Array 1 273691-269822 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWT01000001.1 Acinetobacter ursingii strain TUM15517 sequence001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 273690 28 100.0 32 ............................ TGGAGTGAAATTGTCTCAGGTGGAATATGACG 273630 28 100.0 32 ............................ ACAAAAATGGTTTTTAGTTATCAATGATTTGC 273570 28 100.0 32 ............................ AAATACAAAGTTAAAGTTGAAACAGTCACAAA 273510 28 100.0 32 ............................ GCATTGTCTTTGATCTTTAGGGTATCAACCGC 273450 28 100.0 32 ............................ TTATGATTCACAGACTTGGACAATCAAAAAGA 273390 28 100.0 32 ............................ GCTATGTGTGCCGATGGCTACACGCGGAATAC 273330 28 100.0 32 ............................ GATTAAGATCACCAACAAAGGGGCGATTCAAG 273270 28 100.0 32 ............................ TCAATGGCTTCAATTGTTTTGGATTTCGATTG 273210 28 100.0 32 ............................ TATCGCAAAATCACCACCCAAAGTTACTTTTC 273150 28 100.0 32 ............................ TTGTTTCGCAGTTAAAGCTTTAGTCGAATCAT 273090 28 100.0 32 ............................ ACTGATGTTTTTGCCCGCATAAAATACGTGAT 273030 28 100.0 32 ............................ CCCCATTCGGATACTCAGAAGTTTGGGGAGTA 272970 28 100.0 32 ............................ AGCATCAATCAGATCAGCAGCAAGGTTTAAAA 272910 28 100.0 32 ............................ AGTTGGAAGAAAAAGCGGTTAAGGCTGCATAG 272850 28 100.0 32 ............................ TTGTTTCTTAGGCAACGGACGAACGTCATAGA 272790 28 100.0 32 ............................ CTCAACGTGTTTCGTATAACAAAAAAGAAGTT 272730 28 100.0 32 ............................ TCCAGTAGCACAGCAAGTTGATCAAAAAGACT 272670 28 100.0 32 ............................ TGGCGTGATTTTGATTCAATCAACTACTGATA 272610 28 100.0 32 ............................ AGTACCATCTGGGTTGCCATTTTTCGCAATTA 272550 28 100.0 32 ............................ CATAAGCGAAGCTTGAAAAGCGTCTTTTGCTT 272490 28 100.0 32 ............................ TGAACCATTAGAACTTGTTGATGTGCTAGTGC 272430 28 100.0 32 ............................ AATCAAACGGATTATCAGTAGTTGATTGAATC 272370 28 100.0 32 ............................ TGGTGCAGCGTGGATATGAATAGTGTATGTAT 272310 28 100.0 32 ............................ ATGAAGCGTTAATGATCGACCAATGTCCAAAA 272250 28 100.0 33 ............................ ATTTCAATGTGAAAAAGGACAAGCTCAGTCTCA 272189 28 100.0 32 ............................ ATAGGAATTTCACAGTACAAGGCAACATGGTC 272129 28 100.0 32 ............................ ACTAAAAAGGTGGATACTTGGTTGATGGATAA 272069 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 272009 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 271949 28 100.0 32 ............................ GTCAGTAGTAAGCGTACCCACAACGCCTGAAA 271889 28 100.0 32 ............................ TGTTCCAATCGTGGCCACTTTTCCAGAATCAT 271829 28 100.0 32 ............................ AGAATAGACCAATAGCAGAAGCACCAGTAATA 271769 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTTGACCAAAA 271709 28 100.0 32 ............................ AGATGACGGCTGTACTCGCACTCAAAACGGTT 271649 28 100.0 32 ............................ GATTTTAAATTCGGCTTCGGGCGATAACATGA 271589 28 100.0 32 ............................ AGCTAATCATCGGGGGCAATCCAGCTTATGAA 271529 28 100.0 32 ............................ TGTGCAATTATTTTGAACGTTGGGAGTGTCGT 271469 28 100.0 32 ............................ ACGTATGGATGCTTTGGAGCAGGAATTAGTCA 271409 28 100.0 32 ............................ ATGACGTAAGAAATCATGTTATCGCCCGAAGC 271349 28 100.0 32 ............................ TGTACCAGAACCGTCACCATCGCCACTTCCTG 271289 28 100.0 32 ............................ ATCGCCACTTCCTGAACCATTTCCACCTGTAC 271229 28 100.0 32 ............................ TCCAGTACGTCAGATTTATGCAGATATTAACG 271169 28 100.0 32 ............................ TTTAAGAATAGATGTGCAGAGTTTTGACTCAT 271109 28 100.0 32 ............................ TGACCTGCTTTCCATCGATGACAGCATTTTCA 271049 28 100.0 32 ............................ TGTGTGCTTATGTGGCATAGTATCAAGCACAC 270989 28 100.0 32 ............................ GCGAAAAGGTTGATCTGGAAATGCGTAAAGCA 270929 28 100.0 32 ............................ AATAACAGCAGTTAAAATAGCGACAATACCTT 270869 28 100.0 32 ............................ GTTAATGCGCTTCCAGTCGCCTAGTTTATTTA 270809 28 100.0 32 ............................ TTTTTATAATATAGGGGTAGCGGATACGCAAC 270749 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 270689 28 100.0 32 ............................ GCCCGCTTTAGCTAACTTGACAGCAACAGGCA 270629 28 100.0 32 ............................ TAAAGCAACTTCTGAATATATGTATACAAATT 270569 28 100.0 32 ............................ TACGTGCGTAGGTGGTGATGTCTGGCGAATAT 270509 28 100.0 32 ............................ TGCTTGGGTCAGGGCAATTGCATTGAAGATGC 270449 28 100.0 32 ............................ AAATGAAATCATTAGATAATTATACAATTTAA 270389 28 96.4 32 ..........G................. AAGCAGCTATTTTTTCTCGGTCAAAGTGGAAT 270329 28 96.4 32 ..........G................. TGTAATGGCTCAGAATCATTAATCTTATATCT 270269 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 270209 28 100.0 32 ............................ GTTACTGGTGATGAATCTAGTCAAGTTGATAT 270149 28 96.4 32 ..........G................. AGAAGAATGGAACACCAGACTTATCACTTGCA 270089 28 96.4 32 ..........G................. AATAGTCTTGCTGAAAAGTTAAAGGCTGCTTT 270029 28 96.4 32 ..........G................. ATCTAATGGTGGCTGTATGAAGCAATACTTAC 269969 28 96.4 32 ..........G................. GAGAGGACAAAAAATTATTCACGCTGATTGAG 269909 28 96.4 32 ..........G................. ACTCTAAATAATTTTCTGGATTTTGCCCGAAT 269849 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 65 28 99.6 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TAGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACAATTGAACAGCGTATTGTTCATCAGGCAGAACGCCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACGGAGACTTTTGAACCTTATATTAATATGAAAAGCCACACCAATGATATGAACTTCCGTTTGATTATTGGGAAAAAATGTATTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCCACAGTACCCGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : TGCAAACGACGAATAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAAATGATCGTAAAAATGAGTTAAAAAGGAATGATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAGTCAAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGTACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTATTTTATCAGCTTCTAATACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4480-5165 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWT01000004.1 Acinetobacter ursingii strain TUM15517 sequence004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 4480 26 100.0 34 .......................... TCAGGCATTGCACGTTCTACCCATAGTTGAGGGT 4540 26 100.0 34 .......................... TATAGCGCGAGTGAGTTTGAAATTGTTCCACAGT 4600 26 100.0 34 .......................... CAAGACAGTTTTCGCTTCTGGGGTTCGCGTACGT 4660 26 100.0 34 .......................... AACAGGAAAGGGGCGTACTTTAGTTATTGGTAGT 4720 26 100.0 34 .......................... GTATCGACTTATGCAGTTGAAAATCCTAATTCGT 4780 26 100.0 34 .......................... GTAGTAATATACAACCAAACCAATTTTGGATTGT 4840 26 100.0 34 .......................... AAAACGTGCCGTCGCTTTCAATGTGTGTCGTGGT 4900 26 100.0 34 .......................... TGTTAAAAATATCTATAGAATAATTCGATCAAGT 4960 26 100.0 34 .......................... AGCAGGAATTTCTTTTTTAAACGACTTAAATAGT 5020 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 5080 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 5140 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 12 26 97.8 34 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCGCTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAGAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTTAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATGATTTAACTTATTTTTAAAGCATAATATCAAATTATTAAAATAACTTGTTGTTATTAAATGATTTATTAATAAGAGTTTATAGT # Right flank : TCGAGAATCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGTCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGGGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGTACTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //