Array 1 886224-885036 **** Predicted by CRISPRDetect 2.4 *** >NC_007519.1 Desulfovibrio alaskensis G20, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 886223 29 96.6 32 A............................ CATGGGCAGGGCGTTGCGGTGGAAGTGGAAGA 886162 29 100.0 32 ............................. CCCAAATTCACCACGTCTTTTATCATCCCGAA 886101 29 100.0 32 ............................. TATCTTATCACCTTCTTGGGCGGTGGTGGACT 886040 29 100.0 32 ............................. CCGTGGCCGATGGCGTCAGCCATATCCAGCAT 885979 29 100.0 32 ............................. ACCTGCAGAAACGCGCGTTCGGCGAAAATTAT 885918 29 100.0 32 ............................. ATTAACACGCCGGAACAGATAAAGTCAGACCC 885857 29 100.0 32 ............................. GCTGCCGGTATCAAGCTCTCGCACCTGACCGA 885796 29 96.6 32 ............................T CAATAGCACTCGATGACGGCGGCGTTTCGGGT 885735 29 100.0 32 ............................. GTGGACGACATTGACACGCGGGTAACGCGCAT 885674 29 100.0 32 ............................. GTTCTGCTCGAATCGTCCCCCAGCGTACCGAC 885613 29 100.0 32 ............................. GCGCGGTCTCGATACTCGGTGTCATGCCGTAC 885552 29 93.1 32 .......................A....C GCGAAGAATACGAAGACAAGCGGGAAGACTAT 885491 29 100.0 32 ............................. GTGGCTAGCATTGCGGGCGGCTATGCGTGGAC 885430 29 100.0 32 ............................. TGTTCACATACAATGTAGTTGCTATGCTTGAA 885369 29 100.0 32 ............................. CTGTCAGCGGCGTTTTTGCGGGCTGCATAGTA 885308 29 100.0 32 ............................. CCGTCAGGCACAGGCGCCGCGTACTCATCCTG 885247 29 100.0 32 ............................. GCGGCGCGCCAAGAGTGGAACAGGCGTATTGC 885186 29 100.0 32 ............................. TCTGCCACGTCAGCATATCTGCATGTGATTGT 885125 29 100.0 32 ............................. CTGAAAAGGCAACGCGGATTTGCGGGAACCAT 885064 29 93.1 0 ........................G...A | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.0 32 GTGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : CAACGCATCATCCCCACTATTGAAGAAGTGCTGGCCGCCGGTGAAATTGCCCCGCCTGAAATTGAAGGAGTTGTTACGCCGGCAATACAGGAAAAAGAGGGTATAGGCGATGACGGTCATCGTGGTTGAAAACGTGCCTCCACGACTTCGCGGGCGCTTGGCAGTCTGGATGCTTGAAATCAGAGCAGGAGTCTATGTGGGTTCTTTTTCTGTCAAAGTTCGCGAAATGGTATGGGAAAACGTGGAAAAGGGTATTGAAGAAGGGAATGCTGTTATGGTGTGGCGTGCGCAGACAGAATCCGGTTTCGAATTCCGCACACTAGGAGCAAACAGGCGACACCCCGTTGATTTTGATGGAACTCCTCTGGTTTCTTTCTTCCCTTCTCCCGAGATTTTGGGGCTATAAAAATGTTCAATAATTTTGGCTAACTACAACAGGCAAAAAGGGTAGTTCTATTCGCTCTTATTTTAGCGTAGCATTTCAATGTGTTACAAAAGGA # Right flank : CTGTCAGCACTGAGTTGCCAGACCGCGGTAATTAGTCAGCAAATCAAAAGGAACTTTATTTATAGCTCTATATTCTTAAGCTTTACACCCCAGCCTAGCGGGGGGTTTTCTGCATACAAAAAAGGCAGCCGCAATACGACTGCCTTCATCATCAGATAAAAGACACGGCCACGAAGCCGGAACCGTTCTCTCCGGCATGCATTTTCCTGACACCAGACCGTATATGACGCTCATAACGGCAAGGACATAATGCTCCGGCAGAAAAACGGTACACAACATTTCAACGCGGCAGGCCTCTGTATGCGTGTTTGTACACAAATAAACACCCCATGCAACAAGCCGGTCACAGCACGGTCTGCGCCGCCGTCATCAGCCTTTATGCAGAGGTTCTCCGCTCCAGCCGTAATCGTGCAGATACACCCATTGATCATTGGGCATTTTTCCGTTTGCATATACGTTGCCGGCTTCCACCTCCATATAGCCCGCGTTTTCGATATGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //