Array 1 325023-325930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFUC010000002.1 Enterococcus sp. S23 NODE_2_length_609715_cov_49.235723, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 325023 33 100.0 34 ................................. TAGCCGAACCATAACCAATAGTAATAACACCAAC 325090 33 100.0 34 ................................. ATAGGATTAGATGTTCCATTGTTATGCCAAAATC 325157 33 100.0 34 ................................. TTCAAAATCCACAATGCCAGCTCTACGCCGTTGA 325224 33 100.0 34 ................................. AATAGACATTGGTTCAATGAGGGATACGCTCGAT 325291 33 100.0 33 ................................. TCGTATAGGTTTAGCTACTCTAGTAAACACTTG 325357 33 100.0 37 ................................. ATTCAGATGGAACAGACGGAATCAGTCATACTTTAGC 325427 33 100.0 33 ................................. ATTTCTTTCTATTGATATAGTAGTATCTACGTC 325493 33 100.0 34 ................................. AACTAGTTAATGAAACGATGTCATTTAAAAGTAA 325560 33 100.0 35 ................................. ATTACAACAAAAATCATGTCGATTGCTCAAATTTT 325628 33 100.0 34 ................................. AAGACCAACACCACAATCACAAATCTTACAAACG 325695 33 100.0 36 ................................. AAATGATCGATGTTGTCAAAATTGATTCTACCGGTA 325764 33 100.0 36 ................................. CAATCAATTTCAGGAGATTCAAGATGCTGCTGTCGG 325833 33 100.0 33 ................................. AAGATGAGATAGAAGCAAAAAAAGAAAAGTATT 325899 32 78.8 0 ......................AC.-..C.TTC | ========== ====== ====== ====== ================================= ===================================== ================== 14 33 98.5 34 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : CGCCATTTTTATGGAAGTAGGTGAAAAGAATGTTAGTATTGATCACTTATGATGTAGCTACAAGTTCAAAAAATGGTCCTAAACGGTTGCGTAAGGTAGCGAAAAAATGCCAAGATTATGGACAACGTGTACAAAACTCTGTTTTTGAATGTGTCGTTGATGCGACAGAGTTGACTAGGTTGAAAAAGGAATTGATTGATCTGATTGATGAGGAAGTAGATAGTTTACGGATTTATCGTTTAGGGAATAATTATCAGACCAAGGTAGAGCATGTTGGTGCAAAAGAAAGTTTTGATGTAGAAGCACCGCTGATTTTTTAATATAGAATTTCGGTGCGAATCCTAAGTGCACATAAAAATACTAGAGGACTCGCACCAAAATTTGGGTTATTTGAGTATGAAAAATGTAGTTTTTCTAATTGAATTTTAATTTTATTTTGAATTAGACGTTTTTTTAGTGGATTAGTTGAGAATAGTATACTTATTTTGACTAAATTCACA # Right flank : CCTAAATTCCTTTATAAAAACTCGAAGTCCAGTAGGTCATGATTGACCTTACTTTCACTCCATACTACAAATCTAAGAAGGGAAAATAATAGAGGGTAAAGTCATCGACGGAGGACTTTACCCTCTATTATTAGTATGTTGTATTGAATATTTCTAATCAAATTCATAGAAAAAATAGGAATAACTTGTTGTGGATAAGAACAATGGTATACTGCTAATGAGGTGAAATTCATGATCATCAGAGAAATTCTAGAAAAAGACGACAAAGCAATCGAACAAATCATAAAAGAAACACTTGAATCTTTTGACCTAGCTATCGAGGGAACGGCATACTTTGATCGTGAACTAAGACATTTAAGTCACTATTATGCGCGTCAGCCGCATGCTGCTTATTGGGTAGCCGAAAAAGATGGAAAAATATTGGGCGGCTGTGGTATCGCTCCTTTTAACGTTGATGAGAGGATCTGTGAGCTTCAAAAGCTTTATTTGATACCAGAAGC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 192500-193003 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFUC010000001.1 Enterococcus sp. S23 NODE_1_length_650485_cov_41.467251, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 192500 33 100.0 35 ................................. AATGTTTCTAAAACATTACCTTGTGTAAATGTCAT 192568 33 100.0 33 ................................. TCAAATATCCGATGATGTACCTACTCCATATAA 192634 33 100.0 36 ................................. ATAGACAAAAATACCTACTTATGGAGAATGTTAAAA 192703 33 100.0 35 ................................. AGTGAACCTTACTCGCTAGAAAAGCATATTGTGAG 192771 33 100.0 34 ................................. AGACAAAGCAATTGAGTATATAGCTTTTATCAAC 192838 33 100.0 34 ................................. TACTGCAGATACGACTGGCGATAGTATGGAAGGC 192905 33 100.0 33 ................................. AATAAATTAGAAGCGCAAGACATGAATAAATTA 192971 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 100.0 34 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : AACGATTTGATTTCCTGCAAAAATCACGGGTAAAAGAAGAACAACAGTTATCTCTTGAATTTGAAGAACCACTTTTGGTCGCAGAAGAAAATTCAGAGATTTTTGAAGAGTATCCCCAAGTTGTTTGGCAAAAGCGAAATTTGGGAGAAGTCGTTCATGTTTTTAGCCATTTAAAATGGCATATCTTGGTGTTTTATGGAAGACAAACAGGTCCAATTTCTATCAATGACAATCAGAATTGGACAACTCCAGAAGAATTTTCAAACTATGTATTTCCAAAGCCGCAGCAAAAAATGGTAGAACTTTATCAAAAAGAATTTAAAATAAAGAAATAATTAGTTGGTGCGAACCTTAAGTGCGCATGAAATAGCTAGGAGATTCGCACCAAAATTTTTTAAGATTTCAGCTGTAAAAGGCTATTTTCTCATTTATATTTAATGTTATAATAGTGTTAGTAGTGGAATAGCTGGAATATGTCTGATATTTCAGCCTATTTCACA # Right flank : TATAGAATCATTGTTCAACGGCTAATAAACGTTAATGTCTAGCTCTATTTAGAGCTGGATTTTTTATTATGAAATATAATAAACTAAAAGTTATTTAAACGTACTTTATAGTATTTCATTTAAAACAGTCGTAAGAAATCAAACTCCTTAGTATGCAAAGTTGAAAATTATGATATAATTATAGTGATATCGGTGTAATGAACACCCAAACGAAGCGCAATCAGCTTTGATATGCGATTTTTCGTACGAGGGAAAGTTGGGGGACTATGGCAATTCCAAAAGAAGGTGAATTTGTAACGATCCAAAGTTACAAACACGATGGACATTTGCATCGAACATGGCGAGATACTATGGTATTGAAAACAAGCGAGTATTCTTTGATCGGCGTTAACGATCATACTTTGGTGACAGAGTCTGATGGGCGTCGATGGGTTACTCGGGAACCAGCGATTGTTTATTTTCATAAAAAATACTGGTTCAACATAATAGCGATGATCAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 527670-528311 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFUC010000001.1 Enterococcus sp. S23 NODE_1_length_650485_cov_41.467251, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 527670 33 100.0 36 ................................. ATTATTACCAGTAACGATCATATCAAAAAGATCATA 527739 33 100.0 33 ................................. TGACCCAATAAAACAGTTGGGATTCAGTAGAAA 527805 33 100.0 34 ................................. ATTTATTGAATTGCCGGAACAAATTGCTCTCGAT 527872 33 100.0 33 ................................. AAACGTGCTGCGCTGCTCCTCTTTTTCCTTCGT 527938 33 100.0 35 ................................. TCCTTCTTAGATTTGTCTGTTAAACGCTCTATAAC 528006 33 100.0 35 ................................. GTATAATAATGGTACATTAAAAGGACGGTGTTTAT 528074 33 100.0 36 ................................. TCTGCACCACTCATCACAATCAACATTGTTTTAAGA 528143 33 100.0 35 ................................. ATCATTACTGATCAGCTCCAATGATTCCACTTTTT 528211 33 100.0 35 ................................. AGTACTTTGTCCAATGATCGACTAGGGATCTTCAA 528279 33 78.8 0 ......................AC.T..CTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 97.9 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : ACACGAAATATGGTGATGGTGGAGCAGATATCTTACCATTGTTCCGTTTGAACAAGCGACAAGGCAAAGCTCTGTTGAAAGAATTAGGTGCGCCAGCAGAACTTTATTTAAAAATCCCAACTGCAGATCTAGAAGACGATAAGCCGTTAGTAGCGGATGAAGTCGCTTTAGGTGTGACTTACGATGACATTGATGATTATGTGGAAGGCAAAGAGGTTTCTGCAAAAGCTAAAGAGACGATCGAGAACTGGTATAAAAAAACGCAACACAAACGCCATATGCCAATTACGATTTTTGATGATTTTTGGAAATAATAGTACATTGTAGTTTGTTTCGTGTTTGGTGCGAATCATAAGTGCACATGAAATCACTGAGCGATTCGCACCAAAAAATCGAGATAAATGGGTTGTAATTGCTCTTTTTCTCATGGGAATTTAATGTGAGAGGAGAATTTAAGGTGAATAATAGCGGATATGTAATGTATTTCTGCTTTATTCACA # Right flank : TTTATGTTTATATATTATCTCAATTTTTTGAGTAGAAACTTCTCATGCATTCTCCTTATTTTTATGTTAAAGATTCCGGGAAATGAGATCTTAGTACTCCAACGTTTTTCTCCATTGAAGGACATCTGATTTTACTTTTATCAAAAACTATAGAGAGAAAAACATTTACAGATATTTTAATCAAGGCATCTGAAGTAGATTAACCCTAAATCTCAAAAAGTAGCTATCTTATAACGTATTATGGCACTTTCTACAAAAGTGTCCCGCTGAAACGAGAAAAATAGAAAGCTCGATTTATCGAAGTTTCTATCTTGTTATGGCAATAGACCAATGATCATTAGTATTCTTGATTTCTGAAAGTATTTAGGTTCAGAATATTTATCACGATAGATAACCATGCGAATTAAGTAATCCGTAAAAAGTTTCACTGCCAATAGAGTGAGGCTTTTTTTAGTTTCTATTTATTAATAACAAGAAATGAGATAAATAGTGGGAGCTGG # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //