Array 1 79148-78820 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUWT010000021.1 Vibrio sp. S9_S30 contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 79147 28 100.0 32 ............................ ATTTGCTTGACTGCTGAAACGCTCTCAGAGCT 79087 28 100.0 32 ............................ TTTGATTGGGGCTCAGCACTATTTGTGTTGGA 79027 28 100.0 32 ............................ AATGGATTCGGCCATTTCCTTGGTGGTGCCCA 78967 28 100.0 32 ............................ AAACAGGTCTCGCAGCCGCGCCCGCCAGTTTT 78907 28 100.0 32 ............................ GTCAGGGTGGTCTGTTCTTACTGCTATTTTTT 78847 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : AGTTTACTGAATGACCTCCAAGGGTTGGAATGGTTGGGAGCACTGAGTGGTTATTGCCAAGTAAGCCACGTATTAGCGGTGCCAGAACAAACTCAATATCGCGTCATTTCCGAGAAAAGAAGCAATATGAGTAAGGCGAAGCTCAGGCGATTAGTCGCGAGAGGTACGATAGATCAGGAGGGGGAAAAACGCTACAAGGTTAAAATGTTAAGCCAAAGCTTTGATAACCCTTATTTAGATTTGCGTAGTAGCTCAACCAAACAAATCTATCGGAAATTTTTTGAGTTTAGTGACATTAAAGAGAAACCGAGCGATGGCATTTTTGATGTTTATGGTTTAAGCCGGAAGGCAACAATACCTTGGTTCTAACCCTATTTTTTTTGCTCTTTAAAAATAAACATATAAAACAGTGAGTTACAGTTAGTCTGTTTTTATAAGGTTAAAACTTGGTTTTTAATCTAACAGCTTGTTGTAACTTATTTTTCTAATGATATTCTATT # Right flank : ACAGCCCGACATACCACACACCCACGTGTGATGTTCACTGCCCTATCTCTCTATAGTCGGAGCACTTATACACCCGAAAGATCTCGTAGAGCATTGTTATTGAACTGGGTCCGTTAAGCGATGGCGTTTTCATTCTACGAAAAGCCGCCGTGATGAAATGGAGGTGAATGCAGAAGGGCATTGGGTTTGCAAAATGGTCGAATACTTATTCGTGGGGCGTTGCTTGGTCATGAGATGATTCGTGAGCCTGCTAAGAATTGAATTGACGATGAAAGGATTGGTGCCCGTATTGACGTATACCCTGCATTCCGTTATCTACCACATACTATAAAGACAAATATCAACCCAAAAGGCTCAGATCTTTCATTGAATTCATAAACAGCAAGTTTGATGTAGGTTAAGCGCCGTGCCGATTTACACTGGCGCTTTGGTTATTTCCAATTAGTATTGGTAAACCAATACTTCACCCTCTAAAGCCATTGGCACCATAAGCGTTTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 37753-37365 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUWT010000006.1 Vibrio sp. S9_S30 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37752 28 100.0 32 ............................ TTGGGATATCAATGATTGCCTTGTGCGCTCAA 37692 28 100.0 32 ............................ TTCAATGTAAACCTTAACTGAATACTCTTTAG 37632 28 100.0 32 ............................ TTAACCGCAATCGGCGCTGTGTAAATTGGATG 37572 28 100.0 32 ............................ TTTTTCACCCACCTTCATATCTCTTTCCTCTT 37512 28 100.0 32 ............................ TGCAATTGGGTAGTTGTGCCAAGATGTGCTGA 37452 28 100.0 32 ............................ TGAAATACCAACGGGCAGAATTGAAAAATAGC 37392 28 78.6 0 .....................CATC.CT | ========== ====== ====== ====== ============================ ================================ ================== 7 28 96.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAAAATCTGTGGATTGATATGAGCTCAGTTCATCATTCTCACCATTGACACGCACTTGTCGGAATCTCATTTTTGATCGCCTCTCCCCGCGGCCGAAATCATCACATTTCCGCTGCATTTGAAGATCAAGATCACACATTGAACAAAACAATAACGGCTCGCTTTTCAGCCTAATTGGTATTTTGCCCGTATTAAAATAGCCGTTAGAAAAACGGCAATGGATCGCCCGCCACACAGGTGAAGTGTTTACCTCTCATCTTTAGTACCTCGCTCCATTGGGCTGCCCGCCCCCATTAGGGGCAAAGTATCTCCCCAGCAACGCAATCACACCGTATATAAGCGGGATAGACAAGAGCCACCGTTAACTCCCCCTATTTTTTAACCAAACAAAAAATAACATTAAAAGCAAACAGTTAAATAGATCGCATTTTTATATGGTCAAAACTGGATTTTTGCACTTTAGTGCTTGTTGTTTCTGGCATTTTTCGGCAATATTCACC # Right flank : CCATCGTGTATTTCCACGGCGATTCGAATTGTTTGACCGTATGGGAAGCGCGGTATGCCTGATGCAGCAAGTCGGCGGCGGCGATTTGCTCATCCGTGAGTGTCTCCTTCACGGCTAATTCTTCTTTTTCAATTCGTTTGCGCGTTCCGCTTAACTTGTCAGACCCTATCGCATCCAAGTAATTTTGGTAGTAGCTGTAAGACTTCACCAAATCGGCTTCTACTCTGGTTTTTGGGTAGCGACCGGCGTAAGCCTTAGCAAGTAACACGAGCGATGTGGCATCGCCTTGTTCTACGGCGCTTTCCATCCAACTGACCGCTTCATGGGTTTTGTCGGTATCAATCAATAACTGAATCGTCTTTTTTATGGCAGGGAGATACCCCAATTGGGCAAGCTGCGCATACCGTTTTTTCACTTCCAGCATCCGATTGCCCGGTAACACAAACCACTCTTCAAAGCCCAGTTCTAGCAACTCAATTTCAGCGTATTGGGCGGGCAAA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //