Array 1 375101-375494 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOSA01000001.1 Klebsiella quasipneumoniae strain NFIX21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 375101 28 100.0 33 ............................ TAAAAATGCGTACATTAAACGTTTTCACATTTA 375162 28 100.0 33 ............................ CAAACGAGGTACACAAAATGACATACGACGATA 375223 28 100.0 33 ............................ CAGACGGATCCGTAAAAGGCAAATTGCTGTGTA 375284 28 100.0 33 ............................ CAGCCCGGCCCGTCAGAGGCTGATTGCTGTGTA 375345 28 100.0 33 ............................ TATCATGATGCGTACCGAGTGGGGGGCTTCGGT 375406 28 96.4 33 ...........A................ CGCAGAAAGCACGCTGGCTTCTGCTATCAGCGC 375467 28 82.1 0 ...........A..........G.C.CG | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.9 33 GTCTTCCCCACGTGCGTGGGGGTGTTTC # Left flank : GGTCAGCGTCGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTTGACGGCGCGGCGCGGGATAACAGTCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGCACCGAGGGCGACGACTTTCCGCTACGCGCCTACGGAACCGCGCTGCGCGATGCTGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACCACGAGAAGCCACGGAAGGCAAGCGTCAGGTTATAACGCTACGCTATGGGATGACAAAAGCACTTTGCGTCCGGCTATGGGCCGGGCAGGCCAGTAGGCTAGACCGATCCTGGTCAGCAGCCAGTCGACGGTGGTGATAAGGGGAGATACTTTTTCGTTTGATGAATGTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGTGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : GTGACCGTTTATCTGATGCAGACGCATCAATGCGTGACATTATGGTCCTTAACGTACATCAATGTCTTCGATATTTCGTTTAGCCAGCTCCGTCCTATATAATTTTTATATGATTTCACTTATAAATATTCGTGAACTGTGTTTGTTTTATACTTTCTAAAATGACGTATAAAGCGTTAGACTTTATGACTCATCTGGAGATATCGCTCTCCCTATTAATTATTTTTAATTTTTATATTATTATTTTAGGTTTTTATAATAAATTCAGTCTGTTGTGTGTGCTTTTTTATTTTATAAAAAGTTATTTATAAATCCCCCTATTTTTAGTATTAATAAAGGGCACATGATTTTTAAGGAAAAATTCCATGAGGCGCTTAACCAGGGTTTCGCTTCAAAATCAACATGCCACCGCGGCGATAAGTTATGAAAACTGCCCAGCGAAAACCCGAAGGTTGAATGATGGCCGCGTGGTGCAGGGACGCTCGGTGTTGAGCCATTGT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-11.70,-11.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 384200-385144 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOSA01000001.1 Klebsiella quasipneumoniae strain NFIX21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 384200 28 82.1 32 .....................TGT..CG AAGACGGGGTGGTAGTACCAGGCGTCCGGGTC 384260 28 100.0 33 ............................ CAGAATCACCGCGCCGCCGCTGAAAAACTGATC 384321 28 100.0 33 ............................ TACTGGCTGGCGTACGTATTGCGATAGCACGGC 384382 28 100.0 33 ............................ CTGGATGCTTCGCTCACGGTAGTAGCGAACGAG 384443 28 100.0 34 ............................ TGGCTCACAGGACGGCGTAAAGGGGGATTTTGTG 384505 28 100.0 33 ............................ TCCCGTCCGGTAGCAGACCTAAATCCTGGCGAT 384566 28 100.0 33 ............................ TAAGCCAGAACCTTTCCGCATCCTCGATCGCCG 384627 28 100.0 33 ............................ TGCTCCCCACATCGCACAGAGGTAAGACATGTC 384688 28 100.0 33 ............................ TATCCCCTAGAATATAGCGGCGATAATTTGTAT 384749 28 96.4 33 ..........T................. TGTCTGCATGAGCGGTTAATTGAGGCCGGAGTG 384810 28 100.0 33 ............................ CAGTGGCGGGATAAGCAGACTGGAGAGCAAAAA 384871 28 96.4 33 T........................... CATGGCACATTACTGGAGAGACTGACTCATGGC 384932 28 100.0 34 ............................ CGAGCAGGGGAGCAACAACGCGAGAGACAGCATG 384994 28 100.0 33 ............................ TGAACAGGAGAGAGACGATGCGCCTGAGCATGA 385055 28 100.0 33 ............................ GGTCAAAACCGCGGCCCCGGCAACTCAACGGGA 385116 28 82.1 0 T......A....TC..........C... | C [385137] ========== ====== ====== ====== ============================ ================================== ================== 16 28 97.3 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAGCGGCTCTGTATCGATCTGGCGTTTTCGCTGTCGAGGGAGATGGCGGGTCGATATGATAAACATAAAGTTTCTGAGGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCCGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATTTGCCGCCAGCGGTTCGTGGACGAATGAAGCTATGGTTTGTCGAACCCCGGCCAAATGTTTTCGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTATCTGATGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAATATTCCTCAGCCGCCTGGTTATGAAATTCGCTACAAGGGGGAGGTCAGAAAGCCGATTATTGAGCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATTCGCGGATATAGTGGTTGAGTTGATGCTCTTTGACAATATGTTGGT # Right flank : CCGCTCAGCTTACCCCGCCAGATGGCACACGGCTTCAATATTGTGCCCGTCTGGCGCAATCACAAAGGCGGCGTAGTACCCGGCGTGGTAGTTGGGCCGTAACCCCGGCGCGCCGTTGTCCTTTCCTCCGGCGGCCAGCGCTGCCTGCCAGAAGGCGTCTACCTGCTCGCGGCTGTCGGCGCGAAAGGCGATATGCAGCGGCGCCGGTTTGTCCGCACTTTGATAGAGACACAAAGAGACATCGCCGCTGCCCGCCAGCTCTGCGCCGTAGGTCGGCTCGCCTTCATCGACCAGCGTTACGCCAAGCGGGGCCAGAGCCTGTAAAAAGAACGCTTTGCTGGCGGCATAGTCGCTGACGCCGAATTTCACATGATCGAACATCTCTTCTCCTGTGGACGGGTATCGCCAGCCGAACGCGTTAGCCGGGAAATAGATGCAAAATAGTTAACAACGGGTAGTAACTTTTTTAACAGCTCAAAATGTTTAATTATTCCTAATAC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //