Array 1 36468-46134 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOSL01000053.1 Lujinxingia vulgaris strain TMQ2 scaffold54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 36468 36 100.0 38 .................................... TCGTCCGCTCGAAGCAGGCCGGGGTGCCCTGTGCCGAC 36542 36 100.0 36 .................................... TCACTCCAAGAAAGTGTTGTCCTCGAGCTGTTTAAA 36614 36 100.0 38 .................................... GCACGCTGGTGACCGCTCCCGTGACGCCGAACGACGTG 36688 36 100.0 38 .................................... TAGAGAATGAGATTGAGCCACCCGATGGCCCATTCTCG 36762 36 100.0 37 .................................... GATTCTTGCTCGATCACCAACCTTCCCTTTGAAGATG 36835 36 100.0 38 .................................... ATATTAGCATCACCCCCAATTAGACCCATTTCTACCAG 36909 36 100.0 39 .................................... GTCGACGGGCATCACCACGATCTCCAGCGCGTCTTTGTC 36984 36 100.0 39 .................................... GCTTCCCGGCTCTCGCCGGCGGTGGTCAGGTTTTTTCAG 37059 36 100.0 41 .................................... AGAGGATTTAGATATTTTAGAGGAATTCGATTGCGCGCATC 37136 36 100.0 39 .................................... TCGGCCAACCAGGCCGCCGAGGCGCTGGGGCTTTTGGCT 37211 36 100.0 35 .................................... GACCCCGAGGCTTCCAAGATCACAGTGGTGATGGG 37282 36 100.0 36 .................................... ACCCGATCGCGCGCTTTCGAGGTAGAAGTTTTTGCG 37354 36 100.0 39 .................................... CACGCGCAGACCGAGCGCGCGGGCGTAGACGCGTTCGGC 37429 36 100.0 38 .................................... CTCAGCCATGTCGCCATAGACCTGCTTGCCGTGGCTGA 37503 36 100.0 38 .................................... GCGGGTGGCAAGCTGAGTTCATGGGATCGGGTATCATT 37577 36 100.0 39 .................................... ACCCCTTAACGCTTTACCCCCTACCCCTGGAACCACGAT 37652 36 100.0 37 .................................... ACAGCCATCCTCCGCACGGCGGGGGAGCGGGACCGGC 37725 36 100.0 39 .................................... AGCAGTGCAACCGCACCCAGCTCGACCCTTTCGCACGCC 37800 36 100.0 37 .................................... GTAAACGCCATCACCGACACGCGGGCCTCGGAGTGGA 37873 36 100.0 37 .................................... TTGTGTGATTTCCGACCACTCTTATACACCAAGTCCC 37946 36 100.0 37 .................................... TGTTCGCATCGGGAGCAGAAGAGGCGCAGTTTCTGGC 38019 36 100.0 38 .................................... TTACGCGGCAGCTTATCCTCCTGCTCCCATCTCGCCAC 38093 36 100.0 37 .................................... CTGAGCGCTCCGGTCTGGCCAGAACGACGGTCAACCG 38166 36 100.0 36 .................................... GATTGGGAGCGGGCTTTTATGGCCGACACCCGCCTG 38238 36 100.0 40 .................................... GGAGATCCTGCCCGAACTGAGCGCCCTCGCCGGTAGCCCT 38314 36 100.0 40 .................................... CCTGACAATTTCGCTAGCATCTCTGCGGAATCGTTTTCGA 38390 36 100.0 39 .................................... TGGCCGTACACGATCGCCTGCGCCCAGGGGTCGCGAATG 38465 36 100.0 36 .................................... ACGTCCGCGAAAGCCGCGCCCGGACTGTATCGAGTC 38537 36 100.0 35 .................................... ATCCCGATCGTCGCCGGGGTTGGTGGGGTATGGCT 38608 36 100.0 35 .................................... CTGGAGTTATCCCGATAACCCTATATGTTGATCAT 38679 36 100.0 38 .................................... CGATGGTGCCGATCTCCTTGTGGACGCATCCTGCGGTG 38753 36 100.0 43 .................................... AACGGGCTTTCGTGAGAGAAGAATTTGTGATTGATTTTCTCTA 38832 36 100.0 42 .................................... AGGTTGCTCTTGTTGGGGCGATGGTCGCCCGCAGCAACACCG 38910 36 100.0 36 .................................... GCGTGAGGACCAGGCTCTCTCCGATGTACGCTTCTG 38982 36 100.0 41 .................................... GAGGAGTTCGGAGATCCGCGTCACTTCATCCCGATCGTCGC 39059 36 100.0 38 .................................... CTCCACGCGTAGAGCACCGGCGAGCGCGACCCGAGCCA 39133 36 100.0 42 .................................... AAGCGCCACGTTCCATGAGGGCTCGCACGGTGCATGAACGAG 39211 36 100.0 38 .................................... AGCAGCTGGCGAACGTCCGCGAGGGCTGGGTGCCTGAG 39285 36 100.0 38 .................................... TTGTTGGCCTCCAGCATCTCGCGGATCGCCTTGAGGCT 39359 36 100.0 37 .................................... AGGGGCGCGCGACCATCCAGGCTTATGCCGATGTGGC 39432 36 100.0 38 .................................... TATCTGTCAGGTCACTCATCAAAGGCCATCATCGTAGT 39506 36 100.0 41 .................................... CTCGTGCACACCGGGGATATTGCCGAGACGCCCCGCGACCT 39583 36 100.0 36 .................................... GGGCACGACCACACCGCCGGCGCGTGGTCGGACGTG 39655 36 100.0 37 .................................... TCACTGAGCGCCTGAAAGCACCCGTCGACGCGCTCGG 39728 36 100.0 40 .................................... CTGGCAGGATGGCCCCGAGAAGAACGCCGAGGAGGCCCGC 39804 36 100.0 38 .................................... TGACCCTCGCCCTCACCATCGCAGGCGTCCTATGTCTG 39878 36 100.0 38 .................................... CCGGCCGACTCCGCGAGGCGGAGCCCGGCGTAAACACG 39952 36 100.0 37 .................................... TTTTTGCAACCTGGGCAGCTTCCTACAAATTTTTTAT 40025 36 100.0 37 .................................... CAAGACCCGAGCGACAAGGTTCTGCGCAGCCTGCCCG 40098 36 100.0 39 .................................... TGAGCGAGGCCGGGCGTCAGGGCGACATTGAGGCGGGCA 40173 36 100.0 37 .................................... AGCGACCAACTCAAGCTTGAGTGATGGCGTAAAATAC 40246 36 100.0 37 .................................... CCGAGCTCCGAGGCGACTTCGAGGAGTTCAAGGCCGA 40319 36 100.0 36 .................................... TGCTCGATGGTGTTGACCCACACAGTGTGTGGGTCT 40391 36 100.0 36 .................................... AGCACGGAAATCGCCACCATCAGCAGACTGGACGGC 40463 36 100.0 38 .................................... AAAGATGTGCTTATGCCGTTTCCGTTGTTAACTATATG 40537 36 100.0 37 .................................... CAGGGAATGGCCGCCGATGGGGCGAAGATTGCGCTGT 40610 36 100.0 40 .................................... TCCGCACTCTGGGCGATGCGCTCGCGAATCTTGTCGGCGC 40686 36 100.0 37 .................................... GCGATCACTCTTCTTCTAGGGGCTCAATTGAGAAGCC 40759 36 100.0 38 .................................... CCTCGCAGCAGTGGTCGGAGCTCGTCGCCGTCGTTTCC 40833 36 100.0 39 .................................... AAGCTCTGCAACTTCGGTGACCATCTTTTGCATTTCCTG 40908 36 100.0 38 .................................... CTGATTACGCCATACTCTTCACTGCTTGGTCTAGTGCT 40982 36 100.0 37 .................................... GAGTTCGATCTCGGTGAACAGCGTCCCTCCTCTTGTC 41055 36 100.0 38 .................................... CTGACAGACATGTCATAAGTGCCATCCGCTAACTGCAC 41129 36 100.0 37 .................................... GTCGACCACCGTGGGCAGGCGGTATCGCTTAATCGTC 41202 36 100.0 39 .................................... AACTCGAACCCCTCGTAGGTGGCCCCGAAACTCTCGCCA 41277 36 100.0 41 .................................... ATCGCCGCGACCTGCTCTTTGGTCAGGCTGGTCGTCTCGGC 41354 36 100.0 38 .................................... GAGAGCAGCAGCTTGCCTCCCTTCGCAAAGTTGGGGGC 41428 36 100.0 40 .................................... GACCTCTCCATCCTCATCTTCGCGTGCCCACACTTCTCCT 41504 36 100.0 37 .................................... TCGTATATCTCGGCGACACGATCGTAGGGCATGCCCA 41577 36 100.0 40 .................................... GCGTTGGCGTCAGACGCTTTGCCGCCTTTCTCAACCTCGT 41653 36 100.0 36 .................................... CGGGGCGTCCTTCTTCTTCGGCGCGGGCTCGGGCGC 41725 36 100.0 39 .................................... TGAGTTTGAGAAAGTCCGACCGGACCACTGAGGCCGCCG 41800 36 100.0 37 .................................... TTCTAAGATTTTCGTTCTGTGTACCCACATCTACACT 41873 36 100.0 36 .................................... AAGGGGCTTGGCCTGAGTCTGCATCTTCGCAGCCGT 41945 36 100.0 39 .................................... GGCCAGCGCAAGCAGGAGATCAACATCACCTACGATTTT 42020 36 100.0 38 .................................... ACCGGTCGCTATCTCCACCTGCCCGTCGATCTCCGCTT 42094 36 100.0 40 .................................... GCCATTATCGCCTCAGATATGCGGAGTGGCCGACCTTGAG 42170 36 100.0 39 .................................... CTGAGCTCGTGCCCGAGGGCGACGGTCACACCTACCTGT 42245 36 100.0 39 .................................... AGCGCGTCGTGCGCCCGTCTCTCCGAGCCGGGGTAGCGC 42320 36 100.0 40 .................................... GCCTTCACGGCCGGTGTCGAGTTGATCAGCGTCGTCACGC 42396 36 94.4 36 ...........T..T..................... TGTTGATCTGAAACCTCTCAATTGGGTCCAACGATA 42468 36 100.0 37 .................................... GTCGCGTGGTGCAACCGTTGGTTGGGCAACATCTGGC 42541 36 100.0 37 .................................... GGCGCAGGCGTTTCGCGTTACGCTCATCATAGCGGCC 42614 36 100.0 39 .................................... TCCCCCGAGGAACGCCTCGTGATGGTTTCGACCCACGAG 42689 36 100.0 38 .................................... GGGCATAACATGGACTCGTCGGCGACGGACATCGTCAA 42763 36 100.0 39 .................................... TCCCCCGAGGCTGTATTCACACCCGGCAGCTTAAGAGTT 42838 36 100.0 42 .................................... AGCGCCAACCAGGCAGCCGAGGCGCTGGGCCTTCTCGCACAG 42916 36 100.0 37 .................................... GCTGTTGGCAAACATGTCGCGCGGCCTCTCCACGCCG 42989 36 100.0 39 .................................... GGTTGGGTTGCTCTCTTACACTAAGTAATAGCAGGTGCT 43064 36 100.0 38 .................................... CCATTAGTTCACCTCCGCTTCTAAAATTTCTTCGACTG 43138 36 100.0 36 .................................... CGTTAGGAGGGGGGATCTCCATACCTACATAGTCTG 43210 36 100.0 37 .................................... GGCGTGCGTCTTGTAGAGCGCGACCGCCGACTGCACC 43283 36 100.0 37 .................................... CTGAGTCAGAGATGACGCCTTGGGAAATAGTCTCCAG 43356 36 100.0 39 .................................... GCCGTTGCAGTCGGGACAGGTGCCCAGCATCAGCTCCCC 43431 36 100.0 36 .................................... TTCATCGCCCGATACGTCGGGTCGATGTCGCTTGCC 43503 36 100.0 37 .................................... CCCCGTCAGCGCCGCCTTGAGCGACTGCTGGCTGCAC 43576 36 100.0 36 .................................... CTAAAGGGAGTTAGCGATCAAACTGACGACTATTTG 43648 36 100.0 36 .................................... CATCCTCACCGCGTCGAAAGAATGAAGCGTGTTCTT 43720 36 100.0 39 .................................... ACTTACACGACCTTAGAGGAACTCGCCGCTAACGCCGTT 43795 36 100.0 42 .................................... ACGTCGCCTCCTCTTCGTCTCAGTTGCCGCGAAATAGATCGC 43873 36 100.0 40 .................................... GGGGAGCGGAAGTACGGAACCCGGCTCCACTCATTCAATC 43949 36 100.0 36 .................................... TGCACCGTCATCGCGGGGAGCTGGATCGTGCGCTTG 44021 36 100.0 36 .................................... GCCCCCATGATCCTAACAGACCATGGGGGCTTTCTT 44093 36 100.0 40 .................................... TCAATGGCAGCCTTGATCTTGCGATACTCTTGCGGATCGA 44169 36 100.0 38 .................................... GCGCTGTTTATGGCATGGAATTCAGAATGCCGTGTGAG 44243 36 100.0 37 .................................... ACGTGGTGTTTTCCGCGCTTGCCGACGGGCTGGAGAA 44316 36 100.0 37 .................................... ACCACCGTATCTATCAGAACGGTGCAGTGACGGGAAC 44389 36 100.0 39 .................................... GTGTCTAAAGTTACGGGCAGACCTTCGGGGGGCTCCACC 44464 36 100.0 38 .................................... GACTACTTGACCCTCCGCGGGTCCGACCCCGTGGAGTA 44538 36 100.0 39 .................................... AAGAGTCGATCTTCGTCGCGTTCGACGTCGCCCGGTGGG 44613 36 100.0 38 .................................... CACTGGTCGCGAGACCCTCGCAAGAGCAAGGCATGGCG 44687 36 100.0 39 .................................... TCATCATTCCCGAAAGTGTTCCGGCTGCAACCCGGGCTA 44762 36 100.0 39 .................................... GAGGCGCTGGCGGAGCATGAAGCGGAGTTCGTCGTTGAC 44837 36 100.0 39 .................................... TCGCGTGGTGCAACCGCTGGCTGGGCAACATCTGGCGGG 44912 36 100.0 35 .................................... ATGCGCTGCTTGCTCATGGTGCAGACGCCAACCTT 44983 36 100.0 39 .................................... TTCTGAACTTCCCATTATTTTTGCATTACGAATATCGAC 45058 36 100.0 37 .................................... TCGTGATCTGATATTGCCCCTGCGCCGTGGCCTTGCG 45131 36 100.0 40 .................................... TGCACCGGCGTGGAGCGCAAGCCCGCCGCGCTGTTCGCGC 45207 36 100.0 38 .................................... CCCTCAGCCAGGAGCGTTTCGAGCTCAGGTCGAATCAC 45281 36 100.0 36 .................................... TAATCATGCCAGTACAGGTTGAGGCACCAATCTGAG 45353 36 100.0 39 .................................... GAAAGCAGCTCGCCGCTAAGGGCCTTAGCATTGGTGATG 45428 36 100.0 38 .................................... CCGTCGACGGTCACGTCGTACTCGGCGTTGAGCGTGGT 45502 36 100.0 40 .................................... CGGAGGTACAGTTTTTCGTCTTCTTCCGCGAGTTCGGGGT 45578 36 100.0 40 .................................... CTGCTAATCCGCAACCCAGAGAACGGTGCGGTGCTCTCCG 45654 36 100.0 37 .................................... ACGGCAAATTGATCGAGCGATCCGGGATTGTGATCGA 45727 36 100.0 38 .................................... GGATACTACCTCCTCTTCCCCCAAGCGAAGCTTAAGAA 45801 36 100.0 37 .................................... ACGACTCATCAGATCCGACATTCTGTACCTCATTAAA 45874 36 100.0 40 .................................... TCGTTGGACGGGAATAGCCCTCCAACAAACAACACTCCCT 45950 36 100.0 37 .................................... CCCGCGTCGATGCGGAACGCGCCGTCGCTGGTCAGCT 46023 36 100.0 40 .................................... CCGCAAAAAAAACCGGAGGTGCGCACGGTGTGCGATTAAG 46099 36 88.9 0 ............A..AAA.................. | ========== ====== ====== ====== ==================================== =========================================== ================== 131 36 99.9 38 CCTTCCGCCTCCTTCGGGAGGCGGCCCCGTTGAAGC # Left flank : GAGGTGTTTGAAGAAGACCGAGCCTACTTTGTGCAGCCGCGAACGTTATTTGGCCCGAAGCGTTGCCAATGATACTGACTCTCTCGGGTGCGTCGACGTCGACATATCCATAGATCCTGACGGTTTGGTGAGATCAGTCTTTGCCAACCTACCCGCAGACATCGCCGCGCCGGAATAGTACGACGACATCGCTCCCGCCGATCGTGCCGCGAGGTGATTCGGTCTGGACCGTGGCGACCTGCTCTGGCATGACTTCAGTGCCAGATCGTGCTTATGCAAGAGGGCGTAAGTAACCCCATACTGTTGCGAGCGTCGATGTGGTGAGAAGATCCCCGGTGATGCTCGTTTTTCGGGGGTAAGTGCTTGTTTTTTAGACGTCTTTTGATACACTGAAAGGCATGGAAACACTCCCTTCCCATAGCACGAACCCCCTGGATTTGAGCGATGCTCGCAAACGCATCTGTCTCGTCCAGTGCTGGCGCGGTGATCGGACAGACGCC # Right flank : CTAGCCTGGGCAGGCTGACGTAGTTTTTCTGGCAATTGAACGGGTTATGACTCTCCGTCGTTAAGACACTTCAACTTTTGAATCAAAAAGCGTATCGATAGCCTCAAAGAGTTGTGATAAACAGACGCCAATATCATCCTGGTGCCCTATCAGGGGGAGCGTTGTGCCGTACCGTATTCAACACCTTCTTAGGCGAATTTATGAGTTCAAAGGCGTGCTCAGGTCGGGTGTGGGTCGGGCGCTCGTCGATCGCTGGAACGTCGTGGTGGGATGGGGCGTCCAGATGCCAGTAGTGACTCGCATCTATGGAATAAATCTAAGAAAGGGGCTCGGATGACTCAGCGCACGTACACCGTCAAAGCGCTCTCCAACCTCTGGACGGGCACGGCTCGCGTCAAAAAGAAGTACAACAAGAGGACACGGCGCAACGAACTGGTTGATGTTGTCGATTCGAGCCGACTCATCACCACCGGGCTCCTCGGCTCGATCCGTTGGTGGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCTCCTTCGGGAGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.60,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //