Array 1 70373-74822 **** Predicted by CRISPRDetect 2.4 *** >NZ_QIUQ01000009.1 Klebsiella pneumoniae strain WUSM_KP_110 NODE_9_length_168166_cov_34.7206, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 70373 29 100.0 32 ............................. CGATGCCGGATCCCGAGTTTATCCCCGCCGGT 70434 29 100.0 32 ............................. ATATTAAAGGTTTTAATGCGATCTACCTTTAC 70495 29 100.0 32 ............................. ACGGATCAGTAGTTACTGACGGATCGCCCCCA 70556 29 100.0 32 ............................. CTGTGCGAGTTCGGCATGACACCGGCCAGCCG 70617 29 100.0 32 ............................. GAGGGGGCCGAGGGAGCAGTGATCAGCAACGT 70678 29 100.0 32 ............................. CCAAACACAGATTTTCGTAACGTTATCCGGGT 70739 29 100.0 32 ............................. TTTTTTTTCGATCCCCTCCCCACCACTAAACG 70800 29 100.0 32 ............................. CGCCGTTATCCAGAGCAAATGACTGAGTAACC 70861 29 100.0 32 ............................. GCCAGAGCGGTGAAGCGCCAGCGCCGCGCCCG 70922 29 100.0 32 ............................. TCGCTCACCCTGAGCCGCCAGACCGGCACGTG 70983 29 100.0 32 ............................. GGCCCCAAAGGCGAAGAGGCACCGGCCTACGG 71044 29 100.0 32 ............................. CAATGGTGATGGACTATGACCGATAGCAGCGT 71105 29 100.0 32 ............................. CAATATATGGTGTGCTGACGGGCTGTAAAAAT 71166 29 100.0 32 ............................. GATAATGACTGACAATATCTTACCCGCTACCG 71227 29 100.0 32 ............................. GTATTGATAACCTTTAGGATTTATAGAAATGG 71288 29 100.0 32 ............................. TGCTTCCAGCATTTCCGGTGCTGAGGCGATTA 71349 29 100.0 33 ............................. TGGTGCCGCTGAAATTAGCGCCGCTTACCAGGC 71411 29 100.0 32 ............................. CCCTGCGGTGCGCCAGTTCCCTTATTGGTGGC 71472 29 100.0 32 ............................. GCGCAACTTAAACTGTGGGTCTTCTCTGGACA 71533 29 100.0 32 ............................. ATCAACTGATTCGCTCAGCCTGGGAAGATGCA 71594 29 100.0 32 ............................. AATCTGGCACTCGCTTCCGGTGATATTCTCTA 71655 29 100.0 32 ............................. CAGAAAGTCACTTAGCATCGCCTTTCTCCTGT 71716 29 100.0 32 ............................. TCCTATCAGACCAGGATTAACCCGCCTTTCCT 71777 29 100.0 32 ............................. GAATTTCAGTCCAGAAATATTTATCCAGAGGA 71838 29 100.0 32 ............................. CTGGTGGAGCGCGCAGAACTGTATTCGACAAC 71899 29 100.0 32 ............................. GTGGCCTTTCATGACCGTTTCCGAGCATGGAC 71960 29 100.0 32 ............................. CACAGTCTGTTTTCCAGAATGTGCATGGTGCA 72021 29 100.0 32 ............................. TCATCCAGCAGGACAAAGCCAGAAAACTCTTC 72082 29 100.0 32 ............................. CAACTCCGCAGCGCCTGGGAGGGGTTTCGGAT 72143 29 100.0 32 ............................. CTGGTCCCTTTCTTGAATCCGCCGGATGCTGG 72204 29 100.0 0 ............................. - Deletion [72233] 72233 28 86.2 32 ...G.-G.G.................... TACACAAAAACGTTTTACAGTTGCGCAGCGCT C,A [72236,72244] 72295 29 100.0 32 ............................. TGCGCGGCAGAATCGTCGCCGTCCCGCCCGGT 72356 29 100.0 32 ............................. CAGGTCATGATGAAGACCTATCCGCTGGCCGA 72417 29 100.0 32 ............................. GGATTCACCTCGACCTGCTACGACGGACAGTA 72478 29 100.0 32 ............................. GCGACGGCGTGGATAGTCGGGATTTCACGCTA 72539 29 100.0 32 ............................. CCGGTTGACCGCACGGCGCCAGCGCGCCCCTT 72600 29 100.0 32 ............................. GCCGGCAATTTCTCGTTGAGGGCGCAGTTCAG 72661 29 100.0 32 ............................. TTGAACGATTCGGTTACCATCGCCTCCTGCGA 72722 29 100.0 32 ............................. ACACCCGAGATTTACCTGTCAGCCAGCGGCGG 72783 29 100.0 32 ............................. TAATGAATAGCAATTATCCATTTTTAGTAGGG 72844 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGTGGT 72905 29 100.0 32 ............................. CTGTCGGCCCGCCAGCGCTCAATAGGCGCTAC 72966 29 100.0 32 ............................. TGTTAGCTGAGTGTCGCCGGCACCGATATATT 73027 29 100.0 32 ............................. GGAAACCAGTTGCCGATATGCCCCGTAAACGC 73088 29 100.0 32 ............................. AACTCATGACGGGCAAGCGGGTCGCCACCGTT 73149 29 100.0 32 ............................. CGCTCTCTGGTATGTACTGCAACGTGCGATTC 73210 29 100.0 32 ............................. GTAAATAACGATTATGCACTAGAGGAGTTGTC 73271 29 100.0 32 ............................. TCATGCAGCAGATACAGAAAAAGGCTGGGCCG 73332 29 96.6 32 ............................A TATGCAGGCCGCAATTGCCTGTAGCTGCTGCC 73393 29 100.0 32 ............................. GGTGGAACCAATGTCGCCAAAGCAATCGGAGT 73454 29 100.0 32 ............................. AACTGTCCGACGTGGTCGCCGGTCGTGATATG 73515 29 100.0 32 ............................. GGGATAATCTCAGAGTGTAAGTCATTGTCACA 73576 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 73637 29 100.0 32 ............................. TTATTATATCTTCACGGTGAGGGAATGGTCCC 73698 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 73759 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 73820 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 73881 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 73942 29 100.0 32 ............................. TGCTAACCGGCACGTTTACCCGGACGAACACC 74003 29 100.0 32 ............................. CTGATCCCCTCCAACAACACGCCAGGCACAGC 74064 29 100.0 32 ............................. CGGTTAGCAATCCCGGGCACGCTATGGATACC 74125 29 100.0 32 ............................. CGGGGATCAAAAGTTGCCACACCGTCAAAATG 74186 29 100.0 32 ............................. GGGCTGAATGGCGAAAATATTGGCGATCTGTT 74247 29 100.0 32 ............................. TCGACGGTAACCCGTGGAGCAAACTGGAGCCG 74308 29 100.0 32 ............................. GAGGCACTGGGTGAATTATATGTTGAGATTGA 74369 29 100.0 32 ............................. CAGGAAAAGGCGATACAAAAGGCAGTGAGCGA 74430 29 100.0 30 ............................. TGCGGCATCGCTCTTCATGACTGGCGATAT 74489 29 96.6 32 .....T....................... AGCTACTGGCCGCCAGCCACTGGATGACGTTG G [74493] 74551 29 100.0 32 ............................. CCGTGAGCCGTGCTCCTCGGTCGCCATCCCCA 74612 29 100.0 34 ............................. CGAACCAATAAGCGCCCCTTGCCGAGTGACTCCC 74675 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 74736 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 74794 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================== ================== 74 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGACCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //