Array 1 45473-44051 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBKS01000010.1 Streptococcus agalactiae strain DE-PW-406 ctg7180000003481, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45472 36 100.0 30 .................................... TGCCTTGTGGAATATCTACTAAACAGCCCG 45406 36 100.0 30 .................................... AAAAGAATAAGTATATGTTCTCATCTCAGA 45340 36 100.0 30 .................................... GATATGGTGGACAGGTTCAGCAGGTCATGT 45274 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 45208 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 45142 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 45076 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 45010 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 44944 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 44878 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 44812 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 44746 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 44680 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 44614 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 44548 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 44482 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 44416 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 44350 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 44284 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 44218 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 44152 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 44086 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //