Array 1 18818-9003 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAJN01000027.1 Paucibacter sp. KBW04 KBW4_TGACCA_contig_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18817 28 100.0 32 ............................ ACAAGCAAGATCCGCCGCGCCACCCGGCAGAC 18757 28 100.0 32 ............................ TTCACCAATCGCTGGTTTCGCACCGCGCCCAA 18697 28 100.0 32 ............................ TCAACGGCTGGGTCTTCAATAGCTTCCAGCAT 18637 28 100.0 32 ............................ TTCTTTCGTGGCCGCTGGTTTTCTGCCTGAAG 18577 28 100.0 32 ............................ GCACGTAGCGCTCCAGCGCATCGGCCAGCGTC 18517 28 100.0 32 ............................ TGTCCACGGTGGGCCTTGTTGCCCCGACTGTG 18457 28 100.0 32 ............................ TTTTTGTAGCGAGTGGTTTCAAAGCCCGCTGC 18397 28 100.0 32 ............................ TCCAACTTGCCGCTGGCGTTTTGGGTGCCAAC 18337 28 100.0 31 ............................ TGCCGGGCAACTATGCGCGCCAGGGCCAGCG 18278 28 100.0 32 ............................ TGTACCGATGCCGTAGTTGTCAGCAGCCGATG C [18277] 18217 28 100.0 32 ............................ TATTCAGCGAAGGCGGCGCGGGCATCGCGCTC 18157 28 100.0 32 ............................ TGTCAGGCCCCGCCCAGATCGCAGCGCAGCGC 18097 28 100.0 31 ............................ TGAGGCACTGCTTACGGAATCCATCCACCAT 18037 28 100.0 32 ............................ TGCTACAACTACTTCACTTCAGATTCGAAAGT 17977 28 100.0 32 ............................ GCAAACAAGCACCTTCGGGTGCTTTTTTTACG 17917 28 100.0 32 ............................ GTCAATGGTCAGCCAGCACATCAAGGGGCGTC 17857 28 100.0 32 ............................ TTGTTGCCGCCAATAGCGCCCAGGCCTGCCCC 17797 28 100.0 32 ............................ TGTTTGATCCCCTCAAAGCGTTTTGCCAGCTC 17737 28 100.0 32 ............................ AAACCAGCATCCGCGCCTACGCCCTGGCTGAT 17677 28 100.0 32 ............................ TTTTCGCCGACGCTGGCCAGATCGTGCTCAAG 17617 28 100.0 32 ............................ ATCACGCCCCAGGATTGGCCCGGCTTGGTTTT 17557 28 100.0 31 ............................ GGTTGATGCGGCCCCCGTGCCTACGCCTTCG 17498 28 100.0 32 ............................ GGCAACAACGGCGGCAAGATCAAACGAATTTG C [17497] 17437 28 100.0 32 ............................ AACTCGGACAGCTACGCGCTGGCTTCGGCATG 17377 28 100.0 32 ............................ TTGCTGAGGGCCACCAGGCCCTTGTTGCTGCA 17317 28 100.0 32 ............................ CCCAGCTCGGTCAGCAGAGTCTTGTAGACCTC 17257 28 100.0 32 ............................ TGTACAGATGGCCGATGGGTGTCCAGGCGCCG 17197 28 100.0 32 ............................ TCTTGGCCCAGGGCGCTGAGGTCGGCGGGGTC 17137 28 100.0 33 ............................ AGCAGAGCGCCGCCCTGGCCGCTGCCCGCGAGC 17076 28 100.0 32 ............................ TGGGTCTGCCAAAGCGCACCCCCCTATCCTGA 17016 28 100.0 32 ............................ TTTGATGCGGCCGTGGTGGTGGTACGGCGTTT 16956 28 100.0 31 ............................ AGTGAACAACGTCAAAGGTGCAGGAGCAGCG 16897 28 100.0 32 ............................ TCTTCCGAGATCAGCAGCGAGTTCACGCGCTG C [16895] 16836 28 100.0 32 ............................ AAACAAAAACTCCAAAGGCAAGACCACCATGA 16776 28 100.0 33 ............................ AGGTAGCGGTCGGTGATGCGCTGGCGGAAGGTC 16715 28 100.0 32 ............................ GAGCAATAACGTGGGTCTTCCCGCCACCTGTC 16655 28 100.0 32 ............................ ATCGGCCCGGATTCGTCGGCCCAAGAATTCAG 16595 28 100.0 31 ............................ GCTGATCTTGGGCACATAGGCCAGCACCGCG 16536 28 100.0 31 ............................ AAGATGCTCACGCTGCGAGGCAGCAGCAGCG T [16534] 16476 28 100.0 32 ............................ TTCACCGGGTCTGAAGTTCTCGGTGTTGGCAT T [16475] 16415 28 100.0 32 ............................ TACAACACCGCCGCCTTCTTGTTCACCAACCC 16355 28 100.0 32 ............................ ACCCGCGGCAGGATCGACCCTGCGGCCGCTCT 16295 28 100.0 31 ............................ TTGCTGGCATACATCCGGGCCCGAGGCTTCG 16236 28 100.0 32 ............................ ACTCGCTACCAACACCGGAGTGAACGGGATGA T [16234] 16175 28 100.0 32 ............................ AGGTCTCGCCATAGATGATTTGCCAGGGCGCG 16115 28 100.0 33 ............................ ACAAAGGGCAGCACCTGGGGCATGGCCAGCCAT 16054 28 100.0 32 ............................ GGAAGAACGCGAACCCAGGTGCGCCGGGGGCT 15994 28 100.0 33 ............................ AGATGGTGTGCCTGCTGCCCCAGGGGAGTACCT 15933 28 100.0 32 ............................ TGCAGCCCCGCAGTGGCAAAGCTGGCGCCGAG 15873 28 100.0 32 ............................ GGGAAACCATTGGCCCGTCATGGGGAAAAGGC 15813 28 100.0 32 ............................ TGCTGAACACGCCTAGGGCGATCTTTTGCTTT 15752 28 92.9 32 ...................A..G..... TTCCCCTGCGCCTACCCCCAAGCCGCCCACGG 15692 28 100.0 32 ............................ TTGAACATCTGGGAGTATTCCTTGTGGGTGGT 15632 28 100.0 32 ............................ TGAAGCTTGCGACCCACAGCTCCAGGGAGACT 15572 28 100.0 32 ............................ TCTCAAAGCCGAGTATTTCAACGCCATCAAGA 15512 28 100.0 31 ............................ TATCGCCGCACCGGAGACCCCGCCAGCACCG 15453 28 100.0 32 ............................ TATCTGTCAGGGCTGTCCCCAGGCTATGCGGA A [15452] 15392 28 100.0 32 ............................ AGACCTCCAGGCCTGCGCTGCCGGCCGCCAGC 15332 28 100.0 32 ............................ TCAAGAATCGCTGCGCCCACCAATGAACCCAG 15272 28 100.0 32 ............................ TTCCAGAGCCCCTTATTGAACTTGCACTCCCG 15212 28 100.0 32 ............................ TACTCGCGATCGGCGGGCAAGACACCGTCTAC 15152 28 100.0 32 ............................ GAAGAATGGCCACGTGCATGCTGGCACCCAGG 15092 28 100.0 32 ............................ CAGCGCAGCGGTGGCGGGCGCTCGGGCTTTCG 15032 28 100.0 32 ............................ AATTACGTGGAGATCAATGATGCGACGGATTG 14972 28 100.0 32 ............................ ACACCGTCCTCGGTCACAAAAGCGGCATTGCT 14912 28 100.0 32 ............................ GTCACGCCGACCGTCCATTTGCAACGGCTGCG 14852 28 100.0 32 ............................ TACATCACCTGTATGAGCAGCAGCACACAAGG 14792 28 100.0 32 ............................ TACTCTGAAGCCGGTTACCTGTGGGACGAAGA 14732 28 100.0 31 ............................ TGTGCGTGCGCCGCCCACTGCCTTGCCGCCG 14673 28 100.0 32 ............................ TCAACGCGTCGAAGCGGTGGGCGAAGAAGCTG C [14671] 14612 28 100.0 32 ............................ ATCCCGACACCGTGCGCCGCGCCCTTGGCAAG 14552 28 100.0 32 ............................ TCAACTTGCGGACGCGCTCTGCTCCAGCGCCT 14492 28 100.0 32 ............................ AGATGGTGTGCCTGTTGCCCCAGGGGAGTACC 14432 28 100.0 32 ............................ TGCACGGCTCGCTGGACGGTGTCGACGCTGAG 14372 28 100.0 32 ............................ TTCACATGCGCGGCTTCAAAGCCGCGCTCGGG 14312 28 100.0 32 ............................ CAGAACGTCGCGCAAGACCTGACCCGCGCCCG 14252 28 100.0 32 ............................ GCTTGAGGAACTGGGCAAAGGCCCAGGCCTCC 14192 28 100.0 32 ............................ TTCTTGATGCTGATCTCGGCCTCGTACTTTGT 14132 28 100.0 32 ............................ AGAAGGCACCCCAGCAGGCCGAGTGGCTGACA 14072 28 100.0 33 ............................ CTAAAGAGGTTCAACCAGCCCCCTGTTATCCAC 14011 28 100.0 32 ............................ TCGGCCATCTGCACAATCAGCGCGTGCTGCTG 13951 28 100.0 32 ............................ AGTTGCGGGAAGTCCTTAATGGCAATCCTATG 13891 28 100.0 32 ............................ TTGACGGCACTGTTGACGCCCACACCGCTCTT 13831 28 100.0 32 ............................ AGAAGCGGCGCATGTAGACCTGATGGCCCTTA 13771 28 100.0 32 ............................ TTCCAACTGGCCCGCACGGTGGGCGGTTTTCT 13711 28 100.0 31 ............................ TGAACGCGGTAGCTCCAGCCGATGGGGCGCA 13651 28 96.4 32 ........................A... TTGGATCGGCGGCAAACGCCGCTTGGCAGACC 13591 28 100.0 32 ............................ TGGTAGCAATTGCCGATCCGGTTGCCCGTGAT 13531 28 100.0 32 ............................ TTGCTGGTCAGCCAATCACGCACAGCGCCCCA 13471 28 96.4 32 ......................T..... TTATGCCGCCATCGATAGCGTCACCGCTTGGT 13411 28 100.0 32 ............................ TGGCAGCCTTTGCCGGACTGGGGCTGGCATGT 13351 28 100.0 32 ............................ ACACAGCCATTTCCTCGCGCTGGATGGCCGCT 13291 28 100.0 32 ............................ ACAGCCAGGGATTTGCCTCCCAGCTGTCAGGG 13231 28 100.0 31 ............................ TGCTGGGCGTTCGGCAGGCACTCCCCGCGCC 13171 28 100.0 32 ............................ TGAAGGCCGCCGATGACCTGACCATGCTTGTG 13111 28 100.0 32 ............................ TTGCAGCAAAGGACTATCTCAAATGAGCACAC 13051 28 100.0 32 ............................ AAAAAGCCCGCATCGACGCCCTCAAGGCTCCC 12991 28 100.0 33 ............................ TTGCAAGCGGGCCACGCTCTTGAACCGCTTTTC 12930 28 100.0 32 ............................ TACCCGCAGGGCAATTGCATTGCCGATCGCGT 12870 28 100.0 31 ............................ AGGTACGTGGCCCGCGCGGCATCAGACATCG 12811 28 100.0 32 ............................ ACTACCCGACTGCTCAGATGTCGGGCGAAAGC A [12809] 12750 28 100.0 32 ............................ TGCATGGACGATGACGATCGGGAGAACATCCC 12690 28 96.4 32 ........T................... TGCCGGGCTCCGTACAGTTATTGACACGGGTC 12630 28 100.0 32 ............................ ATCTGCTTAGACGGCAGGCGCACGGGGTTAGC 12570 28 100.0 32 ............................ CGGTGGAAAACCTCGATATCCGCGTGACCACC 12510 28 100.0 32 ............................ GATGAGCATGGCTTGAGAAAAAGGGGCCGAAC 12450 28 100.0 32 ............................ TGCAAAGCCCCACAGTCGCCCGTGATCTGCTG 12390 28 100.0 32 ............................ TTGCGCGAGCAATGCGCAGGCGCCGGGCCTCT 12330 28 100.0 32 ............................ TTGAATTCGCGGACGCCGGCCAGGCCGCCGAC 12270 28 100.0 32 ............................ GCGACGACAAGGGCCAGATCGTCAAGAAGAAG 12210 28 96.4 32 .....T...................... GCGACGACAAGGGCCAGATCGTCAAGAAGAAG 12150 28 100.0 32 ............................ GCCCGCCTCAAGCCAGCCGGCCAAGTCCTTTT 12090 28 100.0 32 ............................ TGCCGCGCTGCAGGCCGACCCGTGGGCGGCCG 12030 28 100.0 32 ............................ TGACCCAGGTGGACTTGGCTCGCGCGGCCGGA 11970 28 100.0 32 ............................ ACCAGGGGCACCTTGTCAGCACGTTCGGTGCG 11910 28 100.0 32 ............................ TGGGTCGACTCGCCGGTCGCATGTTGATTGTT 11850 28 100.0 31 ............................ TTCAGGAACAAGGCGGCGCAACATCTGGGCG 11791 28 100.0 32 ............................ CCAACAGGCGCAACCGGTGAGTTTGCGGGCCG C [11788] 11730 28 100.0 32 ............................ TGGAGCGATAAGACCCTGCACGGCATTGCGGC 11670 28 100.0 32 ............................ TGCAACTACGGGCGCAAAGATCCGAACTCTGG 11610 28 100.0 32 ............................ TTCTCCGTCCTCGCCAACCGCGACTAGCGGGC 11550 28 100.0 32 ............................ ACATCAAGATTTATGCACCCTGGCAAGCCCTG 11490 28 96.4 32 .....................G...... AGTCTTTCGGCGTCTTGTCGATCTGCTTTGTT 11430 28 100.0 32 ............................ TACACCGCGGATACTTTCGACCAGCGCTACTA 11370 28 100.0 32 ............................ AGATAGATCGCGAACTCAAGTCCACCACAAAC 11310 28 100.0 31 ............................ TGCGAGGCAAGCAGTTCACCGATGTGCTGGA 11250 28 100.0 32 ............................ ACTCAATGGCGGCGTGTTCAATCAGCGTGCCT 11190 28 100.0 32 ............................ ATCAGCTGCCAGCGGCCATGCGAACGCTGCCG 11130 28 100.0 31 ............................ TGCACCGCACCCAGGCCTTCCTTCGTCTCCG 11071 28 100.0 32 ............................ CGCTTGGCCAGCGCGTTCTTCTTCAGCTGCAA C [11070] 11010 28 100.0 32 ............................ AGCTTGTCGGCATCACTCAGCGGCTCGGCCTG 10950 28 100.0 32 ............................ GTAGTGGTCAAAGGTTTCGCTGGTTTGGGCAA 10890 28 100.0 33 ............................ ACGAATACAAGGCTGACAAGCCCGAGGGCTACA 10829 28 100.0 32 ............................ ATTCATGCATTGATGCCACCACCCGCCCCACG 10769 28 96.4 32 ...............T............ GCATCTTCCCCGGTTGGTATGCGCCAGTGATG 10709 28 100.0 31 ............................ GGCACCGGCCAGCCTCGCGGTATTGCTGTCG 10650 28 100.0 32 ............................ TTCACCAGCTCGCCACGCTCCTGCATGCGGCT C [10648] 10589 28 100.0 31 ............................ CATAAGGGCCTGGCCAGCCACCATCAGCTCG 10530 28 96.4 32 ...............A............ GACGAGCAAGGCTCGGCATACATGGTTGACAT C [10527] 10469 28 100.0 32 ............................ TACGTCACGATCCCTGTGCCCTTCGGCTTCGG 10409 28 100.0 32 ............................ TCCTGCTGGATGCGAGTCAGACTAGCCAACAG 10349 28 96.4 32 .....A...................... AGATCCAGGCGGCACGGTTTGCACATGTGCCC 10289 28 96.4 32 ..................T......... TGCAGGCGCGCGGCCTTCTTGCTCAGGCGGCC 10229 28 100.0 32 ............................ TTGCTGGTGCTGCGCTTTCGGCGGGGCGTGCG 10169 28 100.0 31 ............................ TGAACAACCCGCGCCGCTTCGTCTCAGCAGC 10109 28 100.0 32 ............................ AAGATCAAGCGCTTTGTGCAACTCACCGGCAC 10049 28 100.0 31 ............................ ACCTACGCTGTCGCCAAACGCCTCCTCGGCG 9990 28 100.0 32 ............................ GAGATCGCACCCAAGACGCCGCCTCGGCCGCG C [9987] 9929 28 100.0 32 ............................ TACCCTCACGCCATGGAAATCGCGCTGGACCA 9869 28 100.0 32 ............................ AGCCCGAGCTTGTCAGCTTCATGGACAACGGA 9809 28 100.0 32 ............................ TCAATCGATCGAGCCACCGTGAGCACCGGGTC 9749 28 100.0 32 ............................ TTGAACGCCTTGGAGTATTCCTTGTGAGTGGT 9689 28 100.0 32 ............................ TCTCCAACATCACCAAGGCCTGACATGAGCAC 9629 28 100.0 32 ............................ TTCATCGACATCAAGAGCCGCTTCATCCCCGG 9569 28 100.0 32 ............................ AGCAAAGGTCACGCCTGCAACGTGCGCCACAA 9509 28 100.0 32 ............................ ACAGACGGGGCACTTGCAGCGGCCGATTTGCT 9449 28 100.0 31 ............................ GAGCTGGTCGACATTTCCGAAGTGATCACCG 9390 28 100.0 31 ............................ TCGTGAGTTGGTCCAACGGCTTGGCGTTGAT C [9388] 9329 28 100.0 32 ............................ TGGCCACGCCCATCCTGAAGCTGCCGCCCACC 9269 28 100.0 31 ............................ TGAAGATTGAAGAGTGGTGCCCCGCCCGGGC 9209 28 96.4 32 ........A................... TCTTCGATGCCATAGCGGTCGCGCGAGTCCAT 9149 28 96.4 32 G........................... TGATCGAGCGCAAGACCGTACCAGAGCTGGTG 9089 27 89.3 33 G..G....................-... GTCACCGAATCCTCAATCCTGTGGTCGCCCGAG 9029 27 89.3 0 G.......................-..C | ========== ====== ====== ====== ============================ ================================= ================== 164 28 99.6 32 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : CGCGCTGGCCCAGCTCATGGCGCAGTCTTGGCTGACTGGAATGCATGACCATGTGCGCGTGACTGCGAGTGCGCCGGTTCCCACGGCGGCATCGCATCGGTGGCTGACTCGGAAGCAGGCAAAAAGCAACCCTCAGCGCTTGCGTCGTCGGCAAATGAAGCGGCATGGCATCAGCGCCGATGAAGCGTTGGCGCGGGTGCCCGATACCGCTGCAGAGCAGCTTTACTTGCCCTTCGTGCAGATCCGCAGCGCCAGCACGGGTCAAAGCTTTAACCTGTTTCTGGCGCTGAGCGAACCTGTCGCTGAACCCAGCCTCGGTGAGTTCAATGCTTACGGCCTGAGCGCCAACGCCACCGTCCCCTGGTTCTGACCCTTTTTTTGATCGGGCTCGCAAGTGCTTGTTAAATCAAGCACTTGCGTTCGCCGTTTTTTTTTGGGGTGCATAGCGGGTTCTTTAAAATTCCGTACTGGCCAGAGTGACTTAGCATCATTTTTGGTTA # Right flank : GTCAGTATTCCGGCCCCATTCCTCGGCATTCATTCATGGATGCTACCCCTAGCAACTGGCCTCAATTTCCTACCAAAAATCACTGCGCGCGTCATCGTTAACTGCTCAAGGCCGGACAATTTATCAGCGCTGAATCTTCGACACAATTCATCAATACCAAATTCAAGACCGGTCCTACAGTTCCCATGGGGCGCAGCGCTGCTGTCCCTTGGTTACTCCTTTGAGCAACCTTGAGGGACAGAACCTCGCCCATCCAATGATGTAGCTCCCAAAAGTGCCTTGTACCTCACTCGTGCAGTTGTTAGTGCTGTGCCGATCCAAGACGCGCGCCGAGCCTTCATTGACTCGAATCGATCGCGTGGAGCTGCATATGCTGGACGAACCTAAAGAATTGCCAACAAAGCGCCCCGCGCTTGCAGATGCAGTTGATCTGCAGCAATTGGCAACTCTTATTTCCCGAGGCTTAGCCCGCGAAATCCTGATCCGACTAGACCCTGACT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //