Array 1 59863-60748 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABPVE010000001.1 Campylobacter concisus isolate B38_Tiny-mucoid, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 59863 30 100.0 37 .............................. GTAGTTTCAACAACATCAACATCAATAACGCTATTAT 59930 30 100.0 36 .............................. ATCCTCGAGGATATCCTTTCTCAAAGTTCATCATTG 59996 30 100.0 36 .............................. AAACTGCCATTGATGATAGCTTTAGTTTTGTTAATG 60062 30 100.0 35 .............................. AAAGTAATATTTCGATATTCTAAGGCAGATAAACT 60127 30 100.0 36 .............................. AGTTTTTTTCAGGATATGAGTAAAATTGCGGACGAG 60193 30 100.0 36 .............................. GCTTTCCACTCGTTTTCTTCGCCCTCGAGCAAAGAG 60259 30 100.0 36 .............................. TATGAATAAAATCGTCTTCACGTCCAAGCGCTGCAA 60325 30 100.0 36 .............................. ATAATCCCAGTGGCTACGTGATGAAATATATTCAAA 60391 30 100.0 36 .............................. GCGTGATCGTGCTTAGGATATACTCATCATCGTATA 60457 30 100.0 35 .............................. ATAGCATTAATAGGCAAAGGGATCATAAATCCGCC 60522 30 100.0 35 .............................. GCTCTTTATGCTTTGGATTAATTTCACTTTCTTTT 60587 30 100.0 37 .............................. ATAGCGTAAGCTCGGTCTTTTATATAGGTTTTTTGAA 60654 30 100.0 35 .............................. GGCATCGTGTTGATGAAGATCCAAATAAAGATAAA 60719 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 37 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACATGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCACGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAGGCAAACAAGCTTAAAAAGTGTATCTGCGAGGATGCGCCTTATGAAGGCTTTAGGTGGGAGTGAAATCACATTTTAATAAAGCGTTTTTTAAGATTTTAAAATGCTTGAAATTTAGGGCTTGGTGTATTTACACATAGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACCTAAAGGCCTATAAATCAGCTTTTTGGTGCT # Right flank : CAACGCATAAGCGACAAATTTAAAAGTCAAAAATTTTCAAAAAAGAGATTTAAAATAATAGATCAAATAAATAATAGTTGCTATCTTGCAAAGATGTATCAAACGAACGATAATATTGTTTTATATAGATACTTCAAAAAGCCAAAACCCCAGCCAATACAGCAAAAAAACAAGCTAGAAATAATAATGAAATAGACTAAGCATAAACCAGCTTAATATCAAGAGCATTCACAACCTTAAATATACTTTCAAATCTAGGCTTTGAATTCTCTTTAAACATCTTATAAAAGCTTTCTCTATTTAAATTTGCTTTCTTTGCAACGTTTTCAATGCCTTTTGACTTTGCTATATAAAATAATGCTCTTTTAAATTCTTCAATATCGCCATCAGCTAAGACTTGATTTAAATACTCTTTTCTTAATTCATCAGTTGTTAAGTAGTCTTCTAAATTAAATTTTGTAAATTCTTCTTTCATCTATAATCCTTTAATATCTCTTTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //