Array 1 35927-37826 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114305.1 Desulfovibrio sp. 6_1_46AFAA supercont1.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 35927 32 100.0 35 ................................ ACAATGAAGGCGGGTATGGTAAGGCAGGATAGGTA 35994 32 100.0 35 ................................ GGCATCAAGGAGGAGTTCCGCCTGCTGGGCCTGCC 36061 32 100.0 37 ................................ AGCTTCCACCGCAAGGCGGCCAGCTCTAAGCGAGCAC 36130 32 100.0 35 ................................ TCGTATGACTCCCCCCAGATATCCCAGGCGCATTT 36197 32 100.0 34 ................................ CCACCCTGTGGAGCATGGGTGGGCGGCACGGATA 36263 32 100.0 33 ................................ GGGTCATGCCGGGCCAAGGTGGATGGCAACCGC 36328 32 100.0 35 ................................ CATTCGTCCCTTAGATGGAGAAGCCCGCCAATATC 36395 32 100.0 34 ................................ CTTACGAAGGGGCAGTCCTCCGCTGGTGTGGCGC 36461 32 100.0 34 ................................ CAGACCCGCGACGTGCGGGCCAAGCTGCCGGAGA 36527 32 100.0 35 ................................ AATTTCGGCGACAAGTTCGGTCAGGCTCTTTCCTG 36594 32 100.0 34 ................................ TCACCGGCAAGAGGGCGTTCAAAGACGGGAGCGT 36660 32 100.0 35 ................................ AGGTTCAGGGCGTGGGATTTGAGCTGGACGCTGAT 36727 32 100.0 37 ................................ ATGAATACACTTCTGGGAGGACAGGAGGCGGCTCAAG 36796 32 100.0 35 ................................ ACCCGTAGCTTCTACTGGTGCGTCATATGATGTAG 36863 32 100.0 33 ................................ TGAACCATTTCCGGAGCATTGTGCTTGGCCCAG 36928 32 100.0 35 ................................ ATAGCGCCATACCTCGCCCTCAATCATGGGAAACC 36995 32 100.0 35 ................................ ATCCAAGGCGGCACGTGCGCTTTCAATTTCCTCCG 37062 32 100.0 35 ................................ ATCCAAGGCGGCACGTGCGCTTTCAATTTCCTCCG 37129 32 100.0 34 ................................ GGCCGCATGGGAGACATACAGGCGCGATTGGATG 37195 32 100.0 36 ................................ ACGCCCGTCAGCATGACGCCCGGAATGACCGCGCCG 37263 32 100.0 35 ................................ TCTGCCTTTTCCTGGCTCGCCAGATCCGATTGAAC 37330 32 100.0 36 ................................ AAATCGGCCGGCAACGGCGGGGCCGAGGCCGGGTCG 37398 32 100.0 34 ................................ TTTTTTGGATGGTTCTTTCATGGCGCGCCTCTAG 37464 32 100.0 35 ................................ GATTAGAAGGTGCATACGGGCACGACCCTGGTCAT 37531 32 100.0 35 ................................ TGCCCAACTACAATGCGACTAAAATGGCCGGCGCT 37598 32 100.0 34 ................................ TTGATGAACGCGGCGGCCGCTCGTACATGGCGGG 37664 32 100.0 33 ................................ AGGGGTATAGGGGGCCAGCAGACGTAGCCACAA 37729 32 100.0 34 ................................ TTGATGAACGCGGCGGCCGCTCGTACATGGCGGG 37795 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 29 32 100.0 35 GTCGCCTCCCGTGCGGAGGCGTGGATTGAAAC # Left flank : GCCTATCCACCCTTTGTCATCAGGTGACACATGCTTGTTCTGGTGAGCTACGACGTCAATACGGAAGATGCGGCGGGGCGGCGGCGGTTGCGGCGCATCGCCCGGCATTGCGGAAATTGGGGGCAGCGCGTGCAGTTCTCTGTCTTTGAATGCGTTGTGGACCCGGCGCAGTGGAAAAGTCTGCGCGCGGCGCTGCTCAATGAGATGAATCAGGAAAAGGACAGCCTGCGCTTTTATTTCCTCGGCAGTGCGTGGCGAGGCAAGATAGAGCACCTAGGTGCAAAGCCGGGCTACGACCCAGAAGGCCCACTTATTTTCTGATGCGGGAACCTCAAGCTGACGGCTTTTCCCCGGCTGGTTCTCGATATGTATATTATCTTGAAATATAACATGAAAGTTTGTCGTTGTGCAAAAAAATGAGCGTTCCTGACAGAATGCCTCCAAGATGCCCGATATCAGGCCCGTAAATCCTTTAGCCTCGCAGGCCAACGCCTGTCACA # Right flank : CAGGGTATAGGGGGCCAGCAGACGTAGCCACAAGTCGCCTCCCGTGCGGAGGCGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGGAGGCGTGGATTGAAACAGGGGTATAGGGGGCCAGCAGACGTAGCCACAAGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACTTGATGAACGCGGCGGCCGCTCGTACATGGCGGGGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACAGGGGTATAGGGGGCCAGCAGACGTAGCCACAAGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACACCAAAAACGGCTGGGCCATGCGCGCGCGGAACATGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACTCTGGACAGCGACTTGTTCACCCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCGTGCGGAGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 38071-39035 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH114305.1 Desulfovibrio sp. 6_1_46AFAA supercont1.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 38071 32 100.0 34 ................................ TTGATGAACGCGGCGGCCGCTCGTACATGGCGGG 38137 32 100.0 33 ................................ AGGGGTATAGGGGGCCAGCAGACGTAGCCACAA 38202 32 100.0 35 ................................ ACCAAAAACGGCTGGGCCATGCGCGCGCGGAACAT 38269 32 100.0 35 ................................ TCTGGACAGCGACTTGTTCACCCCGGCGGACGCAT 38336 32 100.0 36 ................................ CCTGCCATGATCGGGGGCCACACCGTTCGAGGTGGG 38404 32 100.0 34 ................................ GATTCAGCTCCCCGACAATATTTCGAATCTCATC 38470 32 100.0 36 ................................ CCGTCGGGCACGTCCAGACGCCGGGCCGGAGTATGG 38538 32 100.0 35 ................................ CGCTGGCGCTGGTGAACACCGTACCGCCCGGAGCG 38605 32 100.0 35 ................................ ATGCTGGCCAAGAGGCTGGAAGAGGCCAGAGGCAA 38672 32 100.0 33 ................................ CAGCGTATCGAAGAGGTGTGCGAGCTGTATCTG 38737 32 100.0 34 ................................ ACCCTACGCGTGCGGGAAGAAGCGTGGGAGAAGG 38803 32 96.9 36 ..........A..................... CTCTTGAGGGATGCCGGACAGCTCAATGGTGAAGCT 38871 32 96.9 34 ..........A..................... TCCATGTAGATGATCAAGTCGATGGCACGGCCGA 38937 32 100.0 36 ................................ TTGCGCATTATAGTCGCTGCTGTTGGTATCGAGAGT 39005 31 84.4 0 ..........-.........A.T.GC...... | ========== ====== ====== ====== ================================ ==================================== ================== 15 32 98.5 35 GTCGCCTCCCGTGCGGAGGCGTGGATTGAAAC # Left flank : TACAATGCGACTAAAATGGCCGGCGCTGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACTTGATGAACGCGGCGGCCGCTCGTACATGGCGGGGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACAGGGGTATAGGGGGCCAGCAGACGTAGCCACAAGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACTTGATGAACGCGGCGGCCGCTCGTACATGGCGGGGTCGCCTCCCGTGCGGAGGCGTGGATTGAAACAGGGTATAGGGGGCCAGCAGACGTAGCCACAAGTCGCCTCCCGTGCGGAGGCGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGGAGGCGTGGATTGAAACAGGGGTATAGGGGGCCAGCAGACGTAGCCACAA # Right flank : CAGCTTGCCGGAGACAGTGGCTCAAGCCGTGGGGGGTCCGCTCCGCCTTGAGCCCCGCTCCGCCATTTGCTATAGACAGAGCGCACCCCTTCTTTCAGGAGCCTCCCATGTCCGATTTCGTCCATCTGCATTGCCATACCGAATACAGCCTTCTGGACGGCGCCATCCGCATCAAGGATCTCTGCGCCCGCGCCAAGGATTACGGCATGCCCGCCTGCGCCATCACCGACCACGGCAATATGTTCGGCGCGGCCTATTTCTACGCGGCCTGCAAGGACTTCGGCATCAAGCCCATCTTCGGCTGCGAGGTCTATGTCTGCCACGACCACACGGACAAAACCTCGGAACTGGCGCGCCGCCGTCATCACCTGATTCTGCTGGCCCAGAACGAGCTGGGTTATCATAATCTGGTCAAGCTGGTCAGCCACGGCTTCCTAGACGGTTTTTACTACAAGCCCCGCGTGGACAAGGAGTTGCTGCGCCGCTACGCCGAGGGCCTG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCGTGCGGAGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //