Array 1 1081386-1082452 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKKA01000001.1 Streptomyces griseus subsp. griseus strain 30 NODE_1_length_1536173_cov_111.536, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1081386 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 1081447 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 1081508 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 1081569 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 1081630 29 100.0 32 ............................. GTCGCCGAAGCAGTTCGCATCATTCGACCGGA 1081691 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 1081752 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 1081813 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 1081874 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 1081935 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 1081996 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 1082057 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 1082118 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 1082179 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 1082240 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 1082301 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 1082362 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 1082423 28 82.8 0 ..................TCC...-C... | T,G [1082441,1082451] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : CGTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1085596-1086662 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKKA01000001.1 Streptomyces griseus subsp. griseus strain 30 NODE_1_length_1536173_cov_111.536, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 1085596 29 100.0 32 ............................. GTCACCGCCGTCGACATGAGCGACGACCTGAC 1085657 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 1085718 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 1085783 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 1085844 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 1085905 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 1085966 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 1086027 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 1086088 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 1086149 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 1086208 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 1086269 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 1086330 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 1086391 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 1086452 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 1086513 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 1086574 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 1086635 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 18 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCCCGCGCCTTCCTCCATCACCGCCTCACCCACAAAATCCCACCCCGGCTCACCACCGACCATGCACAACCCCCCGCCCCCACCCGCCGCATCCTCATGGAATGCACCGACTGCGGACGCCCCGGCCCACCGGAAGCCCTCCCCGACGGCCTCTGTCACCCCTGCCGCACAACCCACACCGCAGACCCCGAAAACACACCCCACCCCGCCGACATCGCCGACATCAGGGCCCACATGAGCAACCTCCGCAGCCTCCTCAAACCCGTCTGAGCTCAACAACCCGCCTGCCTCACAGCCCCGGCACGGACAGGCCTCAGCGAGGTGCACCGACGTCCTCCTTCAAGAGGCCGCCTCTCGCCGCCTTGGAAGGGCAGAATCACTCCCGACACGCTTAAAGCTTCGAGCAGGCCTATGCACACCAACCAGAGGGCGATATGTCCATTTCTCGGGAAGTTGTCAAAAAGCACCACGCGCCTGAGTAAACCCGCAGGTCACGGACT # Right flank : CATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1096645-1098135 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKKA01000001.1 Streptomyces griseus subsp. griseus strain 30 NODE_1_length_1536173_cov_111.536, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1096645 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 1096706 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 1096767 29 96.6 32 ............................T CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAG 1096828 29 100.0 32 ............................. ACCCCCTGACCCCCGGGCTGCCCTGTCGCCCC 1096889 29 96.6 32 ............................T TCGGCGGGGGTGTTGATCGGGGGCCCGTGCAT 1096950 29 100.0 32 ............................. ATGCCCCAAGCGCCTATGTGCCGGGTCTACGA 1097011 29 96.6 32 ............................T CCGCGGCGCTCGTACGGCATCCACTCGGCCCG 1097072 29 100.0 32 ............................. TCGGCCTGTGTCAGGCGCCCATGTTTCTGCCA 1097133 29 100.0 32 ............................. GTCCACTCGGGCTCGACGCCTTGTTCGTCGAG 1097194 29 100.0 32 ............................. CGGCCGGACACGTACTGCCAGATCTCCGGGGA 1097255 29 96.6 32 ............................G ATCATCGGCTGGACTACAGCCGCTTGGGACTG 1097316 29 100.0 32 ............................. TGGACGCTCAGCAGGGGGGACATCGGCGTGAG 1097377 29 100.0 31 ............................. AGGCCCTTGTGGGCCTCTTGTTTCGTGATCC 1097437 29 100.0 32 ............................. CTGCGGCAGATCGCGGGCTCGTGGACCGTCCC 1097498 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 1097559 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 1097620 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 1097681 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 1097742 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 1097803 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 1097864 29 100.0 32 ............................. TTCTCCGGCGCCGACCAGGCCCGCACCGTCAT 1097925 29 100.0 29 ............................. GGGGGCAGCCTGTTCCCGTACGCCGACGC 1097983 29 86.2 33 ..C...T..C..............A.... CCGAGGACGGACGCGCGGGACTTGGTGCGGCCG G [1097988] 1098046 29 93.1 32 .............A.......G....... AGGTCCCGGCCGCAGTAGTCCTCGACGAGCCC 1098107 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================= ================== 25 29 98.4 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : GCCGCAGACGGTCAGGCCCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTCGGGCGGCTCCCGCTCTCCCGCTGGACGCCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTTCGATCGCGGTCGCCGCCGCCCGTCGCGCTGCGGTCGGCGTACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGAAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGACGCATCAGTGAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //