Array 1 71030-69232 **** Predicted by CRISPRDetect 2.4 *** >NZ_MLYN01000066.1 Streptomyces sp. MUSC 14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 71029 29 100.0 32 ............................. TGAATGGCCGACGCGCAGAACAACCTCACCGT 70968 29 96.6 32 .................T........... ACGCCGCACAGGACCGGGATGCCTACCTTGAA 70907 29 100.0 32 ............................. CTGAGGCCTACGTCCCGGCCGTGGCCCCGGTC 70846 29 96.6 30 ..........A.................. GACGTGCACATTCGAGGAAATGGTCGAGGA 70785 29 96.6 32 .................A........... TCGCGGCGCTCGCCGCTCTGGCGGTCCATGGC 70724 29 100.0 32 ............................. TGGATCGTCCCGGCCTGGGCCGCCGGTACCGC 70663 27 93.1 32 ........--................... GTGCTCGCCGGCGGTTCGGAGCACGCTCACTT 70604 29 100.0 32 ............................. CGAGGCGCGGCCCGAAGCCGCAGGAAAGGGCT 70543 29 89.7 32 ...........AT.......A........ TCGCGCGGGAAGCCGGCCGGCCGCTGCGTTCC 70482 29 96.6 32 .C........................... GACGCGTTGCGGAAGCCGGTCGGTGCGCCGAC 70421 29 93.1 32 .............C.......A....... GGCGGACGCTCCACACCTGAAACAAATTCCCA 70360 29 93.1 32 .............C.......A....... TCCGTGTACAGGCGGTGCGCCCGCTTGTAGAG 70299 29 93.1 32 .............C.......A....... GCCGCCCAGCTCCTGGCGTGGCTGCACAAGAC 70238 29 93.1 32 .............C.......A....... CCGTGTCTCCGATGGCGTCGCGCGCCTCTCCC 70177 29 89.7 32 .............CA......A....... GAGGTGTATTCGGGGGACGCGCCGAACGTGGG 70116 29 93.1 32 .............C.......A....... ATCACGGACTTGACGTCGTCGTTGCCCTTCTT 70055 29 93.1 32 .............C.......A....... GCCGGCTGCTGCTCCCCCGCCAACCCGAGGGC 69994 29 93.1 32 .............C.......A....... TGCTTGAGCCACCACCGGTAGGTGGAGCCGTC 69933 29 93.1 32 .............C.......A....... AGACCGCATGACCTTCGAGAATTCCCACCAGA 69872 29 93.1 32 .............C.......A....... ACCATCAATGTGGTGATGGCGAACAGGAACGG 69811 29 93.1 32 .............C.......A....... CTCCTGGCGGTCAACGGTCGGCCCCTCGGTGA 69750 29 93.1 32 .............C.......A....... CCGCCGCCCGCCACTGAGAGAGAGGAAAGAGA 69689 29 93.1 32 .............C.......A....... ACCTCCACGTCCCGGCTCTCCAGCTCGACCAC 69628 29 93.1 32 .............C.......A....... GGCGGGGCGGGGGCTGCGTCGTGACGGCGGTG 69567 29 93.1 32 .............C.......A....... AGGGCGAGCCGCCGGCCCCGCTGCGCCTCCTC 69506 29 93.1 32 .............C.......G....... GCCGGGAAGCGGCCGTCCGTGCGGACTGTCGA GG [69483] 69443 29 86.2 32 ....C........CT......G....... AAGCAGTACATCGGGCATCTAGCTGAGCGGAT 69382 29 82.8 32 .....T...C...CT......G....... CGGCCCGCCGACGTCCGGGCTTTCGCCGCTGA 69321 29 82.8 32 .............CT...A..G......T GGTGCGCAGCGCCCGCCGGATCGAGCGCCTCG 69260 29 86.2 0 .............CT....A.G....... | ========== ====== ====== ====== ============================= ================================ ================== 30 29 93.1 32 GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Left flank : AGTCTGCGCAGGCCCGATGGCGCGCGATCACCGGCGCCCACCTCGTGCCCTTGGTCCGCGCGGCGCCCGGTTCGAGAACGGCGTCCTGGTCGAGCGCCAGGAGCAGGTCGCGTGACCGGGCCGAACGACTACGGCAGCTGCCAGATCTACCTGCGAGGCGGTCACCACCCGTCCGTGACGGAGCTCGTCGCGGCGGCTGTCGGAGGCCAGGCCGACGATCACTACACGGTCCGGGCGGGCCAGATGGTCTTCGAGATCCGGCACAACCCGGACGTCGGGCTGGCCGACGACTTCATCGGGTGGCCGTTCACCATCGAGGCGGAAACCGACGAACCCGGACCCGCGCTCGTCGAGGCAGTGTCACGACTCCTCAAGGCGGCCTGGAACCGCGGCTACGACGCCGTTGCCGCCTGCGACTTCGAAGACGAGCTCCCGGATCTCGGCGGACTCCCGCGCTACCCCTGACTTACACCGGATCCACAGGTTTTGACTATTCCTCT # Right flank : GCGCAGGCCGCGATCGAACACGCCCCTGCACGGCCCGGCCAGTCCTGGGCGAGCCACTACAGCCACGGCCGGTGGGCGCACGAGTCCGGCATGATCCACGCCAAGCTCGGTGACCTCACCGCAGCGGAGGAGCATTGGCACCTGGCGCTGGACATCCACGGCCTGGACCGCAAGAGGACCCGGGCGATCGTGCTCGCCGACCTCGGGCACGTCCAGCTCAAGCGCGGCAACACCGAGACCGCCCTCGCCACCTGGAGCGAGTTCCTCGACTGCGCCGCCGGCGTACAGTCCGTACGCATCCATGACGGACTGACCAACATCGCAGCCCGTCTGCCGTCCATCCCCGACAGCCCTGCCGCCGCCGATCTCGGCGAGCGCATCGCCGCCCGGGCGTGACGGCAGCACCGTCCCAGTGAGCATGCCTCCTACGCAGTAGGAACGAAACGCACGGCGCCCCAGGCGATTGCCTGGGGCGCCGTGCTGCCTCCACCAGCAGATGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 73591-72532 **** Predicted by CRISPRDetect 2.4 *** >NZ_MLYN01000066.1 Streptomyces sp. MUSC 14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 73590 29 100.0 32 ............................. GTCCACGACGGCCGTACTGCCGCTGTAGGTGG 73529 29 100.0 32 ............................. CAGGACTCCGCCGCCCCGGACCTGCTGGAGCT 73468 29 100.0 32 ............................. AGGGCGGTGGGGAGCGCCGGCCCGGTCTGCCA 73407 29 100.0 32 ............................. GGTGCCCTGGTTGAGCAGTGGCAGCGGGAGGA 73346 29 96.6 32 ........................A.... GTCATCAGGCGGTTCGGCTTCTTCACGCTTGC 73285 29 100.0 32 ............................. TACTGATGCACGACGACGATCTGCCGGAGCGT 73224 29 100.0 32 ............................. GCGAACGCCGCGACGGCGGCATGGACCCGCAC 73163 29 100.0 32 ............................. TCGGCGCGGACCTTCTCGAACTCCTTGGAGCT 73102 29 96.6 32 ............................T CGCCGGGCGCCTGCGGCGCGTTCACCGGCGAT 73041 29 100.0 32 ............................. GGGGTGGACGGCCTCCAAGCGAAGGGGAACGT 72980 29 96.6 32 ...............C............. GCGGACATGAACTTCGGGGCCAGCGAGCTGGG 72919 29 100.0 32 ............................. GCGGCGAGGGCCTCGTTTTCGTCGGCGTAGAC 72858 28 96.6 32 ........-.................... GCGCTGAAGGCTCGCAACGAACTGGTCGTGGA 72798 29 100.0 26 ............................. GCAGCGGACGAGGCCGAGGGTTTTCA 72743 29 96.6 32 ............T................ CTGGGACGCCATGATGCTCGGCGACCAGGCCG 72682 29 96.6 32 ..................A.......... TGGCTGCCGCCCTCCACCGCCTGAAACGCCCT 72621 29 96.6 32 ...............A............. GTCAGCTCGGCGCCGACCGCCTGAGCCGTCAC 72560 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.7 32 GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Left flank : GCGAAACGCCTGCCGTTCAGGCGTCAGCCCACCACCCTGCGGATATCTCACACAACCGGCATACCGCGACGATCACACATCGTCAGCCCCCAACGACAACACGCCGCAAAGGTCAGTAGATGTACCGGACGTGCCGGTGGAAGGTGCGGCCGTTATACAGGCGACGATCGACCGGACGGCACAGTGCAGGCCGACGAACCGTGGCGGGCGCTGGAGGTCCTGGCCAGAGCAACGATGTAGAACGCTCGCGGCCGAGAGCCCGGCTTCCAGGCGGCCGGGTGCTTGCTTCATCGACTCCGCCGAGGTGGCGGGGTGACCGAAGCAAGTAGCTTCGCGGGTCGCAGTATTAGCGTGGTGCGTGGAGGAGGCTCGGCGAAGTAGGGAACACGGCACGCGTTCTTCCTGCCAACAGACCGAATAACCGAGAGGGTGAATTGTCCGTTTCCTTGGAAGAGGTGACTATCCACCCATGCACCGCGTAAATGCCCAGCTCACGGCCT # Right flank : TTCGCAGAGTCGTTCCTAGTCTTGCCGCTGGTGTGGTCCCGAGCAATGCTCAGGACTTGTGGATCGGTTCCGGGAAGGACGCGGAGGGCGTACCTTCCCGAATGATCCTGTGATGGTCACCGAGTAGGCCCGCGTTCGCAGCGCGGGTCGGGAAGGCACGCCCGTGCTCAGCGTAGTCACCGACGATGGCTCCAGCAGTCCGATCTCCGAGGTGCTGCCATTGCTCTACCTGCACGGCCTGTCGTCCGGGGATTTCGTCCCGGCACTGGAGCAGTTCCTCGGCGGCGCGGCCGGCCTGTCGCCGACGACGATGACTCGGCTAACCCGGCAGTGGCAGGACGACCACGCCGCCTTCTGCGACCGGGACCTGTCGGACCGCGACTACGTGTGCGTGTGGGCCGACGGCGTGCACCCGAAGATCCGGCTCGGCCAGGCTCACTCGTGCATCCTGGTCCTGCTCGGCGTCCGCCTGGACGGCACCAAGGAGCTGATCGCACTGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 40098-39032 **** Predicted by CRISPRDetect 2.4 *** >NZ_MLYN01000018.1 Streptomyces sp. MUSC 14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 40097 29 96.6 32 .............A............... GGCCTGAACACCACCCCTTCCACCTTGGAGCC 40036 29 96.6 32 .............A............... GGCTCCGTGTCCTGCGTGTACCCGGACGAACT 39975 29 93.1 32 .............A...........G... CTCTCGGCCATACGCCCGCCTCCACGCAGATC 39914 29 96.6 32 .............A............... ATCGACACCCTCGACGGGATCGGCTCGGTGGC 39853 29 89.7 32 ..AA.........A............... GGCGCGTCCGCCTGGGCCGTACCGGTCGCGCC 39792 29 100.0 32 ............................. TTCACGCCCTGGTCGTCCACTCATCCCCTCCT 39731 29 100.0 32 ............................. GAGGAGATGTCCGAGCTGGACGACCCGGACAT 39670 29 100.0 32 ............................. GCCGGCGCCTTCCGGGCCGCCGTCAGGAACAA 39609 29 100.0 32 ............................. CTCCCTGTCCGGGATGGCAGTTGCTGTCCGTC 39548 29 96.6 32 .......T..................... GAAGTCGTCGTCCTGGGCAAGGGCGAGGGCCG 39487 29 100.0 32 ............................. ACGACCGGGGCCAAGATCCCGTCCCGAGCGAC 39426 29 100.0 32 ............................. TCGAACTCCCACCACAGGTCGAGAGCCTGCTC 39365 29 93.1 32 ..............T......G....... TCCAGCAGCTCCTCTGGCCGGGTGATGGACTC 39304 28 86.2 31 ..............T...A..G-...... CTCCGGCCGACCCGGACGAGAAGGACACGAA 39245 29 89.7 32 ..............T.....CG....... CTGCTCGCCCAGTTCGCCGCCCTCGACGACGA 39184 29 86.2 32 .........A....T....A.G....... ACCAGCGACGCCATGGGCAACACCGGATTCGG 39123 29 89.7 32 .............AT..........C... GACGTCCGCTCCTGATCGACGAGATCTTCTCC C,C [39100,39102] 39060 29 82.8 0 .....G..T....TT......G....... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 94.3 32 GTGGTCCCCGCGCCCGCGGGGTTGGTCCC # Left flank : TGCCGTGCCCCCGCCCGCCATCCGCCTGGACGGACACCTCACCCGTCCCGAGCCAGCCGCGGCCGACAGAGAGGCAGGCAACCCGGACGGGGACGGCGCGCCGCTGCAGACAGCGTTAGATGTACCGGACGTGCCGGTGGAAGGTGCGGCCGTTATACAGGCGACGATCGACCGGACGGCACAGTGCAGGCCGACGAACCGTGGCGGGCGCTGGAGGTCCTGGCCAGAGCAACGATGTAGAACGCTCGCGGCCGAGAGCCCGGCTTCCAGGCGGCCGGGTGCTTGCTTCATCGACTCCGCCGAGGTGGCGGGGTGACCGAAGCAAGTAGCTTCGCGGGTCGCAGTATTAGCGTGGTGCGTGGAGGAGGCTCGGCGAAGTAGGGAACACGGCACGCGTTCTTCCTGCCAACAGACCGAATAACCGAGAGGGTGAATTGTCCGTTTCCTTGGAAGAGGTAACTATCCACCCATGCACCGCGTAAATGCCCAGCTCACGGCCT # Right flank : GTCCGCCGGCAATCCCCCGCCGTACGAGGGGGTGGTCCCAACGTCGTGATCCTCTGCGCGAGCCAGTGAAGCAGGCGCCGGAGACCGACCCGCAACGCCCGCCCTTCGAGTCCGACGACCATGTGGACTCCCCTTTCAAGCAAGGCCGGTTGTTCGGATGCCTGAAATCACCTGGCTTCCTGACCCGTCCGGGAGGGTCGGGCGAGTGGGGCCAGCAGGCCGTCGCCGGGCCAAAGATCCTGTTCGGTCACGAGGCTGGCGAGGAAGGCTCCGACCTCGGCCAGCACGGCGGCCCGCTCGGCGGACCCGTAGACGATGAAGTCATCGGCTGCGGCATCGTAGGCGCGTACGTGGCTGTGCGGGCCGTTGCAGACGAGGGCGCGTGCGATTTCAGGCAGGCCGAGGCTGAGGGCGTCGCATCGGCCTGCACGGACGAGTTGGACCAGGTCGGTGGTGACGTACTCCCAGTCGCCGACTTCCGGCCAGTCGGCGCCTCCGCC # Questionable array : NO Score: 5.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCCGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [23-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //