Array 1 5144-6631 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZWZ01000024.1 Neisseria meningitidis strain Neisseria meningitidis isolate B309, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5144 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 5210 36 100.0 30 .................................... TTCTATTATAAAAGCTGCCTGACTTACTCG 5276 36 100.0 30 .................................... TTCTATTATAAAAGCTGCCTGACTTACTCG 5342 36 100.0 30 .................................... TTCTATTATAAAAGCTGCCTGACTTACTCG 5408 36 100.0 30 .................................... GGCGGATGGCATACGGCGTGCCTTTTCGGT 5474 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 5540 36 100.0 30 .................................... CCGTCACTACACGAACTGGCGGACTTCTTG 5606 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 5672 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 5738 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 5804 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 5870 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 5936 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 6002 36 100.0 30 .................................... CTTTCACTTCAGTAATGGCTTCGGCATATA 6068 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTTCTATACA 6134 36 100.0 30 .................................... GTGGGAGTTCGTCTATGAATTCGATGGCGT 6200 36 100.0 30 .................................... TTTGCTGCCCGACAATGCGCGTCCGCAGAT 6266 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 6332 36 100.0 30 .................................... TTCCAAAGTTTTAATTTATATTATTTTAGT 6398 36 97.2 30 ............................A....... CAGAAGATGATAACTGTGCTGGGGGTGCGT 6464 36 100.0 30 .................................... ACGCAATAACGGCGAGTTTACGCATCAATG 6530 36 100.0 30 .................................... TAACGATTGAAAGTGAGTATGTATTAAGTA 6596 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTGTCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //