Array 1 121771-123456 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGAK010000001.1 Leuconostoc lactis strain SBC001 SBC_2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 121771 36 100.0 30 .................................... CTTTCCAATCTCGTTTGAAGAGTTTGAAAT 121837 36 100.0 30 .................................... TTATGGGAATTGTAAACGCTATCCCACGTC 121903 36 100.0 30 .................................... GCCGTTTGAGTTAACACCATAGCCACTGAT 121969 36 100.0 30 .................................... TTAAACCTTGATAATACTGACTTTATAACT 122035 36 100.0 30 .................................... CTTGACCACTGATTGCACTAGCGATATATG 122101 36 100.0 30 .................................... GTGATTCAGCAATTTCTGAAGGATTGTACT 122167 36 100.0 30 .................................... CGTTGCGTTGCGTAGTACACTTCTTCTTGC 122233 36 100.0 30 .................................... CGGTCTAAAATTGTAAAGCTCTCAATTGGT 122299 36 100.0 30 .................................... TTCCATAGCGACAACAAGAAAACGGATAAG 122365 36 100.0 30 .................................... TGTCCATTGTGTTAGTCCTCCTTTACTCTG 122431 36 100.0 30 .................................... ATACGTCAATTATGGCTGGATGGTTTGCTG 122497 36 100.0 30 .................................... ATGTTGGTAGTTGGATTGGCGATAAGTTTG 122563 36 100.0 30 .................................... CAAAAGATTGTCGTTAACGCTGTATATGGT 122629 36 100.0 30 .................................... CCTATGCAACAAACAAAGCAAATGGAACTT 122695 36 100.0 30 .................................... TTGCCCAAACTTTAGCAATGACACTCATGG 122761 36 100.0 30 .................................... GAAAGTAGTAGACAAGCAGGTATTCATAGT 122827 36 100.0 30 .................................... AAATCAATCCATACATCGGCACGCAACCAA 122893 36 100.0 30 .................................... CATAACTTCGCCACTGTCAATTGCGTCTTG 122959 36 100.0 30 .................................... ACGGTGGAGTACCTAACATGATTGTGGAGG 123025 36 100.0 30 .................................... TGGGCAAGGCGCTGGAAAAACTACCATGCT 123091 36 100.0 30 .................................... ATATAGGAGAAACGTTAATTCCCATCATAG 123157 36 100.0 30 .................................... GCCATGTGATGATATTCTCTGACGTCAATA 123223 36 100.0 30 .................................... TGGTGGTGGCGTTGTGGTGGCGCGTGGCTC 123289 36 97.2 30 ...................C................ AACTAATGCGCAAGCGATTGGCGGAGATAG 123355 36 100.0 30 .................................... TAGCCCCGACACCAACAAGCATCAGCCCGG 123421 36 94.4 0 ..............................A.A... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.7 30 GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Left flank : AAACCATTGCGGCAATTATTAACCCAACATTTAGATGATTTACATTTGCGCGAATTGTATGAAACGGATCGAACTATACGTAGCATCGTCCAGCGCGTGTTATTTGAGAATGATTTGCCGGGTGAGATTGACACGGAATGGAATATTTCAGAGCTCTTGAAGTACTTGAAGCTACGCGTAGAACTCCCAGAAACGCACGGATTTTATGGTATAATAGAAGAAATCATTGATCTTTCTCAACGCCTGAGTGATGACAGGTTGTTAGTGTTTGTTAATGCGAGTGTTTATTTGCGTGATGAACAGATCCAAGCACTTGCATACGATGCAATGTTGAAACAAGTCTCGTGCTTATTTATTGATAGACAAAATACTGTTAATTTTATTGGTGGTAAAGGGTTGAAGCAGATTTTTATTGACCATGATTTCGTACAATTTGTGAGTGATGACACAAAAAACGAATAGATGTTTGATAAAATACGTTGATTACGAACAACTGGTCT # Right flank : CAAGATACACAATTAAAAGAGGTAACTAATGGATAAACTATTAACGTTTATTTTGATAATTGCCGCGCCATTTATCGTGATTGGCATTGTCTATTTGTTTGGCTGGCTTCTGACTGGTCTTATCATGCTGTTTGGTGTAAGCTATGCAAGCGCAAGGCTTGTAGGCATTGCTTTAGCGGTGTTGATCAGTTTTGGTTTTATCGGTTATCAGGGATTTAAGTAAATGGCCTTGTATACCATCGTAATGAACACATAGCCAAATACAAAAGCCCCTCACACGGATTAACGTGTGGGGGGCTTTTTACTACTAAACAATATAATCCGCGTACAACTTGCGTTCCAACTCGGACAATTCAACGGTAATCAACGTCCCCGTCTCATCATAGTCCTCTTTGCTAAAGGTATGCTTAGCGGCGAGTTTAGCTTGCACAGCGCCTTGGTCAAAGGGGATGTGGAGCGTCACTTCTTGGACATCGTTGAAGATTTGCTTCTTGATTAGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //