Array 1 202524-202373 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKNV01000018.1 Streptomyces albidoflavus strain CR19 Scaffold10_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 202523 29 100.0 32 ............................. AAGGCGCTCGGCGAGGTGGGCCAGCCGAAGTC 202462 29 100.0 32 ............................. CAGCACGACGGCGTCTGGGGTGGCTACTCCGA 202401 29 79.3 0 ..............G......CAA.C.T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Left flank : GCAAGCCCACACCGCGCCGCCCGCTACGCCACCGGCAAAGTCCGGTACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCGGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGAAGGTACGTCGTGTCCTTCCAGAGCCGGCCGTGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGATGCGCGGGGGGCCGAGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGGGCTCACGGCGAGGTGGGCATTTTGGGGCGAATGTCGCTATCGGTGGAGCTTGCGGAAACTGGGGCAGGGGCGCCGTAAACCTGCTGGTCAGGGAGA # Right flank : ACCCCGCCTCACCCCGACCCGGCGCCAAGCGCCGCCACCCGCCTTGCTCCCCCCACCTCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCTACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGTGGGAGTGCGCGCGGGCTGGCCAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCCTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGC # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 166720-166930 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKNV01000021.1 Streptomyces albidoflavus strain CR19 Scaffold6_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 166720 29 100.0 32 ............................. TGAACAGTGGACGAGGAACCGCCACCTGTCCT 166781 29 100.0 32 ............................. CCGGCGGTCGGCTACCGGCTGACGCTGGACAA 166842 28 93.1 32 .................-.......C... CCGGAGTTCCGTACGGAGGGCGAACTCGTCGA 166902 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : GTACCTCGGCGGCGCCTCCATCGACTTCGTCGACACCATCGAGAAGCAGGGGTTCACCATCGACAACCCCAACGCCACGGGCTCCTGCGCCTGCGGTGACTCCTTCAGCTGAGTCGCTTCGCCGAGAGGCGGTGCCCCACTTCGGTGGGGCACCGCTTTTTTGCTGGCCGGGCCTCACTTGCCGGCCGGGCTCGGTGGCCTCAAGCGCCGGCTGGGCTGGTTTGGCCTCAAGCGCCGGCCGGGCTGATGGGGGTCGTGTTCGGGGTGCGGGCCGTCGGCCTGTGCGGTCACAGATGGCCTCAATCGCCGGCCGGGCTTGAGTTTGGCTGGGCTTGGACGGTGGCCTCAACTGTCGCTGCTGCTGGGGGTTCTGGGAGAGGGTGGGCGGGGCTTCGGGCGCGACAGGGGAGGGTGTTTGCTGACTTTCGACCTAATTGCGGCAATCTCGCAAGCTTGCAGAAATAGGCTGAGCTGCTAGGCAAAGCCGCAGCTCATCGAGG # Right flank : CGCCAGCGCCCTCCAACCTGGCCTCGCCGAGGTGTGCTCCCGCGTACGCAGGGGCCCCCGGAACCCAGGTCTCCCACCCGCTCAGTGCCACCGCTGCGCGCACCAGACGCCCCCAGCCCAGCGCCTCCTCCCCTCAAAAGGCCAAGATCGTGACCGTGGCAGCGTAGATCACCACCAGCAGCGCCCCGTCGAAGCCCAGGCGGAACCAGCCGCGTTCCTGGCGGATGAGGAGGCCGCCGAGGACGACGGTGGTCATGACCAGGGCGGCGCTGGTGAGGAAGAGTTCGTCGTTGCCGGCGGCGTGGTAGAGGGAGCCGCCGCGGTAGGCGAAGTCGCCGACGGCCAGGTTGAGGACGTCGAGGGAGTTGCCGCCGATGATGGCGGCGAAGGCGAGGGTGATGGCGCCGCGGCGGACGGCGGCGATCGAGGTGACCGCTTCCGGGAGGCCGTTGATGACGCCCAGGATCACCGCGCCGACGAAGCCCGCGCGCAGGGTGGTC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 208736-208886 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKNV01000010.1 Streptomyces albidoflavus strain CR19 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 208736 24 100.0 39 ........................ TCTTTGACCGGCAGGTCACATCGGACCGGCGCACAACCC 208799 24 100.0 40 ........................ TCCTTGACCGCGAGGTCGGCACAGACCAGCACCCCTCGAT 208863 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================== ================== 3 24 100.0 40 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCTTCTTCCTCGGGCAGGCCCTGCTCGGGAACCTCTCCGCCTCCATCGGCGACCCCGGCGTGCTGCGGGCCGTCATCGGGGCCGCCCTCTACATGACCCTCATGGCCGTCTTCTCCATGGGCGTCGCCGCGATGCTCCGCTCCCCCATGCTCTCCCTCGGCATCCTCGTCCCCTTCTTCTTCCTCGTCTCCTCCATCCTCGGCGCCGTCTCCGCCACCGAGAAGATCGGCCGCTTCCTCCCCGACCAGGCCGGCTCGAAGATCATGCAGGTGGTGGCGCCGCTGAACGACGACACCCCCTACGGCCCCTGGGGCGGCCTCGGCATCATGGCCCTCTGGGTGATCGCCGCCCTGGCCATCGGGTACGCCCTACTCCGCCACCGCGACGCCTAGCCAGACGGAACCAGGCCATCGACCGGGCGGCCTCAAACGCCGGCCAGGCTTGAGTGGCCTCAAGCGCCGGCCAGGCTCAGTGGCCTCAAGCGCCGGCCGGGCTACCGA # Right flank : AAACCCCCAGCCCACCCCGGGAGGGAACTTCCGCTTGGCCGGAACCGAACGCCGGTGACTATCCTCCTTACGTTGACGGGGACAACCCCGGCAAGGAACTCTGTCGACGGGTGCGGGGAGCACATGATCGAGGCCACCGGCCTGACGAAGCGCTACGGCGCGAAGACCGCCGTGCACGACCTCTCCTTCCAGGTGAGGCCCGGCACGGTGACGGGCTTCCTGGGCCCGAACGGCTCGGGCAAGTCCACGACGATGCGCATGATCGTCGGCCTGGACGAGCCCACCAGCGGCCATGTCACGATCGGCGGCCTCCCCTACCGCCGCGTCCCGAACGCCCCGCGCCAGGTCGGCGCCCTGCTCGACGCCAAGGCGGTGCACGGCGGCCGCTCGGCCCGCAACCACCTGCTCTGCCTCGCGCAGCTCTCCGGCATCCCGGCCCGCCGCGTGGACGAGGTGCTGGGCGTGGTGGGGCTCCAGGACGTGGCGCGCCACCGCTCGAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //