Array 1 92606-92845 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMAB010000035.1 Methanobrevibacter oralis isolate MGYG-HGUT-02162, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 92606 30 100.0 39 .............................. TGTAGTATTGTAGGTAATTTTACTAATAATATTGCTGAT 92675 30 100.0 39 .............................. TGTAGTATTGTAGGTAATTTTACTAATAATATTGCTGAT 92744 30 93.3 42 ................A....T........ ATGGTTATTCAAGGTGATTTTATTAATAATACTGCTTTTAAA 92816 30 93.3 0 ................A....T........ | ========== ====== ====== ====== ============================== ========================================== ================== 4 30 96.7 40 TATGGTGGTGCTTTGTTTAATGCTGGGAAT # Left flank : ATAATGATGGAGGTAATATTACTATTGACGGTGATTTTATTAATAACACTGCTTTTTATAGTTATGGTGCAATCTATAGTAATGGAGGTTATATTACTATCAATGGTGATTTTATTAATAACACTGCAATTACTAATTCTGTTGGCGCTATATGTGCCGATAGTTGTAATGTGAATGTTATTGGTGATTTTATAGGTAATGTTGCTGGACATTATGGGGCAATTTATATTGAAAGATGTAATTTGTCAATTAAAGGTAATTTTATAAGAAACAATGTAACATGGAATGGTGGTGTTGGCTATATTTCTAAAACTAATGCTACTATGATAGGTGATTTTATTAATAATACAGCTGGAATGATGTTTAGTCTGTTTATTAATGAAATTGGAAGTAATACAACAATTATTGGTAATTTTATGAATAATACAGCGGAACGGTTTGGTATTGCTAATAAAGGTTATATAAATGTTAAAGGTAATTTTACTAATAATATTGCTGAT # Right flank : TATGGTTATTCAAGGTGATTTTATTAATAATACAGCTAATGAATATGGTGGTGCAATATTTGTGGATGGTAATTTAAATTGTTCTTACGGAATATTTTACAGAAATTTTGCAAATAACACAAACAGCACAGTATTTATTTATTCTGGTAATGTAGATTTATCTTATAATTTTTGGGGATGTAATAATCCTAATTTTACAGATTTAATTAATTCTAGTAATAATTATACAATGGATAATTTTTTCCAAGTATTATTAAAATGTGATGTAATGAACAGCACTTTAACGATTGGTGATGAATTACATTATTATGTAGATTTAAAATTAAATACTAGTGGCCCGTTTGATTTAGGAAAATTATCTCCAATAAATGTGAATTTAAGAGATAATGTGAATGCTATTTTAGATGAATTTATAGTACAAAATAACACTGCACCAAATTCAAGAAATACTACTGTTAATAATAATCTAAATTATTATAATTTATATTTCTATGATAATT # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATGGTGGTGCTTTGTTTAATGCTGGGAAT # Alternate repeat : TATGGTGGTGCTTTGTATAATTCTGGGAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 1958-396 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMAB010000054.1 Methanobrevibacter oralis isolate MGYG-HGUT-02162, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================== ================== 1957 34 100.0 39 .................................. AGCTGATGAAGCTAGAATTGCTGAATTAGCGATAGATAA 1884 34 100.0 38 .................................. AGCACTTTATTATTTGATTCATTTTTTAATGAATTCGA 1812 34 100.0 38 .................................. AGCCCCATCAACCTCCAAGTTTCCCTAGGAGTCAACCG 1740 34 100.0 39 .................................. AGCATTTTTTGCTAATAGTCATAACCATTTGGTTTTAAA 1667 34 100.0 39 .................................. AGCTTGGCGACTTCTTCCTCGCTTAATTTTCCTACTATT 1594 34 100.0 38 .................................. AGCTCCTTGCTATTCATTTTTTCACCAACTACGCGGGG 1522 34 100.0 39 .................................. AGCTGAGGCGACAGGCGAGAAAAATAAACCCCATTTAAA 1449 34 100.0 39 .................................. AGCATGTCCAGTCTCAGATGGTCAACTGCAGAAATTTTT 1376 34 100.0 40 .................................. AGCCTTATCAGCGCATGTAATACCGTATTCGGCTAAAGAG 1302 34 100.0 39 .................................. AGCCCCCTTTCTTCTCTTCTATTCTTCTGTTCCTCCAGG 1229 34 100.0 39 .................................. GGCCCTTAAATTCCTTATTATTCGTTTTTTTCACCAACT 1156 34 100.0 38 .................................. GGCTTTATAGTGAAGAATATATAAGATTGGTTAATTTA 1084 34 100.0 39 .................................. GGCAATAAATAGGTTTTTGTTGTATATATATATTGCTAT 1011 34 100.0 38 .................................. GGTTAAAGTCTTTTAATAGCTTTTTTGAGGGTTTTGAG 939 34 100.0 38 .................................. GGTGATGAATAAGATAATAAAATTTTCAAATTCTCTTT 867 34 100.0 39 .................................. GGCCTAGAAGACGATATAGAATAACTAACTCAAACCCAA 794 34 100.0 39 .................................. GGCTAATAAACCGATAATGAACCCTAAACTAGAATTGTT 721 34 100.0 39 .................................. GGCAAAATCCATTGACTGTTAATATCTGTTCCTAATTCG 648 34 100.0 40 .................................. GGCAGGAATAGGTTGGGATTTGGTTTTAACTGACATTCCT 574 34 100.0 37 .................................. GGCCCCTATGGAGGACATCCTCCACACACACCATCAC 503 34 100.0 40 .................................. GGAATCTTAGCAATATGTTTATCATAAACTTGTTAAAAAC 429 34 76.5 0 ........AC..............T.GAT..AA. | ========== ====== ====== ====== ================================== ======================================== ================== 22 34 98.9 39 ATTGCAAAGTTAATTCCATAAAAACAAGGATTGT # Left flank : AAGGTAAAATTTTTATCAAAGAACCATGTAGAAAATTACTGATTAAAACAGTTCTTGATAAACTTAACAATGAAATTACATTTGAAGGATATAAAAATAACTATTCTAATTTTATAGCTATTGAATCACAACATATTGTGGAATTTTTACTTTACAATAAACAGTATAAGACGTTTTATCTAAGATGGTAAAATTGCGTAAACCTCAAAATATTTACTTAACAATAAAATTTTGTTAATTTTTACCTAAAATTTATTTTTAATAATTCTTTTTTAATTAATTAATTGTATATACTTTGGAATTATATTACTTGTTTTAGGTAAAATTTGTTGTTGATTTTATTTTTTAGCTATTTTTTAATAAAATTTTAATTAGAAACTTATTTATAGTACGCGTGCATATCTTTATATAGACTTTTACTTTTTTTATTTGCACATGAAAGTCTAAAATCACAGAGATTTGTGGTAGCTATTGTCTGAAATGATAGGATTTTCGACGCT # Right flank : TACTCATTAAATCAGTTTATATAATTTAAATTAAATGGGTAATGTTATCATAGTAAAAGATTTTTCTAATTCAAAGGGGTTTGTCAATAAATCCATTTTTCGTAATTTTTCTTGTTTCTTCTATTTTTAAGTTAATTTGGTTTTGGTTTTATTTTAGAGTTCTTTGGTTCTTTTATTTTTTTACATGTTTTTGATTGTTTTCAATCGTAATTTTTATTAAATTTGAATTTCAAAAATTAAATTGAACTTCCATTCTTTGGATTTCTATGTTTCATTCAAAAATGGTCGTTTATGATACGGCGTACAGTCTATCTTAATGATGGATTATTGGGCTCTTTCTTGCATTCTTCGCTCAATATGCTGTGTCTTTAAGATTAATTAGTCTTGTAAGGTTGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAAAGTTAATTCCATAAAAACAAGGATTGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 50436-48189 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMAB010000008.1 Methanobrevibacter oralis isolate MGYG-HGUT-02162, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 50435 30 100.0 34 .............................. GTGTAATGCATCACATATTCACTATCCATGTCAA 50371 30 100.0 36 .............................. ATACTAAATCCAGCAGTATCGAGTTTAAATATAGCA 50305 30 100.0 36 .............................. TAAGATAATTAAAATTAAATTAACGAATAACAATAC 50239 30 100.0 36 .............................. GATTATTATAGAGCATCAATGAAAAAATATGCTACA 50173 30 100.0 37 .............................. AATAATGTTATTAAGATTGTAACTAACCATTTTAAGA 50106 30 100.0 36 .............................. TTCCTTTGTAAGTTCATGTTCAACTTTATTTTCATC 50040 30 100.0 36 .............................. TTATTGACCATCTCTTACATATTTTAATTTTCTTAA 49974 30 100.0 36 .............................. ATGTATATCAAGAGGCAACTATTGGACAATTCACAT 49908 30 100.0 36 .............................. TTGCTTAAACATGCAAATAAATAATCAAACAATTGA 49842 30 100.0 36 .............................. TAAACCAAGAAAAAACAAACACCCCCAAAAAACACT 49776 30 100.0 36 .............................. CAACATAGTATAGATGATAAATATACTTATAATCAA 49710 30 100.0 37 .............................. AATTTAGATGGGACACATGGAGCAAGGTATAAATATT 49643 30 100.0 35 .............................. GATTGCTCAACACAAGACCCAGCGACAGCAAAAAA 49578 30 100.0 37 .............................. GGGCGTATCCTAGGATTTTTATCCCCCGGTAATAATA 49511 30 100.0 34 .............................. CAAAAAAGGAAAGTAGGTATGTTAAGACCTTCAA 49447 30 100.0 38 .............................. TAAAACTCATGAGTATTAATTTTGCCGGAACCTTTAAT 49379 30 100.0 36 .............................. TTATTGACCATCTCTTACATATTTTAATTTTCTTAA 49313 30 100.0 36 .............................. ATGTATATCAAGAGGCAACTATTGGACAATTCACAT 49247 30 100.0 36 .............................. TTGCTTAAACATGCAAATAAATAATCAAACAATTGA 49181 30 90.0 32 ...........................TGA CTGGTTATTAAGTTGGGCGTCATCTGAAACAT 49119 30 100.0 35 .............................. CTACACATTTCAAAAACAAAAAGCCACATAAGGGG 49054 30 100.0 37 .............................. CCCAATACTCGAAAAGATATCGATATACAAATAGAAA 48987 30 100.0 37 .............................. TAACTATAACCAGGTGGTGACGATGAAATCACAAGTA 48920 30 100.0 36 .............................. ATTGATTATAGCCTAGACACAAAACAAAGTAGAACA 48854 30 100.0 39 .............................. GATAAATCCTATCAATATTCTCTGATTTAAGAAAGTGCA 48785 30 100.0 38 .............................. CAGTGGAATAGGTGTAGTCTATTCCATCCTCACTCCCT 48717 30 100.0 36 .............................. TGCTGTACTTGTTGCAAGACAAATACGAGGTGTGAT 48651 30 100.0 37 .............................. AGCCTTGGTAAGCCTAGTAAGAAGAAGAGTGAGGATG 48584 30 100.0 37 .............................. GGATTATATTTAAAAAAAGAAATATTCTAACCTAATA 48517 30 100.0 37 .............................. CCTCAAGAGTGTTATTCACATTCTTCACCTTCTATAA 48450 30 100.0 35 .............................. CAATTCATCATCAGTAATAATCACATCATTACCAG 48385 30 100.0 37 .............................. ACACTCAACAAACCTTGCAACTGTACAGCTGTAACCT 48318 30 100.0 36 .............................. TAAATTTTCCCATCAATTTCAAGAAAAACATTGCTT 48252 30 96.7 5 ..................G........... CATGG Deletion [48218] 48217 29 73.3 0 ........T..-...TAA...TT..A.... | ========== ====== ====== ====== ============================== ======================================= ================== 35 30 98.9 35 ATGTTAATCAGACCAATTTGGGATTGAAAT # Left flank : ATATCTTCACCTGATGATTATTTAATTAAAAGTTTGGTCAATGGATTTTTAGAAACATTAGAAGTAAACTTAAATGGGCAAAAATTATTGGTTGAAAAAATTGAACTATTAAAAGAACCTAATTTTACACATAAAATGGAATTTAAGACGTTATCTCCAATAATAGCTAGAACTAAAAGGGAAATTGATGGAAACTTAAAAGAATGGGATTTAACTCCTGGAGATGAATTTTTTAAAGCTTTAGAGAAAAATCTTATAAAAAAATATAAAAAATATAATGAAATTGAGGAAACAGATAAAGAAATAAAAATTTATTCTGAGATGAAAAATGTTAAAAGAAAAAGAATAGCTATTGTTAAAGGACCTCAAACAACATACCATAGAGCATTTATGATGGATTTAATTCTTGAAGGTGATTTAAATTTGATTAAATTTGCTTATGATTGTGGATTTGGAGAAAAAAATAGTATAAGAGCCATAATAGCTGCTATTACTGCTGC # Right flank : AAAAAATAAAATTGGGAATAATTTTTATTCCCTTTCTTTTTTAAGTGATTGAACCATGTCAATCTTTTTAAGTTTTCTTGTTAATAGGTAATTAACAATTAATGACAGCACTATAGTTAAAATAAAGCTTAATATTATAGTTCTTGCAGTATAATGTGTTGGGTAGAAGAATGTATCACCAACGGTATCCCACATGAAGTCTAGAACTGCATATCCTGTTGGTACACCAAGTACATATCCAACAATAGATAATGCTAGGTTTTGTGTTAAGAATAGCTTTTGTAGGTTTTTAGTTTTAAAACCAAGTACCTTTAATGTTGCCATGTCTCGCTCAACTTCGGTAAATCCGAGAATTCCTAAACTATACAGTACAACTATTGATAAAACAATTGCAAATATTAATAATGCTCCAACCATTAAATTGGCAGTTTCTGTTAAATCATCCCAACTTTTTACCAAATCGTTTATGGAATTTGCACTAGCTACACCAGTTAAATTTT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTAATCAGACCAATTTGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //