Array 1 23541-21787 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVLT01000006.1 Lacticaseibacillus rhamnosus strain 319_LRHA 403_41839_1123199_71+,...,285+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23540 36 100.0 30 .................................... CCTTATGACGGCGTAGCCATAAACTTACAT 23474 36 100.0 30 .................................... TCATACACCACTGTTCAGTATTTACACTCG 23408 36 100.0 30 .................................... AACATCTTTTTTGTGTGCGGAAACATAGTC 23342 36 100.0 30 .................................... ACAATTACCCCAGATTGACCCAAAACGTCT 23276 36 100.0 30 .................................... TGTGTCGATGAGTTGGCTGCAGGCGATTGC 23210 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 23144 36 100.0 30 .................................... CTGATTCGCAAAATCCCGGGCGTGGGCTGA 23078 36 100.0 30 .................................... TGGCTGGCAAATTGTTGGAGATGCTTTTGC 23012 36 100.0 30 .................................... GGGTTATGGGGCGTTAAGCCCATTGATTTA 22946 36 100.0 30 .................................... CAAAAATGTCAATGTGTCGATGACCTGGCT 22880 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 22814 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 22748 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 22682 36 100.0 30 .................................... TCTTCTGCCATATCCTGACCCCCTTAAAGA 22616 36 100.0 30 .................................... CATAAAAGTGATTAGTGTCGATTGGCGTGC 22550 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 22484 36 100.0 30 .................................... ACGATGAAGAAACAGAAGAACTTGACGGCG 22418 36 100.0 30 .................................... CGATTATTGCGCCAATCACCACTGGGTTCA 22352 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 22286 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 22220 36 100.0 30 .................................... TGTATTTTGTACCCCCGTGTTACTTGACGG 22154 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 22088 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 22022 36 100.0 30 .................................... ATTTCGGCGATGGCCGTCTATCTAAAGATA 21956 36 100.0 30 .................................... GGCCAGCGACTGGGTGCAACAATTACTGTT 21890 36 100.0 30 .................................... CTTAGAATAGCTTTATTGATTTGGTTATTT 21824 36 83.3 0 ....T..................AA.C....G...A | T,C [21790,21796] ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.3 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGATGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //