Array 1 81165-79084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOGY010000007.1 Clostridium perfringens strain 2C8 NODE_7_length_140550_cov_86.7597, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 81164 36 86.1 30 A...ACA...A......................... ATGAAATTATATTTTGTCTATAACATATCA A,A [81150,81156] 81096 36 100.0 30 .................................... GCTAGAAAAGTAGCTGAGAGTAAAAGAGTT 81030 36 100.0 30 .................................... TGAGCTGAACCAATAGCTCCATCTGCAATT 80964 36 100.0 30 .................................... GCTAATTTTATATCACCTTTAGAATTAATA 80898 36 100.0 30 .................................... TGGAATTCAGATTTCAATTTAGATGAAGTT 80832 36 100.0 30 .................................... AATGTAGATCCAGCCTTATTAAATGGAAAT 80766 36 100.0 30 .................................... ATGGAAATATGGGGATTAAGCGAAGGGGTT 80700 36 100.0 30 .................................... TCATTTGGTTTAGGGGTATATGATAACTTA 80634 36 100.0 29 .................................... CTATTGCGATAAAAAAGGAAATATAATTA 80569 36 100.0 30 .................................... GCTTATGATTATTGTATTTCCAGTGATTTT 80503 36 100.0 30 .................................... ACACCACAGTTTATAACTACATCATTTGGG 80437 36 100.0 30 .................................... GCTAATAACGATGATTATTTAGCATTAATG 80371 36 100.0 30 .................................... TATGAAAATCAACAACATAGTGGTTTAAAT 80305 36 100.0 30 .................................... AATAATTGGGTAAATAAAAAGAAGAAAAAA 80239 36 100.0 30 .................................... GTAAAAGTTAAAAGGGTTTATAAATTATTA 80173 36 100.0 30 .................................... ATTTATTTTCTCTTAAACTCATTAAGATAC 80107 36 100.0 29 .................................... TGAAGCTGATTGTATTTGTAGTATAAATA 80042 36 100.0 30 .................................... ACAGAAAACTATGAGCATAAGTTTGAAAAT 79976 36 100.0 30 .................................... TAATGCTTTTAAATTTAGAGTAAATAAATT 79910 36 100.0 30 .................................... CTTCAATGGTTAGCAGATCACATGGGAATA 79844 36 100.0 29 .................................... TATTGGCTGCTGCTGCGGTAGCACTAAGA 79779 36 100.0 30 .................................... GAGAGGTAAGAGAAAGCCATCAAAGAAGGT 79713 36 100.0 30 .................................... TAAAGGTTGTGGAGTTATAAAGCCTTTAGG 79647 36 100.0 30 .................................... GGAAACGATAATCTAGTTACACTAGAGAGC 79581 36 100.0 30 .................................... GTGAAACGAAGTGAGGGCAAAGCCCTTTAA 79515 36 100.0 30 .................................... ATCAATGATATTTGTAATGAGTTAGGTCTA 79449 36 100.0 30 .................................... CCAGGAACTACAGAATATATGTTGAAAATA 79383 36 100.0 30 .................................... AAAGACCCAAATTTCTATGAAGAAAAGCTA 79317 36 100.0 30 .................................... TAGTTGCTCTTATATTCATTCCTTTATCCT 79251 36 100.0 30 .................................... TTATTTTTTATAGGGAACTTTACGGGGAAC 79185 36 100.0 30 .................................... AAAAAGGTTTATGATAAATCTAAGCAGTTA 79119 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.6 30 GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Left flank : AGTTTCTAAAAGCAGCAAGTCTATCCTTATTCTTAAAGAAAGTATTGTAAAAAGTAAATGCTTCCTTAAGATAAGGATTATTAACTTTCAATTCTCTCATAATAACAGTAGCTCTATCTGTAGAAAATTCCTCACTATAAGATAAAATATCATAAAGCCAATCTTCCTGTGGTTTAGGTTTTTTCATATTAGAATAAACTAGAATATTTCCATCTACATTTTCTTTTTCTATATGATATTTAGTATAAAAAGCATTGTTATCATTTAACTTAATAAGCTCAACACCCTCTAAATCAAATTCATCTATCTCTTCAGTAAAATCCTCATTTTCATCATACCAGAAAACAATATGACGTACTTTTCCATCACCTAATGGTTTTGAAAAAATATCATTAAGGAAATTCTTAATTTCTTTTAAGTTCATTTGTCACCTCTAAATAAAATTTTATAAATATTTTTTAAATTAATATATAATAATATAATAACTTAAAAGTAATAAA # Right flank : TAGGAACTAATGAACCCCTTGAAACAACTAATTTCAAGGGGTTTTTACTTTCTAAAAAACATTCAATTGTCGTGAATTTATCTTCTTTTCCTGCTTTTTTGGTGATCCTACTAAGAATTTCATTTCTGTATATTGCTTTTCTGTAATCTGAAGATATCTTACTGATCCTTTTGGTGGTAAATTTTCTTTTAGTCTTGCTACATGTTTATTTACTCCATCAATACCATTACATATTCTTGAGTAAACAGAAAACTGAATCATTAAATACCCATCATTTAATAAAAATCTTCTAAAATTTTGATATTCTTTTCTATCTTCTTTTTCAACAACTGGCAAATCAAAAAATACAAGTATTCTCATAAACTTTTTACTCATAATAATGATATTCCAAAGGCTTTATCTCTGGTAATTTTAATAATCTAAAATCTTTTTTACTGCAAGCTGTTGTATAAGAAGATATCATTTTATCAATTCCATTTAAAATAGAATGATTTTTTCCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-96.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //