Array 1 1-356 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818095.1 Prevotella sp. HMSC069G02 Scaffold19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1 30 100.0 35 .............................. AAGATAATATTGCGGATGAAGTAATACAACTGAAG 66 30 100.0 36 .............................. GCATATGACCGTCGAGTTCCATTCTGATTGTATTGC 132 30 100.0 35 .............................. AATTTGTGTTCGCAAGCTCACCTAATAGCAACGCT 197 30 100.0 35 .............................. AAAAAAATTGCATCTGACAACGCTCAACAATAGGA 262 30 100.0 35 .............................. ACTAATCCTAAAGCAGGAGTTCAATATAGTATAAC 327 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 11198-12005 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818145.1 Prevotella sp. HMSC069G02 Scaffold144, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 11198 30 100.0 36 .............................. CAAAAACAGAGCAGTATGGGGACTTGCCATATTGGT 11264 30 100.0 34 .............................. ATTTTCCGTCTTTGTCATAGACCGGCACACTATC 11328 30 100.0 34 .............................. GAAATGGAAGCGGTGCTGAAAGATATTGTTTCTT 11392 30 100.0 36 .............................. TGTGTATCAGGATAGATTGCTGCACCACTTGCCTCT 11458 30 100.0 34 .............................. ATCTTCAATTACAAGGTCAAGGTACATCCTCTAT 11522 30 100.0 35 .............................. GCATTGCCTGTGCGGTTGTGAATAAAGGAGAAACA 11587 30 100.0 34 .............................. TTCTTTGTACTGTTGGTTATCGGATATGCCATCA 11651 30 100.0 36 .............................. TTGAGCGAATTAGCGAGCTTGCGAAGCGTCCTATAA 11717 30 100.0 36 .............................. GTGATGAGATTGAACGTATACTAACAACAATAAAAA 11783 30 96.7 34 .............................C ACAAATGAGATGAAAGGGAAGGAATTACGCATAG 11847 30 96.7 34 ............T................. GAAGATGTATCCCGGCATGACACGCTGGCAAGTA 11911 30 93.3 35 ...................A.........C CGCAGATTGGTTCAAGTAGTGATTACGCGAACGAT 11976 30 70.0 0 .....T........GC..C...T..T.GGC | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 96.7 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : AATCGAGCATCTATATCAAGATGCAGGCTGGCGAGGAGTTATAATTGAACCTTATTGGAATTGAAATATGTGATCATCAACACGCCATTGAAGCCTTCGTGCGTGTTATAATTGAACCTTATTGGAATTGAAATAGATTGCACGTCTTGACCGTAGGAGAAGACAGCGTGTTATAATTGAACCTTATTGGAATTGAAATCAAGTGATGAAACAGAAGACTGTTACATGGAGTTAGTTATAATTGAACCTTATTGGAATTGAAATAGACATATTTGCTGTTGTCGGCATTACTGTTGCTCAGTTATAATTGAACCTTATTGGAATTGAAATCTTGGAGAATAAGGAAGGCCGTTCCCCATTCAAGGGTTATAATTGAACCTTATTGGAATTGAAATAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT # Right flank : CGTAATAGACATTCGGGAGGTTATTTACCTGCCAAACATCTATTACGCCAGCCGGTTTATTCCCAATATTCCTTATCAGTCTTGATGTCAAGCCAACCGGGAATGCCATTTTTGGTGATGTGATAAAAAGAACGGGTGGTTTGTTTTATCTCGTCATAGACGGGGGCTTTGTCACGGGGGAAGATCCCTACTTTATTATCTTTGTAGAAATAAATCAGACCATCGGACTGCATGATGATAGAGTCGTTGTCTATTGGAAAGATTATTTTTCCCGTGACTTTAACGGTTGGGTAAATCTCTGTTTTCTCATCCCAATCATATACACGTTTGGTTATTAACTTCGGTTTCACATTCTTCGGCTGCTTATATTCATAGGCCACGATGCCGAATTTCCCGTTTCTGCCTACTCTTATCCATTCTGGGTGCATGTCAATCTCACCGATAATCCAGCTGTTTCCAGTGCGGTGGTATGATTTCTGGCCATCAAGGAATGCCACAGA # Questionable array : NO Score: 9.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //