Array 1 217166-217414 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJGB01000019.1 Aeromonas veronii strain A29 A29_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 217166 33 100.0 39 ................................. AAGACCAACCCCACGCTGTCTATTCCTATACTAACATAG 217238 33 100.0 39 ................................. AAGACTCCAGCAAAGCTGTTGAGTAACACGCCCACACAG 217310 33 90.9 39 .....GT.....C.................... AAGACGCAAGTTCGATGAAATCATTTTCTACTGACATAG 217382 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ======================================= ================== 4 33 97.7 39 GTCCTACTGGACTACGCCCTGACTAAAGGGATT # Left flank : ACCGAACTGGCGGCCACCTCATCGCCCTGCAGCTCGGCGATAAATTGCCCGACCCCATCCCCCAGCTCGGCAATAGGGCGTCCCTGCATCGACCCGGAGGTGTCGAGCAGCAACATACAGGGGCAACGCGGGGCGGGGTTGGTGAGCAGACTCTGCTCGAGATGGGCAAGTTCCATCATCTTCTCTCCTGTGACAAAGCCGGATTGGCTGACGGAAGAGATAATGACAGCGTTCAAAGGGAAACGGATTGACACCAACTGGTAAGAAAATGAGCTACCTGACACATGCAATGCGAAGCTGTCAATGCAAAACATTCTTAGATAATATTCCCCTACTTTAAAAAATAGGTGAATTTAAATATCCTATTAAATTAATACGTTAATAACGCATATCATAATCCTGGTCTGAAATATGCTTAAATGGCGTTTTTTTATCCCCAGACCTATTCACTGCAGTGGATAAGTTGCATCAATAAAAACAATGAGTTATAAATTGCTTTA # Right flank : TGGCTGATTGGCAAAAGCAAAACGCCCCACCCGGTGATCACCGGGTGGGGCGTTTTGCTATTCAGCGGCTATTTAGCGTGGGGCGGGCTGGCCACCTTGGCCTGCGCCGGCCACAGTTCATCGCTGAGATGGCCCTGATGGATGCTCCAACCATACTGTCGCAACCGGGTCGCCAGCTCGCTCAGGGGCACCCGCCCGGCGGGTTGGGTCACACCTACACCGAAGGTCTGTATAAAGATGGTTTTGAGCTGGTAAGAGAGATGGCTCCACCAGTTATACCAGGGACCCAGCGGCACCGCCCCCTGACTGCCGGGCCGGATCGACTGGCCATAGGGGAAATGGCCCTGACGGATATTGTCGGCCACCCGACTGCCCCCCACATGTTCGAAGGGGTGACGCCCACTCATCAGCACCATAAACACCAGCACGGTGAGCGAGAAAGTGTCGCTCTCTGGTGTACGCTGCACCGAGGCGAGATCCTGACCCTGATGTTCCGGGGG # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTACTGGACTACGCCCTGACTAAAGGGATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 232378-233061 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJGB01000019.1 Aeromonas veronii strain A29 A29_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ================================== ================== 232378 38 100.0 34 ...................................... TAATCTCGGAGCTGGCGTACGGTACGAGGCTTAC 232450 38 100.0 34 ...................................... GTGTCGGGTAGACTTCGTGGTCCCAGTTCAGCAG 232522 38 100.0 34 ...................................... GATCAGCGCCTCACCAGTCACTGGATCTTTCTTG 232594 38 100.0 34 ...................................... TGGGCACACTGGCATCTATGCCGATGGGTGGTGG 232666 38 100.0 34 ...................................... ACCAGTGCCTTTGCGCAGTTGTTTAACGTACTTC 232738 38 100.0 34 ...................................... CGAACTTCGTGCGCCGAGTAGTCCACCTTGATAA 232810 38 100.0 34 ...................................... TCATGCCGGACATCACCATCATTTGCATCATTTG 232882 38 94.7 34 C.................................C... GCCATGGTGCTGAGCGCTTCAGCGCAGAACAGCT 232954 38 94.7 33 .......C......C....................... CGTTCTTCAAGTACCCCAATCGCACGAAGTTGT 233025 37 86.8 0 .......C......C................-.G...T | ========== ====== ====== ====== ====================================== ================================== ================== 10 38 97.6 34 GTCCTGTTGGACCATGCCCTGACTAAAGGGATTAAGAC # Left flank : GATCGGCTATGACATCAGTTGTCCACGGCGACTGCGCCGGATGCAACGCCGCTGTGCCGAGGCCGGCTGGCCACTGCAAAAATCCCTCTATCTGCTGCCGCTGACTTCTGCAGAACGCCTCGCCCTCTGTGATGAGCTGAAGGGGCTGATCGAGCCGGAGCAGGATCGCCTGCTCTGCCTGCCCTTTTCCGTCGTCGAAGGAAGCTTTCATCTGGGCCCTCGTGGTCCGGTACTGCTCTTTCACGACGATCCCCGGCTGGCGGATTATGTATTTTGACACTCACAAATCCCTCGCCATTGCAAGATAAAAATACGAGAGGCCTGCAGTGAGGCCTCATAAAAATGGTGGTAAATATAACTTTTTTAAAAACAGTTGGTTGAAAAACATCATAAACCAATGGGCATAAAAAATGCTTAAAATGGCATTTTTTCATCCACAACCCTGTCCACACCAGTGGATAAGTTGCATCAATAAAAACAATGAGTTATAAATGGCTTCA # Right flank : TAAATGCCCCCGGGCTGGCCAATTGGCCAGCCCGTTTTTTTTACTCGCCACCGCTATCCTCTTTCCTGTGCTTATCACAGAGGAAGCGACCATGCTCCATACTCCCCAAGCCCAACTGCAACAGCGTCTCATAGCCCTGCAGCAGACCTTGCAGGCCACCCCGGCTGGCATGCCGCTGGTCCGGACACTCGCCAGCTGGCTGACCCGGCTACACGACCAGCCCGCCACCTTGCTGCTGCTTGGCAACCACAACGCAGGCAAAAGCACCCTGGTCAATGTGCTTAGCGGCGAGGCGCTGGCACCGACCGGCGATATCCCGCTGACCGACCGGGTGACCGACTACCCCTGGCAGGGGCTCTGCCTGCGCGATACCCCGGGGCTGAACGCCCCCATTCCCCATCAGACGGTCACCGAGGCGGCGCTGGCCAGCGCCGATCTGGTGGTCGTGGTGGTGCGCAGCGGTGATGTGGATGAGGCGTGCTTCTATCGCCAGCTGGCCA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTGTTGGACCATGCCCTGACTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //