Array 1 38510-36327 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCXV01000114.1 Acinetobacter baumannii strain ABUH505 ABUH505_NODE_34.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 38509 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 38449 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 38389 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 38329 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 38269 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 38209 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 38149 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 38089 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 38029 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 37969 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 37909 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 37849 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 37789 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 37729 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 37669 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 37609 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 37549 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 37489 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 37429 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 37369 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 37309 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 37249 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 37189 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 37129 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 37069 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 37009 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 36949 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 36889 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 36829 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 36769 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 36709 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 36649 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 36589 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 36529 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 36474 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 36414 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 36353 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 37 28 98.5 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 43600-43987 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCXV01000114.1 Acinetobacter baumannii strain ABUH505 ABUH505_NODE_34.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 43600 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 43660 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 43720 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 43780 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 43840 28 100.0 32 ............................ ATGAACAACGATAATTTGGAATACACGTTCAA 43900 28 89.3 32 ..................C.A...T... AAAATAAATATAAAGAAGAAAGGATATATCAA 43960 27 85.7 0 .A.........A......-.....T... | A [43981] ========== ====== ====== ====== ============================ ================================ ================== 7 28 96.4 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : A # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 33-2641 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCXV01000090.1 Acinetobacter baumannii strain ABUH505 ABUH505_NODE_58.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 33 29 86.2 31 ....G.....T.CC............... TGTACGATAAGTACCAAAAGGTTTGCAAATG 93 29 89.7 31 ....G.......CC............... CAACTTAAATGGATGCTCCCCGCGGTGAATT 153 29 89.7 31 ....G.......CC............... TGATTGCTAGACGGATTTTTAGGCAGATCAT 213 29 86.2 31 ....G.......CC..............G AGTTTAATGCGCTATATGGCGACGAGGATTT 273 29 86.2 31 ....G.......CC..............C ATGCAATCGCGTTGATTACCGCAGCTTCGAA 333 29 86.2 31 ....G.......CC..............A TGAGCCGCAACCATACGGTCTATGACTTCCA 393 29 86.2 31 ....G.......CC..............A TAGCGCCCTGCTCTATGTTGTCACTTCCGAA 453 29 89.7 31 ....G.......CC............... CCAAGTGAATCGGCTCCTAATGCAAATGACC 513 29 89.7 31 ....G.......CC............... GAAAACCAATATGCTGCCTAATTGCCATAAG 573 29 86.2 31 ....A.......CC..............G ATCTGCGTCCATTTGTACTTGCTGCGGGTGC 633 29 96.6 31 ............................A TATACAGCACCGCTTAGTGCGACGCGGTCAT 693 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 753 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 813 29 96.6 31 ............................A GAAGGCCCGTAATTTAACTGTAAGCCGTGGT 873 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 933 29 93.1 31 ......T.....................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 993 29 100.0 31 ............................. TCAGGGAATTATCGTGAAACTTTCATTGACT 1053 29 100.0 31 ............................. GCACCAGCTGCTGGCTGGTTGAAATCTGCAA 1113 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 1173 29 100.0 31 ............................. GTTTCAAAAGCTACACCATCAAAACCATTGC 1233 29 100.0 31 ............................. ATTTAAGTAATAAGTTTAATAACGACCTAGT 1293 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 1353 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 1413 29 96.6 31 ............................G CCTGCAGACACGGATTTACGCAGCTGATCGA 1473 29 96.6 31 .........................C... AACCAAACTATGTCATCGATCGGAGATTTCA 1533 29 100.0 31 ............................. TAAAATAAATGCCTGTGGTTTTTTCTTAACT 1593 29 96.6 31 ............................A GTTTCCGAAGTTGAATTACACTCGCCAAGTT 1653 29 100.0 31 ............................. AACACAGTGATTTGATTACCTTGAGCAACCC 1713 29 96.6 31 ............................A TCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 1773 29 100.0 31 ............................. CATCCACCTTTGATGAAACGGATCCACGCAA 1833 29 100.0 31 ............................. CTTGTGTGACGGCCTCCACTCCAGATCCCGC 1893 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 1953 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 2013 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 2073 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 2133 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 2193 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 2253 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 2313 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 2373 29 96.6 31 ............................A TCATCAATAAGTTGGCCTTGATTTAAATAGT 2433 29 96.6 31 ............................A GATACAAACGAGTTCGCATCTCGACCAGAAG 2493 29 96.6 31 ............................A TTATCCAGATAAAACCATATCTACAAAGTGG 2553 29 100.0 31 ............................. CAACCTGAACACAGACATACATGTTCTATTG 2613 29 86.2 0 ...GC...................AT... | ========== ====== ====== ====== ============================= =============================== ================== 44 29 95.6 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : TTGGATGCTCTTATAGCTGAAGTAGACATAACG # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //