Array 1 20-767 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYE01000023.1 Shewanella indica strain KCTC 23171 sequence23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 20 28 100.0 32 ............................ TTGCCATTTCTGGCTCAATGGATGGTGTTTAT 80 28 100.0 32 ............................ ACCACGCCACGCATTAAACAACTGAGCCGCTT 140 28 100.0 32 ............................ ATTAGTTTAACACCTTCCCGATTGCACTATAG 200 28 100.0 32 ............................ TGACTGGCTCACCGTATCGAGGGATACAGTCA 260 28 100.0 32 ............................ GTTGTATTCAAACTCTCGCACTCCAACTATAA 320 28 100.0 32 ............................ GATATTTCACACCAAGGACGACCTGAGTCAGT 380 28 100.0 32 ............................ TTGCCATTTCTGGCTCAATGGATGGTGTTTAT 440 28 100.0 32 ............................ GCCTGTTGGGTCGAAAATGGTCATGTACAGAA 500 28 100.0 32 ............................ TGTTATCAACATGGCCTGTGCCGTGTTGGCCC 560 28 100.0 32 ............................ ATCTTGAACTCACCAGCATCAGACAGCGGAGC 620 28 100.0 32 ............................ TGCTGGACGGCGAAGTCTCGGCGCTCACCATC 680 28 100.0 32 ............................ ATACGGATATCGTGGGCTCAATCCGCAAGATC 740 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : AAGGACGACCTGAGTCAGTG # Right flank : AGTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTGTGGGGCTGAAGAGGTCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAGCTAACCGCGACTCTTTGGCTGCAGGCGACCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1684-4891 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYE01000051.1 Shewanella indica strain KCTC 23171 sequence51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1684 28 100.0 32 ............................ TGTAAGCGCGTCAACAAGGTTGCGGCGTTCAG 1744 28 100.0 32 ............................ GCTTTCTGGCAGAACTACAGGCTCAGAAGTGT 1804 28 100.0 32 ............................ ATTTCAAGAGGGCAGTCGCCTCGGTAGCTTGA 1864 28 100.0 32 ............................ TTGTCGCTGGCTGAGTGCCAGGTACTTAATTT 1924 28 100.0 32 ............................ ATCATTAAGAATGCTTTTGCCGTTCTCAAGAG 1984 28 100.0 32 ............................ TGGCTGTAGCTCAGGAGCGTCTGTCAGGGTTA 2044 28 100.0 32 ............................ AATCACCAGCCATCCGATAAACTTCTCCTTGG 2104 28 100.0 32 ............................ TTATAGGCGGCGCTATACTTGCGAAGGTGAAG 2164 28 100.0 32 ............................ ATTGTTTGAACGTTCTTAGCTAGCAAGATGTT 2224 28 100.0 32 ............................ TCGGCGCGCTTTTGTGTGTGCTCCATTGTTTG 2284 28 100.0 32 ............................ GGATGCAGCAGTTTGCGACTTAACACGCTTGC 2344 28 100.0 32 ............................ TGTTTGACGCATCAAAAACAGGCAATCTTGAA 2404 28 100.0 32 ............................ TACTGAAGGATATTGTCTCGATTATACCGCTC 2464 28 100.0 32 ............................ AGCACCCTAATCTTGCGAAGGCTGGCCTCAAC 2524 28 100.0 32 ............................ ATAATTTCAGGCCTGAATCCACTCACTTTTTA 2584 28 100.0 32 ............................ ATCCTTACGCACTTCGTTTGGCTCTGCATCAT 2644 28 100.0 32 ............................ AAACTCTGGCAGTAGAAACTTACTCGCTGTAA 2704 28 100.0 32 ............................ TTGATGCGCTTAAACCCCTTGCCAGTTCTGAC 2764 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTATAC 2824 28 100.0 32 ............................ TCTTGTCTTGATGGTTCGCTCGATTGTTTCTT 2884 28 100.0 32 ............................ GACCTGACGAATTCAGGCTGAACTCCGTTAGC 2944 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTATAC 3004 28 100.0 32 ............................ ATCGGCGCGCATAGCCTCAATCTCACGCCACT 3064 28 100.0 32 ............................ TGCGAGATGCCACAGAGAGAGCTGTCAATGGT 3124 28 100.0 32 ............................ TGTCTGAACCAGCTAGCTCTGTTTCGTCCCAG 3184 28 100.0 32 ............................ TATTAAATCACCATCTTAAAATGCCCCAGTCT 3244 28 100.0 32 ............................ ATGCCAGAGGTCTGGAAAACTTCTTTACCATC 3304 28 100.0 32 ............................ TCTCGCGTATTTAACGATATGCGCGGACTAAG 3364 28 100.0 32 ............................ ATCAACCTATTACCTTATCTATTGCACTGTAG 3424 28 100.0 32 ............................ TGAAAGCCAGCGATTTGATTTAACGATTGATG 3484 28 100.0 32 ............................ TCAGACTGCGCTTTACCCGCGCATTCGCGACC 3544 28 100.0 32 ............................ ACAAATGACTTGCAAAATTCATACACATCTGA 3604 28 100.0 32 ............................ ATTAGCAACGGTAACTGAAACCGGATCAACTG 3664 28 100.0 32 ............................ TTGGTTGCCACTCATACTGGTAGAGCCGTTTT 3724 28 100.0 32 ............................ AAAAGTAAACGAAATTGTTATTGAGGACGGAG 3784 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTTATA 3844 28 100.0 32 ............................ CTCTTCTAGCGCAACAGGGAACCCGGTAAACC 3904 28 100.0 32 ............................ ACATGGTTGCGTAGCCTTTGGCAGTCATCATA 3964 28 100.0 32 ............................ CACAGGGAAGCCGCCCACAACAGCGTCAACAT 4024 28 100.0 32 ............................ GACGAAGAAAAGAAAGCCAAGGACAAGAAAGA 4084 28 100.0 32 ............................ AGAATATGCAGGAGTATTTGACATGCCGTTGT 4144 28 100.0 32 ............................ GCTATTATCTGCGGGAGAGCCGACAAAGAAGG 4204 28 100.0 32 ............................ TCCTCGTCACGTTCAAACGTGATGATCTTCAT 4264 28 100.0 32 ............................ GATTGGCATCACAGTTCCCGGTAATACGCCTT 4324 28 100.0 32 ............................ ACTTCCGCCACATAAACCTTCCCATCATACTC 4384 28 100.0 32 ............................ TCATAGCTGCATAGTATGACCTGGCTGGCAGT 4444 28 100.0 32 ............................ TTTCGTGGTGCCAGACGCAGTACTCTATTGCT 4504 28 100.0 32 ............................ CTATCTTTCCAGAGTCAAGACGGAATCACCTC 4564 28 100.0 32 ............................ ACGTATTGCAACAGGAAATCGGCTTTCTGCTG 4624 28 100.0 32 ............................ AAATTCGTCCTTGTTTTGCGGGTCAAGGATTT 4684 28 100.0 32 ............................ TGTATATCCCTGTGAAGCTCGACAATAGACCT 4744 28 100.0 32 ............................ TATCTCGGGAAGTTTAATACCACCATGATTAC 4804 28 100.0 32 ............................ ATTAGTTTAACACCTTCCCGATTGCACTATAG 4864 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 54 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTCAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTAGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : TGACTGGCTCACCGTATCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //