Array 1 289919-290751 **** Predicted by CRISPRDetect 2.4 *** >NC_016751.1 Marinitoga piezophila KA3, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 289919 30 100.0 37 .............................. CTTAATAATTCAACAATTACGTCGTCTTTCTTCTATG 289986 30 100.0 37 .............................. CGATGCTATAATTGAAGTTGTTTGTTCGTTTTCTCCG 290053 30 100.0 35 .............................. CAGTCTCATGATAGCGTTACTTATGGTGGAATTAA 290118 30 100.0 36 .............................. GATGGATAGGAAAAGATAAAATATATAACTTCTTAC 290184 30 100.0 37 .............................. TCTGTTAATCTAAATTGATATGCTTTTTTAAATTCTT 290251 30 100.0 38 .............................. AATTTTTTAAGAACTTTTTTATTGGTATCTAATGCATG 290319 30 100.0 38 .............................. AATATTTCAACAGCTTCAAACATGAGCTTTTTAAATAA 290387 30 100.0 37 .............................. CGGTTATACAGTTGTTAGTGAGGGAGTGGAATTGATG 290454 30 100.0 37 .............................. ATACCAATTAAGGAGGTTGTTTAATCATGTTATTTGA 290521 30 100.0 40 .............................. CCTCACTTCAAAATAATTTTATGATTTTCAATTTTTCCCA 290591 30 100.0 35 .............................. AAAATCCAGCTGTTTTGGATGAAATAGAGGAAACA 290656 30 100.0 36 .............................. CAAGATGATGATTTAATGAATCAAGTTCCAACAATA 290722 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 13 30 100.0 37 CTTTCTACAGTACCTATAAGGAATTGAAAT # Left flank : TAAAAATAGAATTATATAAACTTGAAAAACACTTAATTGGAGAAGAAGAATACAAACCTTTTGTAATGGAGTGGTAAATATGTTTGTAATATTATATTATGATGCAAATGAAAAAAGAGTATCAAAATTTTTGAAAGTATGTCGAAAATATTTAACTTGGGTGCAAAATTCAGTTTTTGAGGGTGAAATTACAAAAGCAAATCTGGAAAAACTAAAATATGAATTAAAAACAAAGGTTAAAGATAACGATTCTATAATAATATATGAATTTAGAAGTATGAATTATAGTAAAAGAGAAGTAATAGGAATTGATAAAAAAGAAAATAATAAATTTATATAAGATTCTGTCGATATGGAATAATCAGTAAAATACAGGAATTAGACCGAAATTTTAATTTCGTTTTTGTAAAAAAAAATGACAAATAGAAAATTAAATAAAAAAATATGATATAATTCATCTATAATAATTATATTAATTAAGAAACTATAAAAAAATTACT # Right flank : TAGAAATTGAAAATTTAAACTTAGAAGCAAATTTAACTTTCTACAGTACCTATGCACTTACCCCAAATTAGTGGACAGCCTGAGTTTAACCTAAAAAAATAGCATTTTAAGCGGTAGTATAATAAAAAGTGTGTAAATAAAAAAATAGAAAAATAAAAAGAATGAATATGTGAAAAAAAGAAGCCCAGTAGTGTGGTGAAAGAGAAAGGGGATTTTGAAAAAAAGGTTACATGGGGGGATAGTAATGCCGAGAAAAAGAAAAGAGGAAAATGAACAGATTCTTGGCAATGTGGATAGGAATTTCATAAAACAATATATAAAAGAAAATGGAATTAAGGATTGGAATGATGTTGAGGATATAAGCAAAAAGCTTGTAAAAATAATGCTTGAAGAAATGTTGAAAGCAGAAATGGATTATGAACTTGGATATGAAAAGTATTCCAGAAAACCTGAGGATAACGATAATTATCGAAATGGTTATTCTAAAAAAACTGTAATAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTACAGTACCTATAAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [90.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 293851-294417 **** Predicted by CRISPRDetect 2.4 *** >NC_016751.1 Marinitoga piezophila KA3, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 293851 30 100.0 36 .............................. AAGACTAACCAATAATAAGCTGGTAAATGTAAAGCT 293917 30 100.0 38 .............................. CTGTCTGTAATTTTACCAAAACTTTCTGATGTATTATC 293985 30 100.0 36 .............................. TAAATTCTTGTTATATTAAATAATCCCTGTTTATAT 294051 30 100.0 40 .............................. ACAACAATAAATCCTTTTAAGCCTGAAGGCACTCTTTTAA 294121 30 100.0 36 .............................. TAAAAATAAAAATTAAATTCTTTTGCATTTAACATA 294187 30 100.0 36 .............................. TTAAAAAAATTATCTCGTGAAAACGGAATGTATACA 294253 30 96.7 36 .............................C TTCACTGTCTGTCTCGTTACTCCAACTTTTTCCGCG 294319 30 80.0 39 G...T..TC...A................A CTAAAAATATTTTGCAACCAGGAAGTTAAATCAACAACT 294388 30 80.0 0 G...T..TC...A................A | ========== ====== ====== ====== ============================== ======================================== ================== 9 30 95.2 37 CTTTCTACAGTACCTATAAGGAATTGAAAT # Left flank : TTTTTCGCTTTGTAATATGTGCTCCTTGGAAATTTTAGTACTTTACATATTGTTTTTACTGGGTAATATTTTTTGTATTTTTCTATGAACCTTACTATTTGTCTTGTTGTTTTCGTGCGAATATGGCTGTAGCTTTTTTTAATATTTCATTCTCCATTCTTAATTGCTGCAGTTCCCTTTGCATTTTCTCATATTCTTTTTTGCTGATACCACCTTCTATTACCGGTTTGGATTCTTTTATCCACTTATATATCGTTACATTGCTTATGCCATATTCGCGACTTAAATCATATACCTTTTTTCCCATTTCATGCAATTTCACTATTTGTTCTTTAAATTCGGCACTATATCTTTTACCGTTCTTACTCATGTGGTCACCTTCTTTCTGGTTTTATTATACTATTCCTTTGTTAACTTTTCGGTGCCCACTTTTGTTGGTCAAATCCACTATAAGGAATTGAAATAAATCTTTGTTAAGCTGTTCGGCAATATCTAAATTT # Right flank : AAATAATTTTAAACATAAAATTAGGATGGTGATAAAAATCAAAAAAATAAAATTATATGATTATGAAGAATATAAGGAAAATGCTTTTAGAAAAAATCCAAGGTTAAAAGAAGCTTATGATAGTCTTGAAGAGAAGTATAAAGCAATAAGTCAAGAGATAATTAATAATATGAATTTGGTTAAAAAGGATAAAGATATTTAAATGCGCAACAACTTGTTTCGCAATTTTCAATTTTGTTAATTACCAAATTAGGGCAACAAGCTGTTGCCCTGTTTATTAAAATCTTCCTCTTCCACCATGACCTCTACCTCTTGGTGCTGGTTTTGCATATGCTCCAGGTTGTGCTGGATATTGTGTCTGTGATGCATATCCTGTTCCTCTTGCTGAACCTCTAAAACCGTTTAATAATACTTCTTCTCCGTCTATTTTTGTTTCTGCTGGTCTAAAGATTTTTTCTCCATTTATTTCCACCGACCATCCTGTTACTTCCATTGTTTGT # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTACAGTACCTATAAGGAATTGAAAT # Alternate repeat : GTTTTTATCGTAACTATAAGGAATTGAAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 3 396000-397721 **** Predicted by CRISPRDetect 2.4 *** >NC_016751.1 Marinitoga piezophila KA3, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 396000 36 100.0 42 .................................... AATCCCATTCAACGTTTAATACTTTTTTAAATAACCAATTAT 396078 36 100.0 40 .................................... AATCTTTTCTATATACTTTGCACCAACCTTTATATTGCCA 396154 36 100.0 41 .................................... AGCGTAACGCTGTTTTCTGTAACCCGTCTTGCTTTTTACAA 396231 36 100.0 40 .................................... TCGTTGCCCTTTCTGAGAATAACCAGAAAAAACCACTTTA 396307 36 100.0 39 .................................... ACATTCTTTATCTTGACTGTCTTTACCTTCATCATAACT 396382 36 100.0 41 .................................... TCTTTTCAACTTCTGCTAAATTGTGAGCTAAGTTTCGTTCT 396459 36 100.0 41 .................................... TCTTCTTCCAATTCTTTTAATTCTTTTTTGTATTGCTTTAA 396536 36 100.0 41 .................................... AATAAATTCTACACCATATGGTTTTTTCATTTTACCTAATA 396613 36 100.0 41 .................................... AGTATTTATTACCTGTCTTTTATGCGTTTTATTGTACTTTA 396690 36 100.0 41 .................................... TTTGATTTTTAATTGTAATATGTAGAACAATCTTTATTCTG 396767 36 100.0 41 .................................... ATATCTAACAACATAACCTTTAATTAAACCACTATTCTTTT 396844 36 100.0 42 .................................... TTCCAGCTTTTCAATGTGTGGGAATATTATATACTCCCACTC 396922 36 100.0 40 .................................... AGTATATAATACTCCCAATCGTAACCGACAAAAATTTTAC 396998 36 100.0 40 .................................... AAATATTGAAATAACTATAATAAGACTCTTGTAAACACCA 397074 36 100.0 40 .................................... AATATTATTCTACCTAACCTTTCACCTTCTATTCTATCTC 397150 36 100.0 41 .................................... ATGAGGTGGAACATGCCACCTCAAAAAATTATATCATATAA 397227 36 100.0 40 .................................... AATGCTTGATATGCATCTTCCCAACTATTATATTTAATCT 397303 36 100.0 40 .................................... TGTTGAATCACTAACTCAGCGCCAGTTATGCCGTCGAAGT 397379 36 100.0 41 .................................... GAATTACTTCTCCTCTGGCCTTTTTGCGAACCCCATGATGT 397456 36 100.0 40 .................................... GTTTATCTATTTCTTCAACCATTAAATTGATTATTGCATC 397532 36 100.0 41 .................................... CGTTTTTAAACAACAAACCTCTACCAGTGCGATTAAAAACT 397609 36 100.0 41 .................................... TTTGATAGTGTAGTATAATCAATATCACGTTGAAGATGTTT 397686 36 94.4 0 ..T................................G | ========== ====== ====== ====== ==================================== ========================================== ================== 23 36 99.8 41 ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC # Left flank : TAAAAATATACATATAAACTAAAATTTCCAGCCATCTACTCTTTACGATGGCTGGTTTTTTATATATAAAATAACTGATTTTTTGATATAAGTTGCAATTACATTTAATAAAAGATTTATAAAAAAACTAAATATAAAAGAAAAACAAAAGAAAGATATTCGCAAAATAGTCAAAATTATAAAATACGCATAAATAAACCAAAACATATCTACGAGGTTCGCAGAGGTTTATGATTTTGTAACACTTTTCAAAAACCACTTGACAAAAGGATTTTAGAATGTTATAATAAAAATAGTTCGTATACGGACCTAAATTCAAAAACACAAAATCTCTGAAAGCAGCTTAAACAAAAGAAAACTGAAAAACAGGTACGAATATAGATGAAAAGCGGATTACAGAGATTTTATTCGAAAAAATGCCGAAAATTTCAAAATTAAAAAACAGGTTCGAAAAATCACCTTCTAAAAAACGCTAATAATAACCATTCTAGAAACCAGCT # Right flank : GCTCCTGCATTAAAAGCAGGAGCTTTTTTATCTTTTAATCACCAAAAACTATTTTAAATTTCTCCTATAAATATTGACATAATAATTTCATTATGTTAAAATTATAATATATACTTCAAATTTATTTAGTTGGTGATAATATGAATTTTAAAGAATTAGCTTTTAAGGCTGAAGAAGATTTTGACTTTGAAAAAGCTATTGAATATTATAAAAAAGCATTTAATGAATTAACAATTAATGATGATTCATTAATTCGCTATGCAAATTTATTATTTGATTTTCAAAAATTTGAAGAAGCAGAACCAATTTTTGAAAAAATAGTTTCTGAAATTAATGATTCGGAGTATATGAGTAAACTTGCTATTATTTATGAAGAAAATAATAAATTTGAAAAAGCATTGAAAATATACAAAGAATTAGGAATAGAATCTAAAGTGAAAGAGCTCTCAGATAAAATCGAATTAAAAGCACCATCTCAAAATGCAATAAAACGTTTTATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 414191-414612 **** Predicted by CRISPRDetect 2.4 *** >NC_016751.1 Marinitoga piezophila KA3, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 414191 36 100.0 42 .................................... TTTTTCGTCAAAACTCCCATCATATAAACTATTAATTGATTC 414269 36 100.0 41 .................................... TGGTAATCTTCTGGGATGACAACGTCATCCCATATAAAAAT 414346 36 100.0 41 .................................... ACCTCACTGATTTGAAACTTTTTATCAAAACTTCCATCGTA 414423 36 100.0 41 .................................... GGACGTGTAATCCCCTCGTTAAAATACTTTTCTACTTCTTT 414500 36 100.0 41 .................................... TCCGATAAATCTTTTCTAATTGTATTCTGTAATTTTTTATT 414577 36 86.1 0 .............C.......A.......C.A...A | ========== ====== ====== ====== ==================================== ========================================== ================== 6 36 97.7 41 ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC # Left flank : GAGAATGGGGGATGAAAATAATAATGGAAGCATATGAGATTATTACAATGCACAAGGAAATATAAGCAATAATAAAGAATGGATAAAAAAAACAGCAATACTCGGAAATAAGAAATTTATAAATAAACTAAATATAAAAGAAAAACAAAAGAAAGATATTCGCAAAAATAACAAAACTATAAAATACGCATAAATAAACTAAAACATATCTATGAGGTTCGCAGAGGTTTATAATTTTGTAACACTTTTCAAAAATCACTTGACAAAAGGATTTTAGAATGTTATAATAGAAATAGTTCGTATACGGACCTAAATCCAAAAACACAAAATCTCTGAAAGCGGCTTAAACAAAGGAAAACTGAAAAACAGGTACGAATATAGATAAAAAGCAGATTATAGAGATTTTATTCGAAAAAATGCTGAAAATTTCAAAATTAAAAAACAGGTTCGAAAAATCACCTTCTAAAAAACGCTAATAATAACCATTCTAGAAACCAGCT # Right flank : ACTCCTGCATTGAAAAATGCAGGAGTTTTTGTATATGGTATAATAACACCATGGGGGTGAAAAAATGAAGGAATTAAAAAGTCTTCCTCTGGGAGAAAGCAACTTTAAAACCATAATGGAAAACAATATGTATTTCATAGATAAAAGTATGCTCATAAAGGATATATTATCAGCTGGAAGAGTAATATTAATCACTCGACCAAGGAGATTTGGAAAAACATTAAATATGAGCATGTTAGAACATTTCTTTTCAATGAAAAAAAACAGTGAGAGTTTATTTAAAGATTTAAAAATCTGGAATGAAAAGAAAATAATAGAAAAGTATTTAAACAAGTATCCTGTTATATTTATTAGTTTTAAAGGCTTAAAAAAGAAAAAATATGAAGATATGAAAAACGGAATAAGAGAGTTAATATCAAAATTATACACAAAGTATGTATATCTACTTAATACTGATAAAATAACACAATGGGATAAAAAAAGAATTATAGGTATATTAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 5 425317-426809 **** Predicted by CRISPRDetect 2.4 *** >NC_016751.1 Marinitoga piezophila KA3, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 425317 36 100.0 40 .................................... ATAAATAAACTATCTCGTAATTTTTATTGTCTGAAAGTAT 425393 36 100.0 37 .................................... TTTAGCTGAATAATAATAATTCTTTTCAATGTTGCAA 425466 36 100.0 42 .................................... ACAAATAGAAAATTTTTCATCGAATGAACCATCGTAGAGGCT 425544 36 100.0 40 .................................... AAATACCTCTAAAACCTTTTTTATTTACTTTTTTTATTAA 425620 36 100.0 42 .................................... GAGGTCATCGAAATACTCGGACTCTATGTCTCCAATAGAGGA 425698 36 100.0 41 .................................... TCTTCTTCTTTTTCTACCCACCCGAATATTCTAAGGTGGGC 425775 36 100.0 41 .................................... TTCACCTCCTCTGGAGTTGGCTTTCTATATTCAATGATTCC 425852 36 100.0 42 .................................... TTCGATCCACCATCTAAGCTGTCATCTCCTTTCTCTAAGGAA 425930 36 100.0 40 .................................... GCAACTTTTTTAATCATTGTTCTGGGTTTTGTTTTCCATA 426006 36 100.0 40 .................................... AATTTTTCAATCAATTTTTTTACTCTTTCTCTTTCTAACA 426082 36 100.0 41 .................................... GGGTATCATACATCCCCAATCTGAGAAGAATTGGGGATATA 426159 36 100.0 40 .................................... ATTGTTACAACATCAGCAATAGTGAAATGATACTCTTCTT 426235 36 100.0 40 .................................... ACTTTTTTCATTATATTTAAAAATTTTCTAATTTTTTTCA 426311 36 100.0 40 .................................... TAATAATGGTTGGAAAATCGAGGAATGACAATTCATCATA 426387 36 97.2 41 ..............G..................... TGCGGTTTAAACTCTCTCCAATTTCCAATAGGAACTACCTC 426464 36 97.2 41 ..............G..................... AAAATAATCAAATGCTCCTTCTGCAATCAAAAAATATTCTT 426541 36 97.2 41 ..........C......................... CAAGTTCGTCTGCTTCTGGTGATAAATCGATTCTGTCTATA 426618 36 97.2 40 ..........C......................... TTCATTTCCTCGATTTTTTCTTCCTTCATTGATTCAGGTA 426694 36 94.4 43 T.............G..................... GAAACTATGATTGTTTGAAAACATAGTGTTTAAACTTTTCATC 426773 36 75.0 0 ...TA.T..C...C.......A.......C.A...A | T [426779] ========== ====== ====== ====== ==================================== =========================================== ================== 20 36 97.9 41 ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC # Left flank : GAGAATGGGGGATGAAAACAATAATGGAAGCATATGAGATTATTACAATGTACAAGGGAATATAAGCAATAATAAAGAATGGATAAAAAAAACAGCAATATTCGGAAATAAGAAATTTATAAATAAACTAAATATAAAAGAAAAACAAAAGAAAGATATCCGCAAAAATAACAAAACCATAAAATACGCATAAATAAACTAAAACATATCTATGAGGTTCGCAGAGGTTTATGATTTTGTAATACTTTTCAAAAATCACTTGACAAAAGGATTTTAGAATGTTATAATAAAAATAGTTCGTATACGGACCTAAATCCAAAAACACAAAATCTCTGAAAGCGGCTTAAACAAAGAAAAACTGAAAAACAGGTACGAATATAGATAAAAAGCCGATTATAGAGATTTTATTCGAAAAAATGCTGAAAATTTCAAAATTAAAAAACAGGTTCGAAAAATCACCTTCTAAAAAACGCTAATAATAACCATTCTAGAAACCAGCT # Right flank : ACTCCTGCATTTTTCAATGCAGGAGTTTTTGTATATGGTATAATAACACCGTGAGGTGAAAGTATGGAAGAATTAAAAAATCTTCCTCTGGGAGAAAGCAACTTTAAAACCATAATAGAAAACAATATGTTTTTCATAAATAAAAGTATGCTTATAAAAGATATTTCGGAAGGTGGAGATGTAATATTAATTACAAGACCAAGAAGATTTGAAAAAACATTAAATATAAGCATGTTAGAACATTTTTTCAATGAAAGAAAACAGTGTGAATTTATTTAAAGATTTAAAAATCTGGAATGAAAAGGAAATATTAGAAAAGTATTTAAATAAATATCCTGTTATATTTATTAGTTTTCAGGGATCAGGTCGAAAATTGCAATTACCCCCCTAAAAATTCGTAAAACTAATTATTTATATTATATTAAATTATCAGTGTCGAGAATAAATTTTATTATGATATAATTCAATTGATAATCTAGAGCGTCTGAAATAAAGGTGGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //