Array 1 208862-207572 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJKN01000005.1 Akkermansia muciniphila strain GP43 scaf-5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 208861 36 100.0 30 .................................... GGTCAACACCTCCAAAGCCTTCAAAGGCTG 208795 36 100.0 30 .................................... GGAGACGCGGATGAAGCCCTCGTCTGCGTC 208729 36 100.0 30 .................................... CCCGCCGTCACTATCTCCCTCTACATAGGC 208663 36 100.0 30 .................................... TGGCACCGGAATCCACCTGATGACGTCTCC 208597 36 100.0 30 .................................... TGACATGAGTACCGCGGCATACGGGTTACA 208531 36 100.0 29 .................................... CAACCCCCTGAAAACCAACGAAAACGGCA 208466 36 100.0 30 .................................... AATATCGCTATAATATCGCAAAAAGATATA 208400 36 100.0 30 .................................... GAAGCCGTTGAAGCTCTCTATTGCGGCCCC 208334 36 100.0 30 .................................... TCATATGGTTATGTCCCCGTTGCCTGGTTG 208268 36 100.0 30 .................................... AGATTTATCCGCCGCGGTAGATAGCGGTAA 208202 36 100.0 30 .................................... ACCGCCGGTTAGGAGACGTCAATTATTTAG 208136 36 100.0 30 .................................... CCGGCGTTAGTGCAAGCCTAAAAGCTGTTA 208070 36 100.0 30 .................................... GTTCATGTTAATAGCCATAAGTTTTTGATT 208004 36 100.0 30 .................................... ATCTATTTAGTTAGTGTTTTGTTCTCCGGG 207938 36 100.0 30 .................................... TTAGAGCGGCGTAACTTTTCAGCATACTGC 207872 36 100.0 30 .................................... GACGCCGTTGAAGCTCTCTATTGCGGAGAT 207806 36 100.0 30 .................................... CAACCTTTTGCTTTCCACCCTGTCCGGCAT 207740 36 100.0 31 .................................... TATTAACTATTCCCGCTCTAAAAATGATGAG 207673 36 97.2 30 ...........T........................ TGCCTCTCTCCGGTCGAAGAAACAACTGAC 207607 36 94.4 0 .............................A.....T | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.6 30 ATTGTACTGTGCCTTATTTTGGATTCAAGGCAAAAC # Left flank : TCTGTTATGCACCAGAACAAACAGATGCCGTTGAAAGCGGCGGTAGAGGCCGTTTGCCGCAGTTTCCGCAAAGCAGTTCTTGCCGGGCAATCCGGACCGTATGAACCATGGCATATGACAACTATAAAATGGGCTGGCTAGTTGTGTTCTTTGATCTTCCCACAACCACGCCGGAAGATAAAAAAAACTATCAGTATTTCCGTAAGGCTCTTTTAGAAGACGGCTATACGATGATTCAGTATAGCGTCTATGCCCGCGCGTGTGTTACTCAGGAAAGAATAGCTACCCACTCCCGCAGAATCCAGAAAATGATACCGCCTGATGGTTCTGTCCGCTGTCTTTTCGTTACGAATATCCAGTGGGATAAGATGTTCGTTTTTCATGGCAGGTCTTGTCCCCGACAGGAGGTTTCCCTTCCTCAGCAGATGCTCCTCTGGTAAAAATATCGGACGCCGTATTTTTTTATAAGTCGCTGAACATAAAAATAAGGCACAGTATCT # Right flank : AAATACGCCTCCTGTTTGATGACGCAGGGGGATTGTCCGTCTTTGGCTGCGCAATTCCAAACGGATTTTTGTCAGTCTTTTTTTAACGGAGCGGGAGGAATGAAGCTGTGCGTCCAGAACATGGCGCCGGTTGCGGAGGTGATTCCGTCCATGTTAAGATAACGGGCCAAAAGCAGGGAGGGGGAGGAGTGCCCCATCTCCTTCTGAAGAAGGTTTTGATTGCAGAAATGGGCCAGGTGGTAGGAGGCGTAGGTATGCCTCAGCACGTCCTGCACCCATCCGCTTTTTTTCAGGATGCCGGACCGGCGCCTTACTTCCATCCATTTCTTTTCCCAGTTGGGCGGGCAAACGGGACGGGAGGGGGAACCGGCGGAAGACGTCCGGCTGAGGATGGCGCCCAGCACGGGAAGGATGGAAACGTGGCGGCTCCCGCCTGTTTTGGTATGGCTGGGCGCCAGTGAAACCAGGCCGGATTTCAGGTTGATGTTCTTCCAGGTCAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTACTGTGCCTTATTTTGGATTCAAGGCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //