Array 1 45115-47253 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUI01000004.1 Ligilactobacillus salivarius strain FXJKS17M7 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45115 36 100.0 30 .................................... AAAGCTAAAGGATCGTTATATAAGGGAAGA 45181 36 100.0 31 .................................... TCAGTAAATGCTTGCAACTGTTTTTGTGTTC 45248 36 100.0 31 .................................... TCAGTAAATGCTTGCAACTGTTTTTGTGTTC 45315 36 100.0 30 .................................... TGAAAAAACAGAACAAAGACAGCTAGCTAT 45381 36 97.2 30 .................................G.. AAAGCTAAAGGATCGTTATATAAGGGTAGA 45447 36 94.4 30 ............G...............G....... GAAAAGACAAAGGAATGAATTAAACGTATT 45513 36 100.0 30 .................................... AAACCAAATGCAATGAATGTAAAGCCATCT 45579 36 100.0 30 .................................... GAAAAGACAAATGAATGAATTAAACGTATT 45645 36 100.0 30 .................................... GATTCAGAAAATCCTACGCTACGCCATTCA 45711 36 100.0 31 .................................... AATATATCTAGCTTATTATACCATAGACAAG 45778 36 100.0 30 .................................... GATTCAGAAAATCCTACGCTCCGCCATTCA 45844 36 94.4 31 ..................C........T........ AATATATCTAGCTTATTATACCATAGACAAG 45911 36 100.0 30 .................................... GTAACACCACCAGAAACGAAGTTTAACATT 45977 36 100.0 30 .................................... TGGTAGAAATCGAAATAAGATTAACCATGT 46043 36 100.0 30 .................................... TTGTACACTTTTGGTTCGACTCTGCTGTAA 46109 36 100.0 30 .................................... CTAAGGCCATTAGCGCAGTTCCTAAAAAAT 46175 36 97.2 30 .................................T.. ATGTAACATAGTTAATACATTACGCCCTTC 46241 36 97.2 31 .......C............................ TCAGTAAATGCTTGCAACTGTTTTTGTGTTC 46308 36 100.0 30 .................................... ATGTAACATAGTTAATACATTACGCCCTTC 46374 36 100.0 30 .................................... TAACAGTCGTGAAGCATGTGCTTATATTCA 46440 36 100.0 30 .................................... TGGGATGATGTTTTTTTTCCTCATTGGCTA 46506 36 100.0 30 .................................... TGACAGTCGTGAAGCATGTGCTTATATTCA 46572 36 100.0 30 .................................... TGGGATGATGTTTTTTTTCCTCATTGGCTA 46638 36 100.0 30 .................................... TGACACAACCCAAACAAAAGATGGTGCAGT 46704 36 100.0 30 .................................... TGGGCTGATGTTTTTTTTCCTCATTGGCTA 46770 36 97.2 30 ............A....................... TGACACAACCCAAACAAAAGATGGTGCAGT 46836 36 100.0 30 .................................... AGCTATTAGTCAAAAAAGACTAACAGCTCA 46902 36 100.0 30 .................................... TGAGGCTAGTTTGAAAGAACAATCAGATAA 46968 36 100.0 30 .................................... TTTGCAGCTTCCTCACATCTTTATCACCTA 47034 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 47152 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47218 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 32 36 98.0 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //