Array 1 27419-26159 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000005.1 Coleofasciculus sp. LEGE 07092 NODE_27_length_86798_cov_13.0605, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 27418 37 100.0 34 ..................................... CAACTCCGAGGCTTCTTCGGAAAGATGATCGATG 27347 37 100.0 38 ..................................... CCAGGTAGCTGGCTTGCAATGAGCGGAACGCTTCGTCC 27272 37 100.0 36 ..................................... TAATGGGGCAATTATTTCAAAATTTGAGACAGGAAG 27199 37 100.0 34 ..................................... TAGTTTCAGGAACATCATCTGATAGTTTCCTTTA 27128 37 100.0 34 ..................................... AGAACCCATTGATGAGGAACTTTACCTAAAGATT 27057 37 100.0 34 ..................................... TGCGAACTCAATGGCAATCCTGCTCAAGCCTTTG 26986 37 100.0 34 ..................................... GGGTTTTTCCCGAACTGAGAGGCAAAACAGCCAA 26915 37 100.0 34 ..................................... CAACTATTAAATAGCTGCTCTACCACTGAGCTAC 26844 37 100.0 35 ..................................... CGTGCTTTTCCTTGGGGAAGTACTGCTGCAATTTA 26772 37 100.0 38 ..................................... GTATCAGCCTACTCTGCAATGGCGGCGAATAACCAAAT 26697 37 100.0 35 ..................................... CTATAAAAGTAGCAAAAGTGCTATAAAACTAGTAA 26625 37 100.0 35 ..................................... TTTTGGCTAGAGTCTGCGTCGTAATTTATCATTAG 26553 37 100.0 34 ..................................... AGCTTCGGTCTGATCAGCCAGTAGTTCGGCATGA 26482 37 100.0 37 ..................................... TTAGCAATCTATTTCCGTGATCGCCAAGTTGATGAAG 26408 37 100.0 33 ..................................... ATCCTCATGAGGTAATTTTTGAGGTAGCCCCAG 26338 37 100.0 35 ..................................... CTACTTCTGAATAACAGGTGTGAGGATAGGTATAA 26266 37 100.0 34 ..................................... CTTTTACTTGGACGCCATTCAGGATGTAGCGGAT 26195 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 100.0 35 GTCGCAATCCTCTATAATCCCTATCAGGGATTGAAAC # Left flank : AGAATACGAGCGGATTGAGCGCTCAGAAGTTCTGCCACAATTGGACATCAACCTACTATCTCGGTGTCTGATGATGGCTTCCAAAATTGAGGCATTAAGGGAATTTACACGAGGACTGCGGCGGGGTGAGGGATAAGAGTACTTGAAGAGGTATTTGCGTTAGCTTTTACTCTCTTTGTCCTTATTGCCAGGGTAAAATGGAGAGAATTGGCGGTGAGCAATTGCGAGATAATTCGATTTTTTCCCTTGATGGTGACAACCTGTAGGTGTTTTCTGAAGTTGTTTGGATTTTCGGGCTACATTCCTTATTGGATAAGGGTTTACAGCCTTTACCTTGTAAAGGAGGGTGTCACCGCTTCTGAAAGCCTTACTATGAATGGATTTCAGCCGATTTAAAAATTTCCTCTTGTCAACCTTTGGCTCTGGAATGCTATTATGAGAGGAGACTGTCACCAACGCACCTTGAAAACTAAATACGGTAAGGGTTCTGGATGCCTGCG # Right flank : TCAGTTGCACTAGTGAACACCCCCTCTCCCAATATTGAGAGAGGGGGTTAGAAGGTAAGGGCAAAACCCTCCCTAATCAGTAGTGCCAAGTTGCAACGACTCTTTATCGGTTTGAGTCCATTCCGTATGGAAGACGCCCTCTTTATCGGTTCGCTCGTAAGTGTGCGCACCAAAATAATCACGCTGTGCTTGCGTCAGGTTTTGCGGCAAGCGTTCCCGTCGATAGCTGTCGAAGTAATCTAAGGAAGCACTGAACGCCGGAACTGGAATCCCCAGTTTATTCGCGACTATCAGCACCTCTCGCCAAGCCTCTTGCCGATCCAAAATACTTTGCTTGAACTCAGACGCTAGCAGCAGGTTGGGTAGCTTGGGATTTTCGTTGAAGGCATTCTTAATTTTATCCAGGAAGCCTGCACGAATAATGCACCCACCTTTCCAAATCCGAGCCGTTTCTGCCAAGTTCAGATTATAGCCAAACTCCTCAGACGCTTTACTCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 11421-10880 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000129.1 Coleofasciculus sp. LEGE 07092 NODE_286_length_17201_cov_12.0987, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11420 37 100.0 35 ..................................... TAGCTCATCCCCTATCGTGGGGTAAGTCTTGACGG 11348 37 100.0 36 ..................................... CTCGATGGACTTAAAGTAACCCTGATCGGTTAGGTG 11275 37 100.0 34 ..................................... ACGCCACGAGAGGGATTCAGGAAAGGGGAAGCAC 11204 37 100.0 34 ..................................... TTCCATTTCTTTGATAAATCTTGCACAAATGTAG 11133 37 100.0 37 ..................................... TAGATCAAATAATAGACGTAATCCGAGATCCATATAT 11059 37 100.0 34 ..................................... CGTCTGCCCCAGCGTCTTGGTAATGCACACCTAT 10988 37 100.0 35 ..................................... TGCTTCTTGTTCCCTCAAAGAAGCAAACGCCTTTT 10916 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 100.0 35 GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Left flank : GATTATACGGCAATTGGACCCTCGGTGAATATTGCGGCGCGGTTGCAAGAAGCGGCAGAACCTAATTCGATTCTCGTGTCTGCTTCGGTTGCCGATTGGTTAGATGATGATGCGATCTCTAAGTACCGTCCCCTGAAGTTGAAAGGGGTGGATGAGACGGTTCTTACCTTTGCGGTTCAACCTCTGACAGTTAATTCCACCTAAAAGGCAGTGAGCTACTGCCAGATAATTCAATGCTTTTTTGCTTGATGGTGACAACCTGTAGGTGTTTTCTGAGGGTAATTCATTTTTGGGGCTGCATTCCTTATTCCACAAGGGTTTGCCGCTTTTACTCTGGCAGTGAGGGTGTCACGGTGGCTGAAAGCCTTGCTGGGAATAGATTTCAGCTAATTTTTTATTTTCCGCTTGTCAACTTTTGGCTCTGGAATGCTACTATAAGAGGAGGTTGTCACCAACGTACCTTGAAAACTGAATACAGTAAGGGTTCTGGATGTCTGCGG # Right flank : TAAGCCTAAAGAGGCTCTATTTCCAATTGAAACTCCCCTTACAGCACTTTGCGAGTCAGTAAACCTCTTGCAAAAGTCAAAAACTCACCCCCCTCAATCCCCCCTTATAAAGGGGGGAAGTTAGAAACGAGGGGGGAAGCAAGAAAAATCAGACTCTTTCCCCTTACTAAGGGGAGGGATATAGTGCATTTTTTCAAGAGGTCTAGTGTGGTATAGCATTACAAGTTTAGGTTAGGACATCCCTACATCCTGAAACCCAGTCACAGATTACTGTTTCCTGTTTCCTGTTCCCCGTTCCCTAGCGCGTAGCGCTATACAGTTCCCCCCTTGATAAGGGGGGCTAGGGGGGTAAAAATGGAGTCTATTCACTATAAAACCGCTGTAATCCCTATCAGCGTAGGGCTTCCGGCGTTTTTCACTAAATCTGAAGTTAAGGGAGCTTATTTGGAGCTAAGAGCGTCTATCGTGAAATGTAGAAATTAGCTTCAATTACTTTAACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 14756-14937 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000128.1 Coleofasciculus sp. LEGE 07092 NODE_285_length_17288_cov_12.7134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 14756 37 100.0 36 ..................................... TCGGCTTACCTTTTTAGCTGCTTGCAGCTCATCTTG 14829 37 100.0 35 ..................................... AAGCTATGGGGTGAGGTGCAAGTAGAAATAGCCGA 14901 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 100.0 36 GTTAGAATTACACTGAATCCCTATCAGGGATTGAAAC # Left flank : TCGATAGGGTGCTACACCCAGAAATTTGCGCGATCGCTAAACCTAAGCAGAGACTTGTGGCACGAACAAGCCTTTGGTTTCTGGATGCGAAACTTTTTGTTATCATTTCATTCTTTATCCCTGGCACCTGAGTCAACTCAATTATCGATTACCCCCTAGAGTTGGGGAACTATAGGGTTTCCTAGCGTCGTGAAGTACATTGAGTTTTCTTACCCACTCCCCACTCCTCACTCCCTGAAAGTCTATACTTTGGTGACAACCAGTAGGTGTTTTTCCAGATAGGTCAAAATTTTGGGCTGTATCGGTTATTCTACAAGGGTTTCAGGCTATTCTGGCTCACAAGGGGGTGTCACCAGTCCTGTAAGCCTTGCGGGAAAAGGCTTTAAGCTGCTTTTTGCAGAAAAGTCTTGTCAGAGTCAGGGGCTGAAATGCTAAAGTGGTGGAGGTTGTCACAACTGTACCTGGAAAACTAAATATAGTGAGGGTTTCAAGATGCCGCT # Right flank : CTGGGACGAACGAGATCCCCGACTTCTTTGAGAAGTCGGGGATCTTGCTTGACTTGAATAGAATAGAGTAGATTCTTACTGCCGAGCCACGCCATCTTGACGCGCTGCTTGCTGCACAGCACCCGAAACGGCTGTCACAACGCGCTCATCAAAGACGGAAGGGATAATATGTTCCCGATCTAAATCTGCAACATTCATCAGAGAAGCGATCGCATAGGCGGCTGCCAAATACATATTCGTCGTAATTGTGGATGCCCGACAGTCTAGCGCCCCCCGAAAGACGCCAGGAAAAGCAAGAACATTATTAATCTGATTCGGATAGTCACTGCGCCCCGTTGCCATAACAGCGACATCATCCATCACTAATTCCGGCTGAATTTCTGGGATAGGATTCGCCATCGCCATGACAATCGAATCTTTTGCCATTGACCTTACCATATCAGGGGTAAGAACTCCAGGAACGCTGACCCCCAGAAACACATCGGCATCGACTAAGGCAT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGAATTACACTGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 8835-9460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000181.1 Coleofasciculus sp. LEGE 07092 NODE_380_length_10736_cov_14.0313, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================================================================================================================================================== ================== 8835 37 100.0 41 ..................................... TTCCATCCCAGATCCCATTACCCCAAGCATAAAGCCATCGG 8913 37 100.0 33 ..................................... ATACGCCCAAAGATTGCGGCAATCCTCACACAC 8983 37 100.0 34 ..................................... CAAGTATGCCGAAATTTTCAAAGTTTTGCACTTA 9054 37 100.0 37 ..................................... AACCTAGCAATTTCTAGGAAAAAGTCTGCCATTCCTA 9128 37 100.0 34 ..................................... CTTGATCGATTTTTATTATCTGGCACGGAACTTC 9199 37 100.0 181 ..................................... TCGCTCATCTAATTTCTTGTGGACTCCCTTGATGTTGTTTAAACCTCACATCTTGCACCATTGTCAGTAAACCTGAAAACCCACCCAGAGTTAAAACTCCGGGCTAATAGCTTAAGTCCACTTAAGTGGACTAAAACTCTTATCCAGTCGTCTAAAGACGACTTTAGCTATGAGACAGTGG 9417 37 94.6 0 T..........T......................... | CC,GG,TGG [9422,9427,9430] ========== ====== ====== ====== ===================================== ===================================================================================================================================================================================== ================== 7 37 99.2 60 GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Left flank : CAATGGACAAATCCTGGCTAGTAGCAGTAGAGATAATACGATTAAGCTGTGGGATCTTAGCACTCTGAAGGAAAAGTCTACGCTCAAAACTCATTCAGATACCGTTTATTCTGTGGGGTTTAGTCCCAATGGACGCACTCTAGCCAGTGGTAGTGGAGATGCCACTATTCGGATTTGGCGACTTAAGTAGACCCAGGATTGACTCGTATTGTGGTGATATACTGCGAGATAACTAGATTTTTTTGCTTGATGGTGACAACCTGTAGGTGTTTTTTGAGAAGAGTCCATTTTTGGGGCTGCATTCCTTATTCGACAAGGGTTTGCAGCCTTTGCCTTTTGATGAAGGGTGTCACCGCTCCTGAAAGCCTTGCTATGACTAGATTTCAGCTAATTTCAAGTTTTCCTCTTGTCAACCGTTGGCTCTGGAATGCTATCATAAGAGGAGACTGTCACCAACGCACCTTGAAAACTAAATACTGTAAGCCTTCTGGATGCCTGCG # Right flank : CTATCACAAAATAGAAATTGTACAATGGATTGTTTTTGAAGAGCCTATTGAAGTATCAAGGACTCAGATTCAGAAGTTTAGCCAAAATTTTCCCATGAATGCAAGACCTATTCAGCGGTTAAATAGGCGCTTTTTGTTAGAGTCTTCGCCAGGATAAGGAATTTATTCAGGCTTTAATTCTTGATTGTTATTAATGTTTGTTGACTGAAATATTGTCTCATTTTTAACAAGCCTTTTACCAGTTCCCTTGCTGAACTTATTTAATGCCTTGCTAATCGCTTATTCGCTGGTTAAATTATAGGCTAGTGGTGTGACCAACAAGGAGATTTTGAAATAATGGCTTACGAGCAAGAGAAACAGGTAGCGATTGCAGCGGCACTGGCAGCCGCCAAACTGTGCGAGCAAGTGCGCCATGAAAGGGTGCCGGAAGCGATGGAAAAAAGTGATAAAAGCCCCGTAACCGTTGCTGACTTTGGCTCCCAGGCAGTTATCTGCCGTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 8366-7891 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000187.1 Coleofasciculus sp. LEGE 07092 NODE_389_length_10016_cov_2.85004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 8365 36 100.0 29 .................................... CCTACCGAGGTTAAGAATGCCTTGACTAA Deletion [8301] 8300 36 100.0 37 .................................... TTCACGGTAGCGGTAATTCTGAAAACCGCCTCCAAGG 8227 36 100.0 45 .................................... TCATGGCTCGCCCAGACGTTCTGTTGCCAGGGTCAACCGCAACCG 8146 36 100.0 43 .................................... AAGGCGTAATATCTCTACCCCTTCTGGTGATATTTTGCTGTAC 8067 36 100.0 38 .................................... CTGTGCGGAAATTGTTCGACAAACCACCTGGGTTGAAG 7993 36 100.0 31 .................................... TTGCTCAAGGAGTCGTCAATCAGCAGGCAAT 7926 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 7 36 100.0 37 GTTTCCATTCAAGTAGTTTTCCCAGCGAGTGGGAAG # Left flank : GTGAGGGGGATAGCTAATATTAGCATCGGCACCAAAGGAACGAATTGCACCATCATTGCAACGCCATCCAACTTGACGAGTGCCAACGGTGATGATTAGGGTATCGACGCGGGTGGATTGGGATTGAGGAGTTTTCATTGAGTTTGTCTATATCTGCTTTGCACTCTAACAAAGGAGAAGAGGGAAGTGCTAGGAATTTGCCACTATTGAAGATGACGAATTTTTTGTGATTTATCGTTTGATGAGGGGTTGGAGATGACTGGGGATGATTGTTGATTGATAGCGGCTTTTCCCTTGACGTTTGGGGAAGGAGTCATTCGGGAGTTCCAAATAAAAAAATATTCAATTTTATCCCTGAAAATAATTGTCCCCCGGTGGTGTCGGGGGATTTTTTTTACTACACCTATTGCAAAAGTCGATTTTTAGCGATCGCTTCTTTCGCTGTGTCAATCTAGGCTATTTCTCGCTTGATGGAAGATAATTTATGGCATTGTATGTCC # Right flank : AGTTCGTTCAGGGAGCCTTACGGAGACTGGGTTTCAGCCCTCGAATCGACACACCTCCGGAAATAGTACCATATCCTCCTAAAAATTGAGCCAAACATAGACCTCAAACCCCCTCTCTGTATGGCATCGACACACCTCAACGAAAAATATAGGGTTTCGGGGATTTGCTGAGGTGTGTCGATTGGTAGATTGAACCGCTTTTTTCATGCCATTTTCAATGGTTAGTGGCTTGACTTATCGCCAAAATTAGTATGAATCTTGAAGCACACAGAGGACGCGGGAATAGGGAAAGTGCTGTTGAATGGGGTGGGGAAGAAAAGCGATCGCTTAATTCGAGTTTGCAGGTTGAACACCCAATAAATGCACAGCACCAGGAATCTTGGCTAAATCTTGGAGGAATTGCGATCGCAAATGCTGGGACTGCGGCGTTTTTCCACCCATAAACAAGCAAACAATTTCCTGACAGTTGGTATCTTCTTCTTTATGGGGAATATTCACCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAAGTAGTTTTCCCAGCGAGTGGGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 2397-2071 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000236.1 Coleofasciculus sp. LEGE 07092 NODE_641_length_3936_cov_3.19139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 2396 36 100.0 37 .................................... AGACATAGAGCTTGACAGGTCGTGATTGGTAGACATG 2323 36 100.0 36 .................................... TTTGACGGTAGTGTTACGAACACTATGGTCATTGCC 2251 36 100.0 35 .................................... CGGAGAGGCTCCGTGAACGGAACAACGCTTGTTTG 2180 36 100.0 37 .................................... TGTGCTAGCAATGGGACATGAAATCCCAATGCAGAAA 2107 36 86.1 0 ............GCT........AC........... | T [2092] ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 97.2 36 CTTCCCACTCGCTGGGAAAACTACTTGAATGGAAAC # Left flank : GCATCGACCGAAACTGAGGAGAAACTGGTCACGGTGAATATCAAAATTTCTCGCTCTCAACATCAGTGGTTGAATGAAACCGCTCGTACCGTTCGGGATAATAATGACGAACCTGTGCCACCATCGGAGCGTGTCTTTCCACAACATCTGATTGGTGTGGCTGTTGACTTATTGCAGCGAGAGGATATCGATTGGAGTCAGGTGCGGAATGTGGCAGAGTTACGGGAACAGTTAAACCTATGAGTGTTTTAAGGGCTAATGGTCTAATAGGTTTAGATTTTTTAGGAAAAACAATAGCTTTGCTCCTACTATTCACTCATCGACACCACTCGGAAAATCGCCCAAACCCTATGTTTTTCGTTAAGTGGTATCGATGCCATACAGGGAAAGGATTTGAGGCGGGTGTTTGGTTCAAATTTCAGGTCGATATGGTATGATTTTTTCACTGGTGTCGATTTGGCGGCTGTAACCTTTACTGGGTAAGGGCTGCTAGACGAACT # Right flank : TCCCGCAGCGGAACTGAATCCGGGCGATCGCCCAGCATGAACTATCCCAGTTGCAGAGGAACCAATTAAATCAGCATTCCAGTGGAAGGGTGGGCAATGTCCGCCCTTAATTTTTCTCAAAAACGACTACCCAACGGCTGAAACTTTCTCCCCGTCTACCTTTCAGCTCATCCCATCAAAATCCCCTCCAAGCCTCGGAAACGCAGTCAGAGGATGGATTCACCCCTCGCGCCGATTTCAAGCCCTGTGGAGACGATTTAAAAGGGACATCCCCCAACCCTTATCTGGCAAGCATTTCAGCACATTTCTCTCCCCCAAAGACGCACTACTTCATCAAAATCAATACCCTCCGGCGTCACCTTCACCCCATTAACTGCAACGAATCCCTCAGACACCTGGGGCGGAAAATCTCGTAGTGAACGGTAAAACTCGATAATCACAGCATCCGGCACCTGGCGCTGACGCTGTTGGTTCCACAATAGGCATAGTTCCAGAGGCGT # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCCACTCGCTGGGAAAACTACTTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 34306-33816 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000033.1 Coleofasciculus sp. LEGE 07092 NODE_93_length_50452_cov_12.8212, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 34305 37 100.0 34 ..................................... TTCAAGCTCAAGCCGACTCGACAGCCTCAAGTGG 34234 37 100.0 32 ..................................... GCAAAACCTATTTTTCCCCAGAATGGATATGA 34165 37 100.0 38 ..................................... TCTTCCGCTATCTTTATCAATTTTTCCATTGCTTGTGT 34090 37 100.0 45 ..................................... ACTATTCTTGCGTAGTAGATGCACCAGCGCTGTGCTTTATTCCAG 34008 37 100.0 43 ..................................... CACCTGATGCCCTACAGGACTCCCATAACCGCGATGGTGAGTG 33928 37 100.0 39 ..................................... TTGAGCCTTCTTGGGCAGCTCGGCTCTCTCCTGCAAAAA 33852 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 7 37 100.0 39 GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Left flank : TATTCCAGAAGACAAGCGCCGGACGAAAATCCACAAAATCCTTAAGTCCTATGGGCAGTGGATGCAGTACAGTGTGTTTGAGTGTGATGTAACTGATACGCAGTATGCTAAGTTGCGATCGCGTCTGGGTAAAATTATCAAGCCTGACCAGGATAGCATCCGCTTTTACTCTCTTTGTCGTTGTTGCCAGGGTAAGGTGGAGCGAATCGGCGGTGAGCAATTGCGAGATAATTCGATTTTTTTCGCTTGATGGTGACAACCTGTAGGTGTTTTCTGAGGTTGTTTGGATTTTGGGGCTGCATTCCTTATTGGACAAGGGTTTGCAGCCTTTGCCTTGTAAAGGAGGGTGTCACCGCTTCTGAAAGCCTTGCTATAAATGGATTTCAGCGAATTTTAAAATTTCGTCTTGTCAACCTTTGGCTCTGGAATGCTATTATAAGAGGAGACTGTCACCAACGCACCTTGAAAACTAAATACGGTAAGGGTTCTGGGTGCCTGCT # Right flank : AAGCTCAAAGAACCAGATTGATCAGCGTTGAACCTCATCGACAACATCGCGATCGCATAGTCAGGACTTACGCAAATTTCCCTGTAAACCACTAATAGTAGGGAAACGATATATCATGTCCCTACTAGATGTAGCGTCTGTGCGTAAGTCCTGATAGTGATAGAAACTGATATCTTTAGCCTAAAACCTGAAAATCTTTATCTGTAATGGTTTCAAAGTTTGATCTAGCAATAGTGACACAAATCACTATAAAAGTTGATCGCCATCACTGCCAAAAGAGACTAAAATCACCTTAAAAATAGGAAATTCTCACCAATACGTCCACCTTGAATCACGTTCTTCCTCGACAAAATCCTTCACACTAGATAGAGTCGAGTTCTGCTTTATTCTATGAAAGCCCCAATTCGACTCTTGCCGGGTGCGATCGCTGATCTATTTGCTCAAGTCAGTCACTCTGGTAGAGTGACTCTGGCTGATCAATATGGATTGATGGCAGCCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 18709-18521 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000064.1 Coleofasciculus sp. LEGE 07092 NODE_149_length_36603_cov_12.0258, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 18708 36 100.0 39 .................................... GTGAAGGGATGTACTACCATAAGAAGGAGTAGTGGAACT 18633 36 100.0 41 .................................... TGTAGAAGACAGCTCTTCACCTGTATTGTATTGACGAGATA 18556 36 97.2 0 .........G.......................... | ========== ====== ====== ====== ==================================== ========================================= ================== 3 36 99.1 40 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : AAGCCACCAACGACTTGTCCTGCTTGGCGGATGCACCGGAAGTTGTCTTGACCGATACTTTCAAAGTAGGGTTGCCAATCGGTGAGCGAATCGCCAAAGCACTGAGACAGCAGTTTCCCAAGTTGTTGAGCGTCTTCTGGACTGGAGACGGTGCCATATTCGAGCTGAGAACTCATATCGATGTCGCACCCTTATAATACAATATGTTGTCTATTATACTACAAGTTGGTTCTGGAACAAGAGTGCTTTGCCTCAAATGCCTATCTAAGGTCTTAATAGTTTGATGTATCTAGGTTTGAGGGCAATTTTCAGATGTTTATCGACACCACTCGCCCAATCGCTGAAACCTTATATTTTCCTTTGAGTGGTGTCGATGCCTTACTGGGATAGGATTTGAGGTATGTGTTTGGAGCAATTTTTGGAAGGATGCATTATAATTTCAGTAGTGGTATCGATTTAGCGGCTGAAACCTTTACTGGGCAAGGGCTGCTAGACGAACT # Right flank : CTGTTTGGTTTAGGTACCCATCCTCTTCCACCCTACCGATTGGGTTAAATCTCAGATCTTGCACCATTTGCAATTAGCCATTTGACCCCTCCCCCAACCCCTCCATGAATAAAATCTCAAGAGTAGGAGAGGGTTAGGAAGAGGTGGGAAGGGGGCTGGGAGGCTCTTGTTTTTCGACGTGTTGAGAATGGTGCAAGTTATGAAAGGAGTTTTAACTCTTGCCGGGTTCGCCGATGCAGGGAATGAGCTTAATGCTTTTCAACTCTAATTCGACACTTCCGCCATTTCAATTACGCGCCCTTCCACATCCTTCACCAAAAAATTCAGCGGCTTTTGCTCCCGAACTTTATACTTAAGGCGTCGCATTTGCACTCGCATCAATACCTGTTCGAGACAGTCATGATCAAAACAGACATGACGGTGGCGATTTTTTTGACCGTAGCTTGCTCCGGAAATGACGTGTAACTGCGTATCCTTTTTGAGCTGATACCACAAACCCT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 37736-37122 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000044.1 Coleofasciculus sp. LEGE 07092 NODE_112_length_44816_cov_11.7882, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 37735 37 100.0 34 ..................................... AAGAATGCCAGGGGTGCGGGTTTGGGGATTGTAC 37664 37 100.0 34 ..................................... AAAACCGAGGCGGTAACAAACTCTAGCAAAGGGC 37593 37 100.0 34 ..................................... TGGTCCGAATTTTAATCCTGACTGCTCTTTTAGG 37522 37 100.0 35 ..................................... GTTCGTGATGCTTGTCCCAGGATTATTTTTAAGTT 37450 37 100.0 38 ..................................... GTCGGTTGTTGGATTTGCGTTTTTCTCGACAACCTTGG 37375 37 100.0 38 ..................................... CTCTTGCGATCGCGGCGATTTCGTCCAGCTCATCAATG 37300 37 100.0 34 ..................................... TGGCGAATCCTTAGAGGAAAAAATAGCTAAATCG 37229 37 100.0 34 ..................................... AGAGAATCATAAAGACACGCGACAACGGAGAGCT 37158 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 100.0 35 GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Left flank : ATATATGTTCCGTTCTTACAGGGAATTTTTAAGACTACAGCTCTGTCAGTAGGTGATTTGGGTGTCAGTTTGGTTTTGAGTACTATTGTTATTTGGGCAATGGAGTTGGATAAGGGGTGGCTGCGGCGCAGACAGAGGGAGAACTCTGGAATTCAAATAACTGAACTTTAGCGAGAGTTAGATTGTGGACACTACCTCAGTCTACTCTGTCGGCAGAATCCCCGTGTCTGAAGACCGGAAAGTGTCAACAAGGTGACAACCAGTAGGTGTTTTTTGGGGGGAATCTCTTTTTGGGGCTGCATTCCTTATTCCATAAGGGTTTGCAGTCTTTGCTGTTTCAAGGAGAGTGTCACGGTTTATGAAACCATTGCTATGACTAGATTTCAGACGATTTTTTATTTCCCTCTTGTCACTCTTTGGCTCTGGAATGCTACTATAAGAGGAGTCCGTCACCAACGCACCTTGAAAACTAAAGACGGTAAGGGTTCTGGATGCCTGCG # Right flank : ACAGGGCAGTTATTCCTCATTGACTGACAAAAGTCTAACGCCCTCACCCCCAACCCCTCTCCCCAAGGGAGAGGGGAGCCGATTGATATTCTTGTTCCCTCTCCCCAAGGGAGAGGGCTAGGGTGAGGGCTTTCTAGGCATCTGCTCGCAAGTTTTGTCAGTCAACCAGGCAGTCATTCACTGGCAGAGTAAGTAACGTTTGAATTCCGCAGGGAGGGTGTGTTCACAATCGGTTAGACACTGTTCAACGACTGACGCCGTTACTTCTTCTTCGTGAAAATCTTTAGCCATAAAAATCCGGATAAGTGCCACGTCACCCTGTAAATTAATAGGCTTTCGCCAATCAGTACCACGCCAGAATCCTGGAAGTAGTCAAATACAGCTCTTTATCATGAAGAGGCTGTAAAACGTCCCATCATCCCATTATTAGATTTTAACAAGACTATTTCAACTTTCGATAATTGCCAAGCTCATAACTCCTGATGGCGATCGCATACTAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 7556-6653 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000090.1 Coleofasciculus sp. LEGE 07092 NODE_198_length_28450_cov_18.3039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================ ================== 7555 36 100.0 35 .................................... TTAAGTCTCTTCCCACAATACGAACAAAACCCCTT 7484 36 100.0 48 .................................... TCGACATAAGCCGAGTAATTCCCTGCTGTTGCTTGCCAAGCAAGCAAC 7400 36 100.0 36 .................................... AAGAGGAAGCACCCTCTCATCTATGTCCGTTTTTTC 7328 36 100.0 39 .................................... AAATAATGTAGAACATAATGATGTGTAAAAAATGTGTTC 7253 36 100.0 32 .................................... CGTTTCCATGATTCACCTGTGTCATTCCACCA 7185 36 100.0 33 .................................... AGTGACTGCAGAAGATTTTTGATTTGTAAGTAA 7116 36 100.0 35 .................................... GTTATCACAGCATTCTCATTGTTATTCTTTAGTGC 7045 36 100.0 31 .................................... GTTGAGTGTTCCCCGTTGTGTACTTAGTGAA 6978 36 100.0 32 .................................... ATTTGTACCCGAAACGTCTCCGTTTCGGTTAT 6910 36 100.0 39 .................................... TCATTGAGTTTAACCTCCTAACCTTCCAATTTAGTAACC 6835 36 100.0 33 .................................... ACAAGGACTGGAAGGATTTGCATCGCATTTTCG 6766 36 100.0 41 .................................... AAATTTCATGAGAATGAATCTCCAAAATACTAAGTTTTCAG 6689 36 100.0 0 .................................... | T [6655] ========== ====== ====== ====== ==================================== ================================================ ================== 13 36 100.0 36 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : TGGAGGCAGAAACCCCGATGATAAGCGTCCCAAATTTATCAGTTTTGTGTGGCATCGGATGCTACCACTAGATGGCAATCGCTATCTAGAGATTGTGACGTTGTTTCATGGTGGGAAGTCGGGTAATAAGGTGGAGTGGTTAAAGTCTTGGCGGCGGCAAGACTCAAACGGTAAGGGAGAAAACCAGTTACCCCTGTTTATTCAAAAACTCAATGGTTTGGGATTTGAATTCACCTGGGGGACTAAACCTCCCATCTAGAATCACGCACCGTCAAGGTATGATGGTATCTAGGTTTGAGGGCAATTTTCAGATGTTCATCTACACACCTCGGCAAATCGCCGAAACCCTATGTTTTTCGTTGAGGTGTGTCGATGCCTTACAGGGAAAGGATTTGCGGTATGTGTTTGGAGCAATTTTTGGGAGGATATGTTATTATTTCCAGAGGTGTGTCGATTCGGCGGCTGAAACCCTTAGTGGGTAAGGGCTGCACGGGCGTACT # Right flank : CCCCCTTCCAATAAGCAGATAGCTTAGAAGAAATCCTTCATAATTTTGGTGGGGATATATTATGAGCTTGGATTTCGACTGGTTGCAGCTCTTCTACAAATGGATTTTTAACCGGAAGTACCGCCTTCATTTAACTGGGTTTCGTCCGGAGGTTATCTGCTTCATTCAATCGACTGACTCCGAAAAAAATCATCTGTTAGTGCAGCCCCAAAGCGATCGCTCTATCTGGATGCCCCCCCAAGAAGGAATGGATCTAGAAGAAACTCTCAAAGCCTCTTCAATGCGCTGCTTGAATACAGAATTGGGACTAACAGAGTCGGAAGTTCAGTTCCGACGTAGTATCTGGGTAGGCAAGCGTTTATTTCCCTCCTATCGCAAAGACGAACGTGACTTAAGTTACTCCCTACGCGGGTGGGTAGACAAAAATCGAATGATTGGAAAAGCTTATTTTGCAGCACTAATCATTGTTGATAGTCAGGCAGTGATTCAGCCCAACCCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 24817-23185 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWY010000090.1 Coleofasciculus sp. LEGE 07092 NODE_198_length_28450_cov_18.3039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 24816 36 100.0 36 .................................... TAAAGAAGTAGACATGATGATTAATTCTCCAGAAAA 24744 36 100.0 37 .................................... TTTCCGCTCCGGCTTGGCGTAATGGGTCTTGACCATA 24671 36 100.0 31 .................................... TATCGATATTGGTGGTTTGCGCGGAGGCGGA 24604 36 100.0 33 .................................... TTCTGAACCATCAGAGAAGCGGAGCTTCACCAA 24535 36 100.0 42 .................................... GTTCATCTTCCTTATGGAAGACTACTATTACATAAATCCGAA 24457 36 100.0 38 .................................... TTTAAGTTAGCCATGGTAATTCGAAATCCTTAATAAAA 24383 36 100.0 38 .................................... CTTCCACAAGCGTCCGTGAGGTGCTTGTGGATTGAACG 24309 36 100.0 40 .................................... TCTATGACCCCCTTGGTAGGTGCGTTAGCGAACTGATACA 24233 36 100.0 37 .................................... GGGTGATGGCAAAGTAGCCATCGACACCCTTTCCACC 24160 36 100.0 35 .................................... GTCTGCACGGCAGCTGATTCCGCGCCGTTGTTGGA 24089 36 100.0 40 .................................... GCTGGAGCAATGCTACCAACAACAACAACCAAACCAGCAA 24013 36 100.0 35 .................................... GCTTGTTTGTGCAGAAGCAATGTTAGCGATAAAAC 23942 36 100.0 39 .................................... ATACCCGACAATACCAGTGCTGGACTCAGTCTCTGCAGA 23867 36 100.0 37 .................................... AATTTAGTTATATCCCCATTCAGTTTGAAACCCTGGG 23794 36 100.0 39 .................................... TTCATAATTCCCATCACCATCTGCATGAGCTGGTGTTGC 23719 36 100.0 41 .................................... GAGTTTAACCTCACTGACCTTCCAGTTTAGTAACCCTACAT 23642 36 100.0 38 .................................... TCGTCTTCACCAATACCATTGTAATAGTACTTCATTTC 23568 36 100.0 38 .................................... AAGCTAGAAACTCCTAGAACCTCCACTCCTCCTGAATA 23494 36 100.0 36 .................................... TGGAAACCCTTTGGCTTCCAAATGTTTGAAAATCAG 23422 36 100.0 31 .................................... TTCTGTTTCTTGCGTCAATGGAAGCACTGCC 23355 36 100.0 34 .................................... CAAATGCTGGGCAGCATTGGCAACAATCAGTCCA 23285 36 97.2 29 ...........................A........ CCAAAGAAAAGGTCTTCTTCATGAGAAAA Deletion [23221] 23220 36 80.6 0 ...........................AGCA.T.TT | ========== ====== ====== ====== ==================================== ========================================== ================== 23 36 99.0 37 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : GTAAAATGTTAGTGGTTGTTGTGTATGATATTCCTAATGATAAAAGGCGAACCAAGTTGTCCAATTTTCTAGAAGGATATGGGCGACGAGTTCAACTTTCTGTGTTTGAATGTTTTTTAAGTTTGGAGGAAATGCGGCAGCTTTATGGAAAGGTGAAAAAGTTAGTTGAACCCGTGGAGGATAATGTGCGGTTTTACTGGATATCCGAGGAAGCGGTTTCGAGATCGTTGGTGATTGGCTCAGAAGCACCCCAACCACCGCCAAAGTATTATGTTATCTAGGTTTGAGGGGTTTTTGAGGGGGATTGTCAGATGTTCATCGACGCATCTCGGCAAATCGCCCAAACCCTATATTTTTCGTTGAGATGCGTCGATTCCTTACAGCGAGAGGGTTTGAGGTATGTGTTTTGTTCAATTTTGGGGAGGAAATGTTAGACTTTTAAGAGATGCGTCGATTCGGCGGCTGAAACCCTTACGGGGTAATGGCTGCACGGGCGTACT # Right flank : GAGGGTGGGTAATTCTCACCCTTTTCCCTTGAACTGGCACAAAGCACTAGCCTAGCCGCGCAAGAGCGAAAATATTTCCTGTTTGCTGCCTGTCACGCTGACAGGAATTTAAAGCATTTTGTAAAAGTTGGTGTGTGGGTTATCCTCTTGTAAAATCTATGAGGTTTTGAGCCGCAGTTTAGTCAGCGGCTAAGTTCCTATTGGAGGGAAGACAGTTAATCGTGGTTGATCGGGTGTCATTAACACAGGAAGCAATTCGCCTTCTCGATATCCTTCGCACAACGTCATTCAACGACTGTTATCCACTCAGTAGAGAATTCAGTGAACTACCCAATCGCCCTGGTATTTACGCAATTAAGCACAGATCCCAAGGCATTCTGTATATTGGTAAATCCGGTAATGTCCGGAGCAGGTTAAGGGGTGGGCATAAAGCGTTAGGTTGGGCATTTATCGACAGACTTGACCCTGATGATGTGCGGATTGCTGTCGCCAGAGTATAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //