Array 1 304664-302560 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNHT01000001.1 Actinomyces sp. UMB0918 ERR1203595.17957_1_7.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 304663 29 100.0 32 ............................. TGCGATTCGTAAATAGGAATCGGGCGCGGCAC 304602 29 100.0 32 ............................. AATGCAAACCTGGCCAATACCAACCCAAACCG 304541 29 96.6 32 ............................T TCACAAAAGGGGAATGATGTCGGAACAGTATT 304480 29 100.0 32 ............................. ACTGGAGATTACCCCCGGCGACTATGAGATTG 304419 29 100.0 32 ............................. TACTTTCAAATCTCAAGCCTATACATCACATG 304358 29 100.0 32 ............................. CATGCTGCCCCAATACCGACCACAGGCACCCA 304297 29 100.0 32 ............................. AAAAATAATATTATAAAAAAGAAGGGGTTGAA 304236 29 100.0 32 ............................. ATTTTATTATGGGATACGCGTATAACACTAAA 304175 29 100.0 32 ............................. TATCGCGCAGATTATTGCCGCCCTTTTAGGCT 304114 29 100.0 32 ............................. ACTCGAATACGAAGTCATTGATGAGGCCGCGT 304053 29 100.0 32 ............................. AGGCAAGAACAGGCAACCCAAATAGGTTCACT 303992 29 100.0 32 ............................. GAAACGCTACCCCATCGTTGACAGTCTCGGCC 303931 29 100.0 32 ............................. GAAACGCTACCCCATCGTTGACAGTCTCGGCC 303870 29 100.0 32 ............................. AATGTGAGGGTGGCACAATCCCCGCCCCCGTG 303809 29 100.0 32 ............................. CCCCTTCCGCCGATACGCAGAAGCACGCTATG 303748 29 100.0 32 ............................. GGGGTCGACATTCCCGGCCGCAAGGCGAGGCC 303687 29 100.0 32 ............................. TTCCGTGGCATAGATGGAGTGATGAATGCCTT 303626 29 96.6 32 ............................T ATCGCCGACTTGGACGAGGGTACTGCGTTGAG 303565 29 100.0 32 ............................. CGGGTGCAGGCGGGCGAAAAAATAGTTGTGGA 303504 29 96.6 32 ............................T GGTAAATGCCTTGGATGCTTAAAAAGTTTATG 303443 29 100.0 32 ............................. GCTGCCTCGCAACGGTTGAGCAGCTGCTCGAG 303382 29 96.6 32 ............................T GTTGCTAATTCCAGGCCCTGTACAGGCAGGAA 303321 29 100.0 33 ............................. GCACATTCACGCACATTCGGCTTTCGGGCTTTT 303259 29 96.6 32 ............................T GTTTATTTCTATGCCGTTTTGCTCATACCAGT 303198 29 100.0 32 ............................. CTCCATGCCACGCTACCCGCAGCTAGGATTTG 303137 29 100.0 32 ............................. AACTACAACAACGGCACCCCGCCTTTGGCCCA 303076 29 100.0 32 ............................. ACAACAACACCAACAGCAACGACGCAACCGAG 303015 29 100.0 32 ............................. TATTAATTTGCTGCCCTGCCTCATTAGCGTTT 302954 29 100.0 32 ............................. GGTTATGAAATACCAAATATCGAGTTTCAATA 302893 29 100.0 32 ............................. CCAGCAAGCGGGAGGGGGGCATTTATGGGCAG 302832 29 96.6 32 ......................G...... CCAGCCCCTCAACCCCTCCTGGTAATCAAGGA 302771 29 100.0 32 ............................. CAAACCCTCATCCTCTCATTCAGCAGAGGCAA 302710 29 100.0 32 ............................. TTCCGCCCAAACTTCTCTACCGTGCAAGTAAT 302649 29 100.0 32 ............................. GCTTCTTCGCGCCAATCACGCCGCGCCCCTTC 302588 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.4 32 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : GGTGAGGGCGCCTCCGGCAGCAAGGACGGTTCCACCGGTACTGACGAGGGCGACAACACTAGCGATCCCGGCGCGCAACCCGGCACCGAGCCTGGAACGCAGCCTGGGGCAAAGCCTGGAAGCCAACCCGGTGCAAAGCCTAGTTCGCAACCAGGTGCTCAGCCCAGCGGCGAAGGCAAAAACGCTGGGGGCAAAAACGGCGGCAAGTCTGATGCGGAACGGCAAGCGAGTGAGCCAAAAACAGTCGGCTCGTTCATAGCGACAACTGGAGCGACAGCTTTAGTACCCACTCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGGGGCTGAGTTGGAGAACTCAGATGGTGCGTTACTAGGCATAGATACGCACCTTGCAGGCGGCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATACAGACGCCCAAAAGCGCAGGTCATTTAGA # Right flank : TGAGCTCAGAGCAGTCTCGCCAGCAGGTCCTTCTATTCCCCGTGAGAATGGAACAGGGAGAAATTCGATAAATGTTACTCGACCACTGTCGAGTGGCGTGTCACGTGCAGCTCAGATACGTGTAGGAATAATCGTTTAATATGTCATAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGCGGCCATTCTTATCTACACCTAACCCTATTGGTTTCAGGCTATTTAAGGACGCTCCCTGCCGTAAGTAGCATGCCCCGTGATTGATTAACGTAGGGGACGCGTCAGCAATCATTCCCGAGTCTTTTAGGCGTTAGAGCTGCAGTTTTTCCTTCACACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTAAAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGCCCTAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //