Array 1 208537-209609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARUF010000001.1 Listeria booriae strain FSL L7-1071 NODE_1_length_566296_cov_13.516147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 208537 30 100.0 34 .............................. TAAATCGTTGTTTGTATGTTATTTTATATACTTT 208601 30 100.0 36 .............................. ACGAATTCACCGAGGGACTGCATCACCCTAGAAGGC 208667 30 100.0 35 .............................. TTATTTTTCATATTACCGGAAATACCCTTACTTTT 208732 30 100.0 36 .............................. AAACTATAGTAAGAGAAAGACACGTCCACGTCATCA 208798 30 100.0 36 .............................. TCACGAATCATGGCAAGTTTAGGTGCCTTTGTATCA 208864 30 100.0 36 .............................. TGATTCGTGATGGTGAATGTATCTGAAGGCTTTTCT 208930 30 100.0 36 .............................. CACCTTTTGCACAAACGATTTTAAATAGTCCAGTCC 208996 30 100.0 36 .............................. TTGCATGCTTCAATTCCAAGGGAACGGGCTTCGAAC 209062 30 100.0 36 .............................. CTAGATTCAAAATCATTTGTTAGTCTTTTAGACACA 209128 30 100.0 34 .............................. AATAAATTGGGTCACCTTTGTGGTTATGTAAATA 209192 30 100.0 35 .............................. GTAGCCCGCTGTGATAGCGATATTAGCTCCTTTTA 209257 30 100.0 36 .............................. CAACTTATAGATTGTCTATATGGTATTGGCATACCG 209323 30 100.0 35 .............................. TTTAACACATAGCCATCAATTGTTTTTGTTTCTAG 209388 30 100.0 34 .............................. GTTACTTTAATTATTACAGCGCTAACCGCGGCAG 209452 30 100.0 34 .............................. AAGTCATGTGACGCTGTAATGTAATCTCCGACTC 209516 30 100.0 35 .............................. TGGTTTGGAATTCCACCATCTTTTATGAATGCCAT 209581 29 86.7 0 .................A..-...C..G.. | ========== ====== ====== ====== ============================== ==================================== ================== 17 30 99.2 35 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : TGGCGAAATGGCCGGCGATCAAACAGCTGTACCATTGTTGTTAGGAATGGGTCTAGATGAGTTCTCTATGAGCGCATCAAGCATTCTAAAATCACGTTCATTAATCAAACGTCTAGATCGCACAGAAATGGCGAAATTAGCGGACGAAGCACTACAACAAGCTACAGAAGAAGAAGTTGTAGCGTTAGTTAATAAATATACAGCGGAATAATTTCATTGTTCGGAAGGCCCGAGGATTTTCCTCGGGTTTTTCTTTGTGGGGAAAGAGGGGATGGTTGATAAATGGTGTTTGGAAAGCGAGGATAGAAATCTGTCGACCGTCGGTAGTGTGGAAATTAGGGGGCATCGACAGATTTTTGTTAAGCGTTGGTGTGCAAGGGATTGAGCCTATTTTTGGAGTTCGGGTTGTAAGGTTTGGGAGCGGAAATTTAGGATTTGGTTGTCGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTAGGTGTTGATGGGGTACCT # Right flank : TTAGATTGCTCACAGATGCAGTGTTTCTATCCATTTTTTACAGAAGCAACTATCATTTAACAGCTTCCAACCAACTCCATTTGCATTTTTACTCCCCCAGATGTACACTTTGTTTAGAAGCGAACTGTATAGAAGGAGGAGTTTTTGCGATGAAGAAAATTGGGTTTATTGGTGTTGGGGTTATGGGCGCTAGTATGGCGCGGAATTTGATGGCGGCGGGGTTTGAGGTACATATTTATACGCGGACGAAAAGTAAGGCGGAAAGCGTGATTCAAGAGGGGGCAATCTGGCATGAGACACCGCAGGATTTGGCGCCTCAGGTCGATGTGCTCATCACGATGGTTGGATATCCGACTGATGTGGAGGAGCTTTACTTGGCGGAGGACGGGCTGTTGACTACGCTTCGTTCGGGAGCTATTGCTATTGATATGACGACTTCTTCTCCGAATCTTGCGAAACAAATCGCCGAAGAGGGCAAGGCGCTGAACATTGCAGTGCTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 44053-43170 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARUF010000011.1 Listeria booriae strain FSL L7-1071 NODE_11_length_111883_cov_12.226678, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 44052 30 100.0 36 .............................. GCCACTATCATCCGTATACGTAATCGATTCATAGTG 43986 30 100.0 36 .............................. TTGCAACCATGGCAGTTTTGTGTTTAGACTCTAAAT 43920 30 100.0 34 .............................. ATTTAAAGAAAGGCATCGTGCCAGCAAACAATGG 43856 30 100.0 36 .............................. CACAGCGTCGGCAACTTCTTGTTTGTCGGCTTTGCC 43790 30 100.0 34 .............................. CCGTTCGCTTTTGTGGGCTTGCAGGGCATGCAGA 43726 30 100.0 34 .............................. TGAATACGATACCGTCCGTTAGACTGCGACTCAT 43662 30 100.0 36 .............................. TTGAAGCAGACTTCGTTTTTGAAGGCGTGGACAACG 43596 30 100.0 37 .............................. TATACATCTTTATCATTCCAAGAAGCTTTTGAATAAT 43529 30 100.0 36 .............................. AACGGTTCTGGAAGCAAGATAATGGCAGGGTTACAA 43463 30 100.0 36 .............................. GGGGCTGAGACATATGGTTACGATGTCGCTACGCGT 43397 30 100.0 36 .............................. ACTTTTGCGATGCCTTCACCTGCCTCTTTCGTTTTA 43331 30 100.0 36 .............................. ATAAACGGGCTGACATTTTTAGCAGTGTTAAATTCA 43265 30 96.7 36 .............C................ GATTACGATGCATCAAATCATGTTATTGCCAGTATT 43199 30 93.3 0 A....................G........ | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 99.3 36 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : AATGTTCCACCTCGACGAAGCCAACTGGAAACTGCATAAAAAAGACATCATCAGCAATTCGAAAAGCTGGGAACCATTCCAAAAAGAAGCGTTACAACATGAAATGAGCAATTTTGAAGTGCTAGATAAAGAACGCCTTGTTCAGAAAACAACATTCGGCGCGAATCTACAAGTCATAGCGAATTTCTCGAACAAGAATTTTGAGTACGAAAAGAAAACCATTCCTGCGAATAGCGCGATGATTGTGCAAAACGGGAAGAAAAAGATAATTTCTACAGATAATCTTGATTCGTAATAACAGGAAGAAAATCTGTCGACCTCCAGTAGTGCAAAATAATGGGGACATCGACAGATTTTTGTTATGTATTGATACTAAAGAGGTTAAGCCTGTTTTCGAAGTTTGGGCTGTAAGGTTTGAGGGCAATAATTTAGCATTTTGTTGTCGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTAAGTGTTGATGGGGTACCT # Right flank : GTCAGCGAGGCATATTTTTCAGAGTTGCAAAACAGGTTTTATCTAAAGTAGGAGTTAAAACATAATAAAACGAATTGAATAACAAGAGGGTTAATATCCATTTTTCAGTATTAATGGATATTAACCCTCTTAATCTATTGGCCTCTCTGATGAAAATTTTTAGTATGCAATTATCTACTCAAACTAACTACTTTGGTATCAAGCACGTTACCATTGATATCGTAAGCAGTGATGTGCGCGCTATCTGTCGTGTTAAGGATGACCGTTTTTGCATAATATTTAATAGCTGGTGCAGTAACGGGGATTTTAACGCCTTCTACACCATTCACAGTAAGGCTAATTTTCGCTACGTCTCCAGAGAATTGACCAGTAACATAGCCTTCTTTACCAATTACAAATGGAGCAAGTGTGGTGATAGAACCGGTTGCTACTATTTGACTTGCAAGGGTAACAGTTTTTGTGTCTAGTATTCTACCATTGGCATCATATGCAGTTAGTGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 47526-47300 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARUF010000011.1 Listeria booriae strain FSL L7-1071 NODE_11_length_111883_cov_12.226678, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 47525 30 100.0 36 .............................. CACGAAGATTTGAAGTACACATTCAAAGAAAATATT 47459 30 100.0 36 .............................. ACGCATAGCTCGTATAATCTGGAACTTTCGCTTTAA 47393 30 100.0 34 .............................. TTCTCTTTTTATAGCTGCCCTAATTGTCATCAAA 47329 30 83.3 0 ....................C..CA...TC | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 95.8 36 GTTTTTATCTAAGTAATGTGTAATGTAAAT # Left flank : GATGCTGAGCGCAATATCAAACCAGTACCGAATTCCGAGAAAATTTGGGATGCGGATATCGTTCTAATTGCCGTCGGATTCGCCGGCACAACCAAGTCAGTATTCGAAGACTTCCAAGTAGCAAAAACAAACCGCCACACAATCGATGCTAGAAAAGGTTTTTACCGTACCAACGTAGAAGGCGTCTTCGCATGTGGCGACGCAAGATACGGCCAAAGCCTTGTTGTAACAGCGATTAACGAAGGAAGAGAAGCCGCCCGCGAAGTAGACTTCTATTTGATGGGCGAAACATTCTTACCATGATAAAAAATCTGTCGACCTCCAGTAGCGTAAAAACTAGGGGACATCGACAGATTTTGTTTTTGCTTAGGGGGAGAAGGGGTTAGGATGGTTTTCGAAAAGTAGAAAAAAATAAACAGGTGCAAAAAAGATAAATTTCTTGGAGGTCGACAGATTTGGGGTGTTGAGGTATGATGGGAGTAGGAGTTAAGAGGGTACCT # Right flank : CCCAAAGAAGGAGAGACACCAAATGACTATGGAAAAATTAAAACTACGAGTTACCATAGACAGACCTATCGGATTTAAGGACGACTACGGAAATACATACCCAATAAACTACGGATTCGTTCCCAGTGTCATAGCCGGAGATGGCGAAGAACAAGATGTTTACATAATTTCTAAAAATGCAACAACTCCACTTGACGTATTTGAGGGAATACTCGTCGCGGTCATACACCGGAAAAATGATACCGAAGACAAGTGGGTGGTTACTTCAAAAAATGAATTATTATCCAAACAAGAGATATCCGAAAAAACGCGTTTTCTAGAGCAATACTTTGATTCCGTTATCGAGCTTCTTTAACAAATACAACGGTACAAACGCTCACCTTCTCACAAAATACCTAAATAAAAGATGAATCACTATTAAAAACAGTACACTAACCATGAAAAAACCACTCGATATCCAGTCCATAAAAAGGGATACAAATACTAAAATTACGAGAACC # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 55663-56934 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARUF010000005.1 Listeria booriae strain FSL L7-1071 NODE_5_length_295290_cov_14.961709, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 55663 30 100.0 37 .............................. ATATCCGCCTGGCAGAAGTCAATATACATTAGCTCCG 55730 30 100.0 37 .............................. TCGGATATAGCCATTTTGGAAGTGCGTCAAGGCTATC 55797 30 100.0 36 .............................. ACAATACGAAATCTGCCAGTTTGTCCATGAGCGGGT 55863 30 100.0 37 .............................. TTCGTATATCCAATCATCTAACAGGTCAAAATCTATC 55930 30 100.0 36 .............................. ATGAGTTTAGCTTCTCGATTAATTTCGTCCCTTATA 55996 30 100.0 35 .............................. ATGCTGAAAACAGAATGAAGGAGCGCATTTATCGT 56061 30 100.0 36 .............................. GAGGAACATCGCGGTATTGGAACCACAGGCTAACAC 56127 30 100.0 35 .............................. TTGCTTCCTTAGAAGATTATGGGTTTGATGGTTTA 56192 30 100.0 36 .............................. TATCATCGCAAAGGGCGGACGTTCTTCCATGAAGTC 56258 30 100.0 36 .............................. TCAATCTTGCCAGTCACATCATTACAATAACTTTTC 56324 30 100.0 36 .............................. ACGACTTAGGCGATGTCGGGAAGAAAGATGTTGATA 56390 30 100.0 35 .............................. AGTCGACTTTTGTCACTTCTGCTATCCAGGTATCG 56455 30 100.0 35 .............................. CTGCTCGCTTAAATTAATCCAGTCGCGGATAATTT 56520 30 100.0 36 .............................. TAGATATTCTCCTTTACAATTAGATAAAACGCTCCA 56586 30 100.0 36 .............................. AGTTTTAACAAAAATAGGAATTAATAATAATGCAGT 56652 30 100.0 36 .............................. GAAGCGAACTACCAGGATAAAGTGGCGGGTGTCATC 56718 30 100.0 35 .............................. TATTTCTGTAATGACAGACATTGGCGGACTGTTCG 56783 30 100.0 35 .............................. TCGCGATTGCAAAAGACTATCTACCGCTCATAGGA 56848 30 96.7 27 ........................A..... TAGGAGAAGGGCGCACTTATACACCCT Deletion [56905] 56905 30 70.0 0 ......CC.G.....C.A.....CA...CA | ========== ====== ====== ====== ============================== ===================================== ================== 20 30 98.3 35 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : AAGATTTGGTGGTGAGGTATGTATATTATCTTGATTTACGACATAGCAATGGATAACGGCGGTCCGAAAGTATCGAGAAACATTTTCAAAATCTGCAAAAAATATTTAACACACGTGCAAAAATCGGTATTCGAAGGCGAAATAACCCCAGCACTACTTGCCAAATTGCGAATGGAGTTAGACCAGTATATTCGTGACGAAGAAGATTCCGTCATTGTGTTTTCTAGCAGAAATGAAAGATGGCTGGAAAAGGAGTTTTGGGGCGTTGCAGATGAGAAAACATCGAATTTCTTTTAGTAGGTAGAAAAATCTGTCGACCCCCAGTAGTGCAAAATAATGGGGACATCGACAGATTTTTGTTAAGCATTGGTGTGATTGGGTTTAAGGCTGTTTTTGATGTTCGGCTTGTAAGGTTTGAGAGCGGGAATTTGGGATTTGGTTGTGGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTAGGCGTTGATGGGGTACCT # Right flank : ACGGTCTGTTTAGCTACGATTGCTTTGGCAGACAATCTCAGTCTACCAAAGCAATGTTCGTAGCCAGTATACGCTACTTTCCAGTCCTCACAAAAAATCCTCACGATAATCTTTAACATACTGATCAAACGAAGTAGCCTCACGGTGCAGCAATTCCTGTGCTGTTGGGGTTATTTGTTTTGCGTTTCCCATTTGGGTAATGAAGTAAAGCATGGTCATGACGTTGGCGAATGCTTTTGGGGTTCCTCGTTTTATTATGGTTGCGCGAAATCGTAATAGGGACGGCTTGCTGTATGTTATTTTTCTCCCTAGAATGGTTGTCATCTTCTCTGCCACCTCATAATACGTCAATGCTTCTTTTCCGGTAATACTATACTTTTGTCCGCTATGTTGGGGTGTATTCATCAGGCAAATAGCAGCGATCTCCCCAATATCACGCGTATCAATAAAGCTCGTCCGCGCATTGCCCGCAGGAATGAATAAATCGTCATGTTTCTGAA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 134817-134253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARUF010000008.1 Listeria booriae strain FSL L7-1071 NODE_8_length_186833_cov_18.222638, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 134816 36 100.0 30 .................................... TTTATTAAAAATCCAGCCACATTTTTAAAT 134750 36 100.0 30 .................................... AAATATGTGTTATATGACAGAATCTTTTGT 134684 36 100.0 30 .................................... ACAGTAAGACGTTTCGAAGTAAACAGTCTC 134618 36 100.0 30 .................................... GTTAACCCAACTAAGAATGGTGTTAAAGCA 134552 36 100.0 30 .................................... ATGCGCGATTCTACATAGATAATTTTAAAG 134486 36 100.0 30 .................................... TAAATAGTGTTCTCAAGTTCTTCAAGATAC 134420 36 97.2 30 ................A................... TCGATACAAACGCATACGATTTCACGCTAG 134354 36 100.0 30 .................................... AAAACCATACGGAATGCTAATACACGTCAT 134288 36 86.1 0 ................A..........T.T...TA. | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 98.1 30 GTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATC # Left flank : CATCAGAATATTGTACAGCTATCCCCATATCGAATATCTTCGAAAAATCATCAACACTCGGCAGTTTCTTTGTACTAATGATTTCTTCGTCTTGAAGTGTGATAGGTAACGCCTTGCTACCGTCTTTCTTCAATAAACGTATAACCTCATCATTTTTGAGAAATGGTTCTAGTGAGTCTTCCAAGTAAAAAACATCAAGAACTATTTGCTCCTCCTTTACGAAGAGGTAACTTTCTTGGAACTCCTTGTCAAAAATAGAATTGAATAGCTCTAGCTCTACTTCATCAGACTGTTTTAGACTGTCTCGTGAGTCGAGGAAGAAAGTAAGTTTTATCATTTTTGCACTCCTAACTGCTTTCGAAACTAAAATAGGATACATCATTGTTTTGCAAGTAAATACTGCTTCATTGACTACCGATTGGATGAGCATCACTTTGAATGCTCTATTTTCTATGGCTACTAGCCTCCGATTAATTAGAAATAACTTATCCACAGTAGAG # Right flank : TTTATTCTTTTATTAATAATTGAAATACCCTACGTCACATCTCCAATAGCGCCTTCACAATACTACAATACTCTTCTGAAACTTGATTCGTTTCAATATAACTATCATTTAATTTTTTCCCACTTAAATGTCTCAATTTTTTTGGTTTTAGGCTTGCTATCACCAATCTGTGTTTATTGTTTTTCAAGTTAGCAAACACAACACACATACCATGCTTATCTAAAAGATCGATTAATGATTTAGTAACTGCGTTCTTTAATTTGCGGTCATATTCAAGCATTTCTCTTAATTTCTCGAATAAATACAATAACGAATATTTATGTTTTGGTGATAAATAATTTAAATGTGCTATATAGTTCCTTCCATTTTTCTCAGAAACAAATAGCCCTGCCTTGTTCATGAAAATATCCAGCTTTTCAATATAATCTGGCCTGTTTTTTCTGGTAGTATTAATCCAGCTATCCACTCTTTCGGTATGTCCAGAACTCTTTAAATATTGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //