Array 1 366-88 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTI01000017.1 Bacteroides uniformis strain BIOML-A2 scaffold17_size91947, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 365 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 288 47 100.0 30 ............................................... TTTTTTGCCATCATTTTCTCACCAAGTTGT 211 47 100.0 30 ............................................... CCCTTCGCAGGTATTCGTTATGTTCATCCT 134 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 98.4 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : CAACTTACGCATGTAGCTAACACTTGAAAAGGGACCCGGGTAGCATTTGAAACGTGTACCACCCGATAGGTTTTGCAAAGTTAATTAA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 77156-75649 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTI01000022.1 Bacteroides uniformis strain BIOML-A2 scaffold22_size77262, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 77155 47 100.0 30 ............................................... TCAAGTCCTTTCTTAGATATACCTATATGA 77078 47 100.0 30 ............................................... GTGCTGCCTATTCAAATATTCTTCCTTCCA 77001 47 100.0 30 ............................................... AAGCCGTCCGCATCGTACAGTCTCACGGCA 76924 47 100.0 30 ............................................... CCAAAAGCTCGTCACGCTTGTTGTAGTGCT 76847 47 100.0 30 ............................................... TCTATGGTCCTTATTGAAGGAAGGCGAAAA 76770 47 100.0 30 ............................................... GCGGTTGGCAGTTACCTAAAGACAGCGATT 76693 47 100.0 29 ............................................... TATATCGTTCGCTGAGAATTGAATATTCT 76617 47 100.0 30 ............................................... AAATGAACATTATGGCGAAGAAGCCATTCG 76540 47 100.0 30 ............................................... GTTAATTTTTATAATCTCGCCACAAAAATA 76463 47 100.0 30 ............................................... CGTGTCGGTGTCCCACACATAGCCACACAA 76386 47 100.0 30 ............................................... CTTGAATAATTCTAAGCTTTTTAAATTTCA 76309 47 100.0 30 ............................................... GCCGTACAGAAAAAACGCATAGGACTTATA 76232 47 100.0 29 ............................................... AACATATTACAAGTAAGAGCAACAAAAAA 76156 47 100.0 30 ............................................... GCAATTCAACGCCCGGCTGTATAGGCAGGG 76079 47 100.0 30 ............................................... GCCGGGCATATACCGCCCGATACGATTCGA 76002 47 100.0 29 ............................................... AATCTCTTTCGCGTAATCAATAACGAATT 75926 47 100.0 30 ............................................... CCGTTTTTGTTTGTAAATTTGTATTGTTTA 75849 47 100.0 30 ............................................... GATGACCGTCGTAACCGACGGAATCGACGG 75772 47 100.0 30 ............................................... TGATACACAATATAGGGCATTTTCCATATT 75695 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTTGTTCGGTTAAACATACCCATGGGTGGGGCACTTTTTAAATGTTGTTCCGGGTCCCTTTTCAAGTGTTAGCTACAAACTTACGCATTTTTAATTACATTATTTA # Right flank : TGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTGTTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //