Array 1 247024-246695 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHJU010000005.1 Streptosporangium album strain DSM 43023 Ga0436960_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================= ================== 247023 29 72.4 87 C..AC.......TG.......AG....T. CGAGGGCTGAGGGCGGCTTTGATGCGGTCGGCTCACCCCACGTGCGTGGGGAGGACGGTGGCGGTGAGCTCACCGGACCGCACTCGG C [246998] 246906 29 72.4 32 .CGGCT.A.C.C................. TTCGCGCGAGCGACCTCCGCCTCCGCGTGGAG 246845 29 100.0 32 ............................. GGCGTGTTCGTCCACCAGGAGCCCGTGGTGGA 246784 29 96.6 32 ....................T........ TCGGTGGCGCCAACGCCCTGGTCGCCGCAACC 246723 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================================================================= ================== 5 29 88.3 46 GTCCTCCCCACGCACGTGGGGGTGAGCCG # Left flank : TCGTCGCTCGGTACGCTCCAGCCGAGGTCGTCGCCGGGCGCGGCGATGTAGCCGTCCAGGCTCAGGTTCATGCCGAAGATCAGTTTCCGCATCGTGCCAACCTCTCGTGAGTCGATCTCACACGTACAGACGGGCGCGGCGCGGAAACCTAATCGGTGCGCGATCTGCGTCCGCAGATAGTCCCCCGGGTTCCGGACTCAGCACGGCGTACCCGGCGGGCTCGAGCACCACCCACCGGATCTCGACTTCACCCTCGCACGGGCAGCGGCGCACCCATGGCCAGCTCTCCCCGACCGCTGCTGCCGTCTGCCCGGACGGGAAGGCCTTCCACGGCCACCTGCAACAGAGGCTGTCTACTTTCGCAGAGGCGTTGCGGTAGCGCTCGACGCGCTCGCTGCGCGAGCAGGAGTGTGAGCGATCTGGGTCCCCGAACGCCTGGTCCCACAGCTACAGCGCCGACAGGACGTCCGTCCGGAGGTGACCCGATGATCACGCAGCGG # Right flank : CCAGTACTCGCCGTTCTCGTCCTCGCGGCGGAGTCCTCCCCACGCACGGGGTCCCGGTAGTCCTGTCGAAGAATCCAACACATATAGCTCTGACCTGCGGCGGTGTGGTCAGGTTCCTGTTGTGAGCTCGGCGAACTCTGAGTGGGCCTGGGCGACCGCGTCGGGGTAGGCCTGCGCCTTGTCGTGCTCGGCCAGGGCGCGGTAGATGCTGGCCAGGCTGGGGTTGCGGCCCTTGCGTTTCCCGGTGGGGATGATCAGGTCGGCTCGGATGGTCTCGACGGACTCGCCAGCGGCCCTGCGGCGCAGCACGGTGTGCAGCATGTCCTCGGTGATGACGGCGGGCCGTCCGCCGTGGTTGCCCTTGCGGGCGGCGGCGTCCAGGCCCTCCAGGGTCGCCTCCCGTATGGCTTCGCGTTCGGTTTCGGCCATCGCGGTGAAGAAGGCGAACAGCATCCGGCCTGGGCCGGATGGGTCGTACAGGCCCGCCAGCGGCCCGCCGA # Questionable array : NO Score: 4.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:0, 6:0.25, 7:-1.29, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3789863-3793629 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHJU010000001.1 Streptosporangium album strain DSM 43023 Ga0436960_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 3789863 37 100.0 36 ..................................... GTCTGTGAGACTCGGGGGAAAGACGGGGAGACGCTG 3789936 37 100.0 36 ..................................... CTCCGTACGGCCTGACAGGGGGACGACATGACCACC 3790009 37 97.3 35 ...............T..................... CCGAACCAAGGGAAACGACCAGGCCACCGCGTATA 3790081 37 100.0 37 ..................................... GTGATCGCGGGAACGATAGCTGGCGGGCTGGGCCTGC 3790155 37 94.6 36 ...........T.C....................... ACCCAGCCGAACGATGAGCTGCTGCATGGCCTCGTC 3790228 37 100.0 35 ..................................... CACGGCGACGCCGCCGCTCAGAGCGGCCACGTCCT 3790300 37 100.0 36 ..................................... ACGAAGCACGGCGCCTTCCAGGCAAAGGAGTATCAG 3790373 37 100.0 36 ..................................... ATCGAGTGCAACCCCAACGGGCAATGGGCGTGGCTG 3790446 37 100.0 34 ..................................... CACTCCTCACGCTCGCTCTGGAGAAGCTGCCGTA 3790517 37 100.0 36 ..................................... CTGGGCGGCGCCTGGGCATCGGCGCGATGACCGCGG 3790590 37 100.0 38 ..................................... GCCTACGGCATGTTCGACCGCGACGGCCACGGCTCCAC 3790665 37 97.3 38 .T................................... GCCTACGGCATGTTCGACCGCGACGGCCACGGCTCCAC 3790740 37 97.3 35 .T................................... GAGTACGGCGGGATCGTCCCGGCGGACCGGTCACA 3790812 37 100.0 36 ..................................... GTTGACTCCGGCGCTTACGACGTCGGGTTAGACGCC 3790885 37 100.0 38 ..................................... CGCGGTTCGGTCAGCAAGCTGCGCGATAAGAGCATCAA 3790960 37 100.0 38 ..................................... CTTGACGTGCGCGGTCAGGAAGGTGAGCATGCTGATCG 3791035 37 100.0 37 ..................................... TTGCGGGCCTCGTTCGGGCGGACCACCACCTCGACCA 3791109 37 100.0 37 ..................................... AGGAGCTTGCGCAGCTCCACGACGTGCTCGCTGGTGT 3791183 37 100.0 34 ..................................... ACCGACAAGCTCTCCGGCAAGAACACCAACCGGC 3791254 37 100.0 38 ..................................... GACGTCTTGGGTGTCGGTTTCCGGGGTGACGGCGGCGA 3791329 37 100.0 37 ..................................... CATCGGGTGATGGGCACGCCCGCCCGCAGACTGTTGG 3791403 37 100.0 37 ..................................... TGTGGCACCCCTGGGTCAGGCAGACGGGATGATCACG 3791477 37 97.3 37 ............T........................ ATGATCGGCGTCACCGGTATCGTCCGTGACTCTGACG 3791551 37 97.3 35 .T................................... CTTGGGAAGGGCGCCACCCCGGGGGTAGTCGCCGC 3791623 37 100.0 36 ..................................... TTCGGGCTGCGGGCATCCCAAGCAGACCTTGGCATG 3791696 37 100.0 38 ..................................... ATGGCGGTGCGGTGGGGTGAGGCGCTCGCGTTCGGCCC 3791771 37 100.0 35 ..................................... ACGACGGACGCTCGCTCAGGTTGACCAGCTCGCCC 3791843 37 97.3 38 ..................A.................. TACGCTCAGCAAGCCCGCCCTCCCCAGCCGGCGAACAA 3791918 37 100.0 36 ..................................... AAGTCCGGCGTCACCCGCACGCTAGCCGGCCTGGAC 3791991 37 100.0 35 ..................................... GGACTGATTGCCGCAATCGTCGTCCACCACCTGAA 3792063 37 100.0 39 ..................................... CGGGGCGGCAAGTCGTCCGGGCAGCAGGGGTACGCCCGG 3792139 37 100.0 36 ..................................... ATTCGTCGTTCGGTCTCCATGGCCACGATGCGGATC 3792212 37 100.0 36 ..................................... AAACGGGGCCTGGAGCAGAACGTCGTCGGTTTCCTC 3792285 37 100.0 34 ..................................... CCAAGTCGGCCGGCGCCCCGGCCAGAACCCGAAA 3792356 37 100.0 36 ..................................... CGCAAAGTCGCCTCCACATGGTCGGCCGCCCCGGAC 3792429 37 100.0 36 ..................................... TCCGTGCTGACGTGCGCGGTGCGTGCCCGGCGCAAC 3792502 37 100.0 36 ..................................... CGCAAAGTCGCCTCCACATGGTCGGCCGCCCCGGAC 3792575 37 100.0 36 ..................................... TCCGTGCTGACGTGCGCGGTGCGTGCCCGGCGCAAC 3792648 37 100.0 35 ..................................... CATGTGATCAGAACCTCTTGATCGTGTACGTAGTG 3792720 37 100.0 36 ..................................... GATCTGCCGGTAGAGGCCAGGACCACAGATCAACTG 3792793 37 100.0 36 ..................................... GATCTGCCGGTAGAGGCCAGGACCACAGATCAACTG 3792866 37 97.3 35 .......................A............. ATGACCGTGAAGCGGATCGCTGAGGAGGAGCCGAC 3792938 37 100.0 36 ..................................... GGGTACGAGGACGATGGCATCACGCCGCGGCCGAGC 3793011 37 100.0 35 ..................................... ACGGGCCTCACGCTCCAGGCGCTCGGCCCGTTCCT 3793083 37 100.0 35 ..................................... TCCCGGTGGCCGTCCTCGGGCGGCGCCTGGTCCCA 3793155 37 100.0 37 ..................................... ATGTAGAGCCCCGGCAACTGGTGGAACAGTCCCGGGG 3793229 37 100.0 36 ..................................... GTCGACCCGGGCCGAACTTCACCTACGTGCGGACCG 3793302 37 97.3 35 ...........T......................... ATCTCGGTCAACAACGGTGCGACGTTCGCTCTCCA 3793374 37 100.0 36 ..................................... TGGGGCTACTGGAACATCGAGCGCGTGACGGCTCAG 3793447 37 97.3 38 ....................C................ TCCCCGCCGGCCCCGGCCAACCCGGACAACCCGACCGC 3793522 37 97.3 34 ....................C................ TATGCGGCCACCCTCGATCCGGAACGCATCCGGG 3793593 37 75.7 0 .............CCT.............TGG..GTT | ========== ====== ====== ====== ===================================== ======================================= ================== 52 37 98.9 36 CCAGCACCGGCCCTTCGGGGTCGGTGAGGATCGCAAC # Left flank : ACACCAAAGAGACCGAGATGGGCGGCAAACACGCCATCGCCTACGGCCTCTACCGCGGAATTGGCCACTTCAGCGCCCCCCTGGCCGCCCGAACCGGCGTCACCTCCGAAGACCTGTCCATGCTGTGGCGAGCCCTCACCTTGATGTTCGAGCATGACCGAGCATCAGGCCGCGCAGAAATGGCCCTACGCGGTCTCTACGTTTTCACCCACGCCGACGCCTTCGGCACCGCCCCCGCCCACACCCTCACCGACGCAGTGAAGAACAAGCTCATCATCCCCGAAGGCCAACCGGTGCGTGACTTCGCCAACTACAAAATCACTATCGACGAAACAGCTATCCCCGAAGGCGTAACACTCACCCGCGTCATCGGCTGAACAAGGGGATACAGCACAATCTGTTACTTGATAAGTAAATTGAACAACCTCGATGGTCAGGCCTCTATGGCATAGTGCCGTGATTGCCTACCTGGACGATCAAGAATCGCAGCGCCGGCTTCT # Right flank : TGATCGAGCCGGTATGAGCGTGCAGGCGGCCGAGAAGAGTGCGCTGCATGGCATGCTCTCTGTCTCAGGGGCCGGGGCATGTTGCTGTACAGCAGTCGCATACAGCAACGCCGCCTTACACGATCACACGCCACCGACCTGCATCTACCGCTTGACCAGCACATGAGCCCTGTGACGTGCATACTGCCCTTGGCTTGTAAACAGAAGGTCAGGGGTTCGATTCCCCTCGTCGGCTCGCAATGAGAAAGGCCCCTGAACAGGCGTTACGCCGTCAGGGGCTTTCCCTTTGTCGAGGCGATTTCGCGATCTTGCTAACACCTTTGCTAACAGTGGGAGGACCGGCGGCTTTGAAGTGGCATCCAGGCATGTGGACCTACGATCCGGAAGCCGAAGGCACCTACGTCTACCTGCACGGCCCGACCCCTCCGGGGAGTGCGGTGAAGACGGTCACGGTGGACGACGCGATGGTGAACTTCGACCTTGACAAGGACGGCAAGGTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCACCGGCCCTTCGGGGTCGGTGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.10,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //