Array 1 63593-61762 **** Predicted by CRISPRDetect 2.4 *** >NZ_AERF01000052.1 Moraxella catarrhalis 46P47B1 ctg00054, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 63592 28 100.0 33 ............................ CTCAAGTACAGCTTGGGGCAGTGAATCAGCAGA 63531 28 100.0 0 ............................ - Deletion [63504] 63503 26 92.9 6 --.......................... CACACA Deletion [63502] 63471 28 100.0 32 ............................ TCATCAAGACAAGAAAGCTTGATGAAACTGAA 63411 28 100.0 32 ............................ ATTTACAGCTTCATCAATACCAGTAACTTCAG 63351 28 100.0 32 ............................ ATAATTCAAATAATCTTGATCAAATTCCCCTG 63291 28 100.0 32 ............................ TAATATTGCACATTTGAACAAACGGAATAATA 63231 28 100.0 32 ............................ AAAAGGATCGGGCTATGATCTCTTAGGTGCTT 63171 28 100.0 32 ............................ TAAGCTATGCAGGCGGTCAAGCATATGACAGC 63111 28 100.0 32 ............................ TTCAGTAGTGATTTTACTGTCAATAGCTGCAA 63051 28 100.0 32 ............................ TGGTGATGTGCTATATGCTAAGTATGTTTGAT 62991 28 100.0 32 ............................ ATTTGCCATCAGAACCTTTGACGGCGTTCATA 62931 28 100.0 35 ............................ CCAGTCGCTCAGTAGCGAGTTAAGTTTCAGTTTCA 62868 28 100.0 32 ............................ TAGAGGGTTCGTAGTCTTCCACTGAAATAGTC 62808 28 100.0 32 ............................ TGCTTGTTCACGCCCTGCCTGTGGACTAAAGT 62748 28 100.0 32 ............................ GACGATTACACGGCTTGAAGTATTTAGCCGAT 62688 28 100.0 32 ............................ AATCAAATATCTGCTGATGAGATAAAACAAAC 62628 28 96.4 32 ...........T................ CACCCAAAGACATTTCAATTCAGTTACTTAGA 62568 28 100.0 32 ............................ CTGCAAATCCTCTGGAGCTGCTGTCCAGTCTG 62508 28 100.0 32 ............................ AATCATACTTGAGCAATACGAAAACAAGAAAA 62448 28 100.0 32 ............................ TAATAGAACCATCGGTGAGCGGATTAATCAAC 62388 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 62328 28 100.0 32 ............................ TGATGAGTTTGAGTTATACGCCATAAAGCCTG 62268 28 100.0 32 ............................ GCCTTGGTGTTGTCAGTTTTTGAGCAGAACGA 62208 28 100.0 31 ............................ AAAAACCGTTGTGGATAAAATCGCTCCTCTA 62149 28 100.0 32 ............................ GAAAACATGGGCTTTTTATCGCCGTGCGGACT 62089 28 100.0 32 ............................ TTACACGCTACTGACCTACATTTGGGTAGGAC 62029 28 100.0 32 ............................ AGTTTCAAAATATCAACTTCCCCTAGTAGCTT 61969 28 100.0 32 ............................ ATAATTAACAGTTGCACAACCAATCTTAAAGA 61909 28 100.0 32 ............................ ATTGGGAATTATTAAGAGTTTGATCAACAGTA 61849 28 100.0 32 ............................ ATTGACTGAATTTACCGCAGTTTCAATCGTTG 61789 28 96.4 0 ..........A................. | ========== ====== ====== ====== ============================ =================================== ================== 32 28 99.6 30 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACTCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //