAGTATC 32791 36 100.0 30 .................................... TTCAACAAGCATTGCCAGCGATTGGGTATG 32725 36 100.0 30 .................................... ATAGCGTCAACATCGCCATCAAACACTTTA 32659 36 100.0 30 .................................... CAGACAGTGCTGACCCTAAACTTCCTACTC 32593 36 100.0 30 .................................... CAAAGCGTATCAATGTCGTCATTTAGTTGT 32527 36 100.0 30 .................................... AAGCATCTACTCCTTTTAGTCGTCAACACG 32461 36 100.0 30 .................................... TCTTTCAAGATAATAGAGTTTTTAGAAACA 32395 36 100.0 28 .................................... CGAGCGCCTGCGAATGTCACTTGTTTCA 32331 36 100.0 29 .................................... GTATTTGAATACTGTAAATTATCACAGTT 32266 36 100.0 30 .................................... TGCAAGCGGTGGCAAACATCTATTCTACTT 32200 36 100.0 30 .................................... GACACAGCAGTGTTCTTCTTTTACTTTATC 32134 36 100.0 30 .................................... GTGAAGTGTTTGATAACCCTATGTTTGAAG 32068 36 100.0 30 .................................... ACGACCGTACTTTCGAGCGTGCGTGGGTTC 32002 36 100.0 30 .................................... AAATACCGATAAGACAATCGTTTTGCTCAC 31936 36 100.0 30 .................................... GTTTTGGTATGGTTAATGCTTTTCTTTTAG 31870 36 88.9 0 .............................A.C..GG | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.5 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTATTTCAGAGAAATCTTATGATAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTTTGTTTCCGAGTGACCAAGGCTATTTAAAGATTGATGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGATCAGGTGGAGCATTTGTATGATATTGAGTTTATGTATGAAAGTGTAGCGAAATATTATCCAAGTAATAATTTTCCAACGAGAGAGGATTTTAGGATATCCTTAGAGACCGTAACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCACACTTGTTGATTCTGTAATTTTGAATATTCTAAATCAGCTGTTTCAATTTAATTACCGTATAAGATATTCACAAACTCCTGATGAGGAGTTATTGCATAGATATTTAGAAAGTAAGAATTGACAAGGACAGTTATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTGATTGATTCAACTTAAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACGCGATAAACATAAGGGTTGTCAGGTTGACCAACCTCTTTGACCTCAGTCAAATTGAGGATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTATCCTTGAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATCCCAAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAAACAAAACCGGTATAGGTGACCTTCTTGCCTACGAAATCGTTAGGATAGAGGTAAATGAGCTCCATGACTTCCATGTAATTTTCTGTGGTAATCTGGATGGTCTCACGTCCCCTGTACTTGGTGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTTAAGTACTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //