Array 1 24809-18769 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOHJ01000013.1 Vulcaniibacterium thermophilum strain KCTC 32020 Scaffold13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 24808 28 100.0 32 ............................ GCAGCTCCGCCACCACGCGCTCGTCGTACAGA 24748 28 100.0 32 ............................ TGCTGCTGCTCTCTCTGTGCGCGTCGTTTGTG 24688 28 100.0 32 ............................ GATCTTGTCCAGCTTGGCGCGCGCCATCGGCT 24628 28 100.0 32 ............................ TTGCACCCGATCTTCCAGCACCTGATCGACCA 24568 28 100.0 32 ............................ GTTTCGCGACCCAGATGGACGCGTGGGGCAAG 24508 28 100.0 33 ............................ GCCTTCGCCAGCCAGTGCGCCCAGAAGGACCAC 24447 28 100.0 32 ............................ GACGAGATCATGGGCGTCACCGGCGACCTGCG 24387 28 100.0 32 ............................ TCAACGTGCCACGACAGAACGTCCACCAGTGG 24327 28 100.0 32 ............................ GGTGGAAATCTGGGTGGTCTATGCGGAGAGCG 24267 28 100.0 32 ............................ ACGATGACGACTTTGACGAGCTGCCGGGCGCG 24207 28 100.0 33 ............................ ACATTCGGCGCCCATGCTCGCCCCACGCGGAAA 24146 28 100.0 32 ............................ GCGAACACGATGCCGACCAATACCAGCAGCGG 24086 28 100.0 32 ............................ TCGGCCACGACCATGATCCCATGCTGCGCCGC 24026 28 100.0 33 ............................ AGCTCCGGGTTGTACAGCGACTTGAGCATGTCC 23965 28 100.0 32 ............................ TGCAGCACCGGATCGGCGCGGACCCCGTAGAC 23905 28 100.0 32 ............................ CCAAGGGCGAGGCGGCGCGGAAGGGGGAGGAA 23845 28 100.0 32 ............................ ATTCGGCCGCCAGTGCGCGCAGCCGTCGCTTA 23785 28 96.4 32 ....................A....... GGCGAGGCGAACTTGCAACGCGCCGAACTCGC 23725 28 100.0 32 ............................ ACGCCCGGATGCCCAAGGCCCGGATGCCCAAC 23665 28 100.0 32 ............................ GACTCGAGCCGCACGCAGAAGCGCGGGCCGTA 23605 28 100.0 32 ............................ TACCTGACGGGCCAGCGCCCCTCGGACGTGCT 23545 28 100.0 32 ............................ TCCTCGATCCTCTTGACCGTAAACAGCGGCGC 23485 28 100.0 32 ............................ CCTCGGGGAAGCCGTCACCATCACCAAGTACG 23425 28 100.0 32 ............................ TTCGTACACGTAGGTGGGAATCCACACCGAAA 23365 28 100.0 33 ............................ ACACCGAACAAGTGCTGCGGCGCATGGCACACG 23304 28 100.0 33 ............................ AGGCGGCGGCTGCTGCTGCGCGTGAGCGACTGG 23243 28 100.0 32 ............................ TACGAATCCCCGCCAGTGCCTTTCGCAGTCGA 23183 28 100.0 32 ............................ TGCGCGGCCAGCCGCGCGTTGTCGCGGTCAAA 23123 28 100.0 32 ............................ AGTTTCAGAAGCTGCGCACGTCGCCAAGCGTC 23063 28 100.0 32 ............................ ATCGCGCGGCGGTAGATCACAACGTCGATGTC 23003 28 100.0 33 ............................ AGAAGACGTGGAGTGCGGTGTGTACGCGATGCC 22942 28 100.0 32 ............................ TGTACGTCGTATTATCTGCTGGCTCCGGAGGA 22882 28 100.0 33 ............................ GGCGCGCACTGGCGCAGCCACTCCATGACATCC 22821 28 100.0 33 ............................ AACAGCTAGCCGCCATGCAAGGCGGGGAGAAGC 22760 28 100.0 32 ............................ CGGTTCCCGTTCTAGGCGAAGAAGAATGGACC 22700 28 100.0 32 ............................ AGCGTCCGTCCACCGTCGCCCTGCCGGCTCCA 22640 28 100.0 32 ............................ TGTGCGCGTTGAACCGGATGCCGCGCGAGAGC 22580 28 100.0 32 ............................ AGCGCGCGACGGGCACGGCCCAGCTGTTCCCG 22520 28 100.0 32 ............................ TGCGCACGGTGGGCGGCGGGAGTCCGCTGCTG 22460 27 96.4 32 .............-.............. ACCAGTACATGCGCTGGCGCAAGGACGCCCCC 22401 28 100.0 33 ............................ CCGCAGCCGCCGGCGCGCGCTCGACAGCGGCAG 22340 28 100.0 32 ............................ GAGACTCTCCCCCGACGCCGGGGCGTCACAAC 22280 28 100.0 32 ............................ CTGACCGAAATGGCTATCGGGGACGGCAATGG 22220 28 100.0 32 ............................ ATTTTGGTGCAACCCACGCAAGCATCGAGCGT 22160 28 100.0 32 ............................ CCACAGCCCGCCCAGCATTGGCCGCTGCATCC 22100 28 100.0 32 ............................ ACGAGCCGGGCGAACACCCGGACGGGTGGGAC 22040 28 100.0 32 ............................ TCGCCCAGGCCGCCGAGCGCTCAGGCTGTTCC 21980 28 100.0 32 ............................ ACCCTGAGCGGCATGGTTATCGCGACTGTGCC 21920 28 100.0 32 ............................ ATGTCCTCCAGCGCCTCGCGGGCACGTTCAAC 21860 28 100.0 32 ............................ GACCCGGAGGGAACGACCATGAGCATGAACGA 21800 28 100.0 32 ............................ ATCGGGTAGACCCAGGCGCGCGTGACGCCCGG 21740 28 100.0 32 ............................ AGCAACACCAAGGCCCGGATGCCCAAGGCCCG 21680 28 100.0 32 ............................ GTCAGCCACGGAGGTTCGCCTCCATCGCTTCG 21620 28 100.0 32 ............................ AACGCGACGAAGACCGCGACCGTCCGTCCGAT 21560 28 100.0 33 ............................ AACCGGCAGTGCCTTGCGCTGCGTGCTCGCTGT 21499 28 100.0 32 ............................ ACTCCCGAAAAGCTCGTCGACGCAATACTTGC 21439 28 100.0 32 ............................ TACGCCAAGGCCATCGAAGGCTATCGGGCGTT 21379 28 100.0 32 ............................ TCCGTGTGGAGTCATAGATGGTCAGTCGTCAT 21319 28 96.4 32 .....T...................... GCGAACGGGTTGCGAATCGGTCGGATGAAGAT 21259 28 100.0 32 ............................ GAAACCCGCGAGGCGCTGAACCGCGCATTCCG 21199 28 100.0 32 ............................ TGACCGCCACCCGCCGGCGGTGAGTAGTCGGC 21139 28 100.0 32 ............................ GGACGGCAAGCGGGTGGGCCGCGAATGGGTCG 21079 28 100.0 32 ............................ CGTCGCCCAGCAGCGCGTCCCCACGATCCAGC 21019 28 100.0 32 ............................ TATCGCAAAGCCCAGTACAGGGCAGCACAGGG 20959 28 100.0 32 ............................ GGATCGCGGTTCTCGCCATTGCGCACGTCGCT 20899 28 100.0 32 ............................ GCGCGCGATTACCAGGCCCGCGAATTCCGGGT 20839 28 100.0 32 ............................ CCTCTGCCGGCTCGGTGGGCACCGCAATCTGC 20779 28 100.0 32 ............................ TTCCCGTGCGGCGAAGGCGGCTGCGATCATTA 20719 28 100.0 32 ............................ ATGAGTGAGGTGAAGCCGGTGACGGTTGAACG 20659 28 100.0 32 ............................ AGCTGATCGAGGCCGACAGGTGGTACGACGCC 20599 28 100.0 32 ............................ TGTTGATGTTCGCCATGTACGTAGCAGCGATG 20539 28 100.0 32 ............................ ATCGCCGACGTGACGGGGCTGCAAAGCGCGCT 20479 28 100.0 32 ............................ ATCCTCGCCCAGCTTCGCGGCGAGCACGCGCG 20419 28 100.0 33 ............................ GACCATCGTCAACAGAGCGAGCGGAGAAATGGT 20358 28 100.0 32 ............................ CATCCAAGTCGGCGCCGGATTGCTCCACGTCC 20298 28 100.0 32 ............................ AAGCCCAGCACAGGGCAGCACAGCACAGCACA 20238 28 96.4 34 ..............C............. CGGATGGCGCAAATCCGCGCTGTACAAGGGACGC 20176 28 100.0 32 ............................ TTGCGGCCTTCCTGCACCTGCAGGATCAGCCG 20116 28 100.0 32 ............................ GGCATCATCGCGCGCACCGACAACGACATCGG 20056 28 100.0 32 ............................ GCGACGAAGATGGCTGCTGCTGGTAGGACCAG 19996 28 100.0 32 ............................ ATTCCGCGGCGCGCACTTCGCCACGTTCCCGC 19936 28 100.0 32 ............................ TTTGCGGGATCGAACCCGTTTCGAGCACTTGC 19876 28 100.0 32 ............................ GAGTTGACTGACGACGAGTACGAAGCGCTGCG 19816 28 100.0 32 ............................ TCGGAGCATCCCACGAGTAGCCGCAGGAACGC 19756 28 100.0 32 ............................ CCTATGAGGACATGGACGCCATCGATGACATG 19696 28 100.0 32 ............................ TTGCCGAGTCGTGGGAAGGCGGCATCGACATC 19636 28 100.0 32 ............................ AGTGGAACACGTCGATGATGGACGTGCCGAAC 19576 28 100.0 32 ............................ AGCGGTTCCGTGAGAATGGACACAGGGATATC 19516 28 100.0 33 ............................ CTGACGGCGGAACTCCGGACCGAACCGATCGAA 19455 28 100.0 32 ............................ TGCGTGCTTGACAGGTACTTGCTGGCCTGCCC 19395 28 100.0 32 ............................ ATGCCGACCACAGCACAGCGCGCAGCACAACG 19335 28 100.0 32 ............................ GTTGGTCCCGAACGCCGACGGCGCGTAGAAGA 19275 28 100.0 32 ............................ AGTTTGCCGGCCGCATCCAGCGCAACGATTTT 19215 28 100.0 32 ............................ CCGGAGGGCAGCTCGGTCACCTCGCCACTGAC 19155 28 100.0 33 ............................ CGTGCGTTGATGGTGTAGCTGTGCCGGTACGCA 19094 28 100.0 32 ............................ GGCACGCCCGTTTGGGCCGGGCTCGTAGAAGG 19034 28 100.0 32 ............................ GTCGTCAGCCCGCCACCACGCGAGCGGTTCGA 18974 28 100.0 32 ............................ GTGAGTGAGGTGAAGCCGGTGGCGTGGGTCCG 18914 28 100.0 33 ............................ TCGGCAAAGAAGCTGCGCGAGTGCGCCAGGCGC 18853 28 96.4 29 ...........................T CAGGCCAGCACGGGGACGTGAGTCCATAT 18796 28 96.4 0 ......................T..... | ========== ====== ====== ====== ============================ ================================== ================== 101 28 99.8 32 GTTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : CCGTCCTCGAACGCCTGATGGCGGAGAACTGGCTCAAGGGTGCGCGCGATCACGTGCGAGCGGGCACCATCGCGCACGTTCCTGCGGTTGCAACGCATCGAACAGTTCAGCGCCGCCAGTTCAAGACCAATGTCGAGCGCCTGCGCCGGCGGCGTATGCGCCGCAAAGGGGAGTCCGCCGAACAGGCTGCGCAGGCTATCCCCGCCTCAGTGGAGCGCCGTCCGAATCTGCCTTACGTCTGGATCCGAAGTCGCAGCAGTGGGCAGCCGTTCTGCCTGTTCATCGGCATGGGGCCGCTCCAGTCGGAGCCAGTGCCTGGCACGTACAACAGCTACGGACTCAGTGGCACGACCACCATCCCTTGGTTCTGACCTTTTTTGCCCAGGCGTCCGCTTGGTCTTTGAAATCAACGGCTTACACCCTGATCGCAGAGAAGGGTCTTGCTCGATAGTTCGGCGCGCCGCCAAGCCACATCAATGGCTTGGCGGCTTTTTGCTCTA # Right flank : AGCGGCGGCGCGTAAGGAGGACGCGATCGAACGCTCCCACGACGCGGCCCCGTGAGCTGGCCATACGCGTGATGAGGGAGGCGCCGTCTCAGGTTATGAGAAGACAATGCCGCAGAGTGTCAACGACTCAGCAAAGCACTGGAAAGAGCGTCATGGCTTCCACAGCAACCTCGATTGATAGTTCTCTTGACGCGGCATTGCGCTACGCCTCGGCGATTGGCGTATTGCTCGTGATGCTCGTTCCCGCCGCGCGCGGCATGCACGCGGCGCTGGGCTGGCTGCCGTTGTGGCTGGTGGCGATGCCGGGCGTGGCGTGGTGGGCGTTGCGCGGGTTTCCGCTGCCGGCGTGGCGCGGTCGCGCGGAGACTCCGGCCCGGCTCGTCGCCCCTGCGCCGCGGCGCCTGCGCCAGGCCCGGCGCGTGGCGCGGCCGCGCCGTCGCAGCGGCATGCAGCCGCGCGCAGCTTGAGCCCATCGGCGCGGCGGCGGCGTGCGCGAGCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //