Array 1 107629-108589 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHZSL010000002.1 Streptococcus gordonii strain 14-4065 NODE_2_length_391312_cov_50.197947, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    107629	    36	 100.0	    30	....................................	ACAATCATCAGGACGAGTTTATGCTGATCT 	
    107695	    36	 100.0	    30	....................................	CCAACCCTTTAGAGTGCAATTTCTTAGACG 	
    107761	    36	 100.0	    30	....................................	AAGTTTCCGTAAATACCTAAGCAGACACCG 	
    107827	    36	 100.0	    30	....................................	TAGCTAGAACTACGAACCAGAAAGAATATC 	
    107893	    36	 100.0	    30	....................................	AAAAAGGGGCAAAAAAGGGGCAAACTATTT 	
    107959	    36	 100.0	    30	....................................	AAATCTTTTCAGGTGTTATCTGCGTGATGC 	
    108025	    36	 100.0	    30	....................................	TAACACCTGTCAAAATACCTTGAATAGTTG 	
    108091	    36	 100.0	    31	....................................	TCCTGATGCAATCAACATGCCTCAAAGATAA	
    108158	    36	 100.0	    30	....................................	GTTTTCCCCTTTTTAGGGGATCAGTCTGCC 	
    108224	    36	 100.0	    30	....................................	TTGCTTCCCTTAGTCATACGCACGTGGTCT 	
    108290	    36	 100.0	    29	....................................	AATGCTTGGCCTTAATTCTCTAGGTGTTG  	
    108355	    36	 100.0	    30	....................................	TCGTGCAAATTCAAGACATCTTTCCCCACC 	
    108421	    36	 100.0	    31	....................................	TAGGACCTTCAAGCACAATCACATCAAATGG	
    108488	    36	 100.0	    30	....................................	TAGTTGTAGACATGAAGTCTAAGCAGTTCA 	
    108554	    36	  80.6	     0	.........................G.G..ATT.GG	|                              	
==========	======	======	======	====================================	===============================	==================
        15	    36	  98.7	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                               	       

# Left flank :   TGGACGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTGTTTCCTTCAAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTTCATATGAGTTTATCAATAGAGGATCAAGTAGTATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCAGTATTAAATTAGTCAATCCAATGTTATTAAAATATTTGGAAGAATAGTATTGACGAGTGAGTTTTAAGGCTTTATAATGTTTTTGAGATACAGAAACCAAAATTGACGAATTTGAG
# Right flank :  GTTATGCTATACGAATTTATCCAAAAAACAACCACCTAAATAGGTGGTTTTTTCAGTATCTATCATTGCTTACTAGAAGAAGAACTTGAGTTGCTTGAGCTGTCGCTACTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAAGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTCGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCATTACGAATGTCATCCAGTTCTTTCTTGATGGTTTCGTCTGGATTGGTAATTTCCTCACCGGTTTGAGTGTAGTAAGTCCGTCCGTTGAAGCTAGTGTATTTTGG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//