Array 1 1349141-1350888 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAIA010000002.1 Chitinophaga varians strain Ae27 Ae27-scaffold_2_length_2184126_cov_115.835, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1349141 30 100.0 35 .............................. TTGTTGGTAAAGCTCCATGTTCCGGGCAATCATTG 1349206 30 100.0 39 .............................. ATTGTGATCTTTGTATTGTTGTTCGGCCGCCTGCTGTTT 1349275 30 100.0 36 .............................. ATCATCGCAGGTAGCTGACTTCTTCACTGCGAAGCC 1349341 30 100.0 36 .............................. AGTATAAATTCCAGAGGCCTTACGTTGGCCAGGACC 1349407 30 100.0 37 .............................. TATAATTGGGATTACCGTGGCGTAAAGGCTGACAGTA 1349474 30 100.0 36 .............................. TTGATAAGCGCAGAACCCTTGCAGGCAAGTATTTCC 1349540 30 100.0 38 .............................. GAGATAGAAGACAGGCATCCAGACAGTGATATTGAGAT 1349608 30 100.0 36 .............................. ACAGATGGCTGTTGGTGCTGGCATTCATCCCCGCAG 1349674 30 100.0 37 .............................. ACTCTTCTGTTAAAATGAGCGGCATCCGGCCCGCATA 1349741 30 100.0 37 .............................. GTGATTTGCGCATTTGCTCTAATGATTCGCTTTGGTC 1349808 30 100.0 34 .............................. TACATTTTGAACTTGTCTCCATTGACACACAAAT 1349872 30 100.0 35 .............................. AACAAGAGCACAGGACGAGAAGTGAGGCCCGCGAC 1349937 30 100.0 36 .............................. TGTGTAGCAAACGCGCCTTATCGAAAGAAGATGCGC 1350003 30 100.0 36 .............................. CTGAAATGTAATATTGTTCGTCATTGGGGTCAGGCA 1350069 30 100.0 36 .............................. CTGAAATATAAGTCTACTTGGATGGGGGAAATGACT 1350135 30 100.0 35 .............................. ACAATTCAAATGTCAGTTCCCCTACTTTGAACCGG 1350200 30 100.0 36 .............................. ACATGAAGTATTATGACTACATGAAGACTGCATTCG 1350266 30 100.0 35 .............................. TTGCCAGTTCCTCCGTGAGGACCAGCGGCATACGG 1350331 30 96.7 36 ..T........................... TCCGTACATGTTTGATGTTCTTGTTAGGGTCTGATA 1350397 30 96.7 35 ..T........................... TACAGATCCAGTACACGCTGGGTATCATTTTTCCG 1350462 30 100.0 36 .............................. GAAGATGCCGACGACCTGAACATGCCGGAACTGGCA 1350528 30 100.0 37 .............................. GTATAAAGACCGGACCAGCTACCGTAAAATCGGAAGG 1350595 29 96.7 36 ......-....................... CCGTAACAAAACGCAACATGTCTTAACCAACAAACA 1350660 30 96.7 36 ..............C............... GCTTCGCCGGCCCTTTGGATTTGCTTTTTACCTCAA 1350726 30 100.0 37 .............................. CCGGTTTAACGACCGTGTTGCCAGCCTGCACAAAATG 1350793 30 96.7 36 ................G............. CCCATGTAGGCCGTGCCCGCAGTCTGTGCTATCTTC 1350859 30 93.3 0 .................C...........C | ========== ====== ====== ====== ============================== ======================================= ================== 27 30 99.1 36 GTCATAATCGAACCATAGTGGAATTGAAAT # Left flank : GAATATAGGCCCTTTAAAAGTTGGTGGTAACATGTATGTAATTCTGGTTTACGATATTGGAGAGAAACGTGTAGGGAAAATGCTCAAGCTGTGTAGACAGTATTTGAATTGGATACAGAACAGTGTATTTGAAGGGGAAATCACCGATGTGAAGCTAAAAGAGTTAGGCTTCCGGGCAAAGGAAATAATGAAGATGGAAGAGGATAGCCTGATTATTTTCAAAAGTAGAAATGAAAAGTGGCTGGATAAGCAGATCTTAGGAAAGGAAAAGAGCGAGCCGGATATTTTTCTGTAGTTGTCGAATATTATGTTATTTGTAATTTGGGATCCGTCCTTTAATACAGGTACTTTGTAAGTTGTTGACTATCAGTGTGGTGCAAGGTTGTCGGTGCTAGGACAAAATCCAGGTATTTCGCATCGACAACTTTTTGTAGGAAATAGCTTCTTCTTATGAGTTATAAAGCTTTGAAAATGAGCTTTTTTTGTCGTCGATTTGGCGG # Right flank : CATCCGGGACACAAATATCGTCCTCCTGTTCATCAGGATCATATTGGAGTTAAACCCAAGCAAAAAAAATGAAAATCAAAAAAAGCAGAAGAGTAATTTTTAAAAGTCGGGGCATAAAAAAACCGTCGCTAATCTACTGTCTTTCAAATAGTTGCGACGGTTTCGTGTACCCCAGATGGGAGTTGAACCCACACTCGCATTGCTGCGAACGGGATTTTAAGTCCCGCGTGTCTACCAATTCCACCACCAGGGTATCAAGGTGTAAAACCTGGAGCGGAAGACCGGGCTCGAACCGGCCACCCCGACCTTGGCAAGGTCGTGCTCTACCAAATGAGCTACTTCCGCAGGTTGTCTAATATAAGAACTTTTTCAACGTTTTAGCCATGGCTTTTTTCGTTGGGACTGCAAAGATAGTAATCTTTTTGAAGCTGCAAAATTTTTTTAGCGTTGAGCTAAAAGAATTTATGTATTCCGGAAAATTTAACTGCAATTAAGGCTTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAATCGAACCATAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //