Array 1 9613-13130 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHJS010000001.1 Streptococcus salivarius isolate AMBR074, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================= ================== 9613 28 100.0 33 ............................ TGAAGCTCCAGTTTTGGACAAGCCAGAATGGAA 9674 28 100.0 33 ............................ CAACACAACCAGTGGCAGACACTCAACCAGCCG 9735 28 100.0 33 ............................ TCGCAGTAAAATTACCGTCCGATTTCGCACTAA 9796 28 100.0 33 ............................ TACTGATGCAGTGTCTCCCGATTTGATGACACA 9857 28 100.0 33 ............................ TGCTTATAAGCACAAGTGGAGAAAAGGAGAGAA 9918 28 100.0 33 ............................ CGAAAACCTCTTGATTGAGTTGGAAGAAGCGAC 9979 28 100.0 33 ............................ TAATTTGGATTTGTGCATCTTTGTCGCATCGCT 10040 28 100.0 33 ............................ TGAAGTTGATTAATTCTTCAAAAGGAACATCAT 10101 28 100.0 33 ............................ CAAGACGATGTGATTGAAGGAGAAATCTTATGA 10162 28 100.0 33 ............................ CCAGCGCCGGTTCTTTTTTCTCTGGTTTAGGTG 10223 28 100.0 33 ............................ CGGATAACCAAACACAAGCCCCTGCACCAACAC 10284 28 100.0 34 ............................ CAAGCGGCACCTGTTGACGTGACACCACGGGAAA 10346 28 100.0 33 ............................ CAAGGCTTGTGGTATGTAGACGACGACGGGCAC 10407 28 100.0 33 ............................ CGTCTCGCCGTCAAGCTGTTGCAAATCTGTTAA 10468 28 100.0 33 ............................ TGGATGATGTTAAGGAGTGCCATTTCACGGATA 10529 28 100.0 33 ............................ TGAGGAAGTCGATGATCAATAATGTCGAAGAAT 10590 28 100.0 34 ............................ TGGACAGACGTAGTCACTCCGGGCAAACCTGTTA 10652 28 100.0 33 ............................ TACTACGACGGAGAAGAAGAAGTTACTGAGGAA 10713 28 100.0 33 ............................ CGCCATGATGTTCGACGGTAAACCTCTTACAGA 10774 28 100.0 33 ............................ TCGAATAGAAACCAGTGGTTTTGTAATCATTTA 10835 28 100.0 33 ............................ TCATTGCCTTTCCAAATGGCGTTGAGGTGTCGA 10896 28 100.0 41 ............................ CGCTCTGACATGTCGCTTAAGTTGTTTTCTAGTTTTGCTAC 10965 28 100.0 33 ............................ CCCAACACACAAACTGGTTTTCATCAACTATGA 11026 28 100.0 33 ............................ CCATAGTTAGACCACGAGTTAGAATCTTTAAAC 11087 28 100.0 33 ............................ TAAACCTTGTTCAGCCAAAAATTCATTATCAAA 11148 28 100.0 33 ............................ TTGTTGCTTATGTCTCAGCAATGATTATTGATA 11209 28 100.0 33 ............................ TCCCCCTATGGAAAAGCACTCAGGAGGACGTAA 11270 28 100.0 33 ............................ TGATGAGCATATTGTCCATTCTCATCAACAGTA 11331 28 100.0 33 ............................ CCAAGCTCAGAGATGCCCTCAATGAGCAATACG 11392 28 100.0 34 ............................ CGCCCTGCCCTTGAGCAGCTAATAAGAGATGCAA 11454 28 100.0 33 ............................ CGCCGTTATCTTTATCGAAAATTGGGGCTTGAA 11515 28 100.0 33 ............................ CGACATACCGGATGCAACAACTGGCCGAGGTAC 11576 28 100.0 33 ............................ CTCAATGTCAGTGAGTTTTTGATTTGTCTTCTT 11637 28 100.0 33 ............................ TGTATTTCTTATATAGGGCATCGATGTACCCGT 11698 28 100.0 33 ............................ CGATGCGCCTAAGGTGGAAATCCCAGAATGGAA 11759 28 100.0 33 ............................ CCCATGGATGCTCATCAATACCGTGCGCATAGA 11820 28 100.0 33 ............................ TGGTCGGCGTGTAACGTCATTCGGTTCATTCGC 11881 28 100.0 33 ............................ TAAGCCGAGAAGAAGCAGTGCGGACAATATCAA 11942 28 100.0 33 ............................ CGGACGCTAATGTGTGGCCGGACGACAATCACG 12003 28 100.0 33 ............................ CCTCTTGCGGCACGATACACACGAAGTCCTGCG 12064 28 100.0 33 ............................ TCGACTTGAGTGGATTGAGAACAATTTGGAGAA 12125 28 100.0 33 ............................ TACTAGCCCCGTATGCTGATAACATAGCGAAAA 12186 28 100.0 33 ............................ CACGCTGAGGAGCCCAATCATTGCCTTACCAAA 12247 28 100.0 34 ............................ CGCTATATCATAGTTACAGTTACACACCCTACGA 12309 28 100.0 33 ............................ CGTCCAAGAGTTCAGGAGTTGTTTGATTATGCT 12370 28 100.0 33 ............................ CCCATGGATGCTCATCAATACCGTGCGCATAGA 12431 28 100.0 33 ............................ TGGTCGGCGTGTAACGTCATTCGGTTCATTCGC 12492 28 100.0 33 ............................ TAAGCCGAGAAGAAGCAGTGCGGACAATATCAA 12553 28 100.0 33 ............................ CCTCTTGCGGCACGATACACACGAAGTCCTGCG 12614 28 100.0 33 ............................ TACTAGCCCCGTATGCTGATAACATAGCGAAAA 12675 28 100.0 34 ............................ CGCTATATCACAGTTACAGTTACACACCCTACGA 12737 28 100.0 33 ............................ CGTCCAAGAGTTCAGGAGTTGTTTGATTATGCT 12798 28 100.0 33 ............................ TGATGGTGTTTCATCATTTGCACAAGGAACACT 12859 28 92.9 33 ........T...........A....... TACGGATGCAAATTTTGACAGCATCTTCAAAAT 12920 28 89.3 33 ........T.....T..A.......... TGAACCTGTTAAACCAGAAATTCCATCTGTAAG 12981 28 92.9 33 T...................A....... TAGTTTTACGTCCTATCTCATGTACTTCTTCAG 13042 28 89.3 33 .C.................A...T.... TAGACTTCTTCGCTAGATGACGATTTACTTGTT 13103 28 71.4 0 ........T.T...T.T.A.TA....T. | ========== ====== ====== ====== ============================ ========================================= ================== 58 28 98.9 33 GTTTTTCCCGCACACGCGGGGGTGATCC # Left flank : GAGAAAAAGAATACAATTATTGAGATTGGAGCAGTCAAGTTTAATGGACAACAAGTAGAGGAATTTAATGCTTTGATTAAGTATGAGGAGAAATTACCTCCTACAATTTCTAAATTGACAGGAATTTCTAAAACCTTATTAGATAAAGAAGGACGTGATTTAAAAGAAGTACTTTCTGAATTCTTATTATTTATTGGTGATTTAACTATAGTCGGCTATAATATCCATTTTGATATTCAGTTTATCAATAATAAACTGAATAAATTAGGTTTACCCTTATTAATAAATAAAACTCATGATATAATGAGATATGTCAAGAATGAGAAGTTATTCTTGGATAATTATCAATTGCAGACTGCCCTAAAGGCATATGGGATCGAGGATCAAGTTCCTCATAGAGCGTTGAAAGATGCTAGACTAATCTATCATTTATCAACTAAAGTAAATAAATTCTTAGCTAGAATGAAAGAAAAGTCTTAATTTCATTGAGACCTTTTAGT # Right flank : CTATTAATTAGGAAACGCCTGACTTTAGCTAACAGTATGGTACAATTTAATTGAATTAAGAGTGAATTTTTTGTTTTTTTATGGAAAATAATCAATTTACATTTATCCTATAGTTAATTGTTTGCACGTAGATCAGATGTAATCAAGGATTGTTATTGCTCGATTTGAGAATAGGAGCATTTGTTATTATCTCTAATTGTACAATTGTTAAAAAAACAATTAATCTATTTCGGGAGTTTTAAAGATTGTAGATATAGAAAGTAGTAGTTTGATGGAGAAACAAACAAAAGTTTAATGCTATCGAATGACATATGATTATGGCATTAATCCGTTTGTATTTACTGAAGATTATGAATCCACACCAGATTTGTTGACTGAAGATGGCTGTATGATTCAATACGGCAACATCTAAAAAAGAATTGGGCTGATAGGATTAATTCTGGTGGTATTGATGCTTATATAATGGCAATTGCTAGGCATTCAAATGATGGTGGTAAGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //