Array 1 31319-26108 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCOW01000023.1 Sporomusa sphaeroides DSM 2875 isolate Sporomusa sphaeroides DSM 2875, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 31318 30 100.0 35 .............................. GCAGCCTTAAAAGTTACCATATCAGACCTTATCGG 31253 30 100.0 36 .............................. CTTAGGCGGGCGGTTTTGCGAGAGTTGAGGGAGTTT 31187 30 100.0 36 .............................. TTGGCATGGCAGGTTTTGCGGGTGAATTACGCTGAT 31121 30 100.0 36 .............................. GAAGGCATCCAAAGCGGGTTAAATTCAACTTTCCAT 31055 30 100.0 36 .............................. TCTTTCTCCGGCAATCTCTCCGTCACCGGCACCCAC 30989 30 100.0 35 .............................. CTTGTTTCGGTGTCGTGGTACTTCATAAGGAGTTC 30924 30 100.0 36 .............................. TGGTGCCGATAAGCCGGAGAAAATAAAGTCAATTAA 30858 30 100.0 36 .............................. CCGCTACTTGACGGCGTAAAAGCTGTACCAGACTTT 30792 30 100.0 37 .............................. ATGGTCTTTGGTGTGGTGCAATTATAACCGCGTCTAC 30725 30 100.0 35 .............................. ACCAACCGCCGCGAAACTGCGGCAACTGCAATAAC 30660 30 100.0 37 .............................. ACTGTCCACCGATCGCTGTTTGCAGATTCTGCCCACC 30593 30 100.0 34 .............................. GCATTGTGCAAGATGTTATGCGGAAAATCATGAA 30529 30 100.0 36 .............................. TATTTATTGGCTACACACCATATTAAGAGTCGGGGT 30463 30 100.0 36 .............................. CTGTTACGGTTTCTCTCTTGACTTCTATATAGTTAC 30397 30 100.0 35 .............................. AGGTAGACCGCTTTAATGATTCTAAACAGGCAGAG 30332 30 100.0 35 .............................. TATATAGCGCAGGAGGTGGTAAAAATGTCCCCATA 30267 30 100.0 35 .............................. TTATCATTGTCGGTCAGAAACTGCTTGAGGGGACC 30202 30 100.0 36 .............................. ACCAAGCGGCTGATTTCACTCTGCATAAATGCGGCC 30136 30 100.0 36 .............................. ATTGGCACTAGATTTAAAAGTACCAGTCCCAACCAT 30070 30 100.0 35 .............................. AGTACACATCCCTGTAACCATCTGTATGCCTTGTG 30005 30 100.0 36 .............................. AAGCGTTCGGCAGTCTTTAGTTTTGAGCGAATGATT 29939 30 100.0 36 .............................. CTTGTCGGATGGAAATTCCGATGCGGAACGGTTTAA 29873 30 100.0 35 .............................. ACTGATATATGTCGTATTTGTGGCGCTCCATATAC 29808 30 100.0 35 .............................. TTCTTTTTCAAGCAATGGGGCGAGTTTTGCGCTAT 29743 30 100.0 35 .............................. CTGCATAAGGCTGAATCATGGCAATGCCTTTAACC 29678 30 100.0 37 .............................. CGAGCAAAGAAGCCCTGGTCTGCCGCGACTCCGCTAT 29611 30 100.0 36 .............................. TTTCCTTCCTATTATATCCAAAATTGAGAATTAATT 29545 30 100.0 36 .............................. ATATCAAGCCGTGAAAAAGCTTATCGACTTGAAGGT 29479 30 100.0 36 .............................. TTGCGTTCTTGGTCCTGTAGTAGATTCTAAGATTTT 29413 30 100.0 35 .............................. AGCTGACCGAATATTATGCTTTGGTTAACTCCGAC 29348 30 100.0 36 .............................. ATTGTGCCGGCCAGCGCAGTACCGATAACTAGCAAC 29282 30 100.0 36 .............................. GTCTTATAGGCAATTGCCGCCATTATGAAAGCACGG 29216 30 100.0 35 .............................. TTTTATCTGTAAAATCATCTTCCTCTAGGAGTTTG 29151 30 100.0 37 .............................. AAAGGCCAGGCAATGAGCAAGCCGCCAGTTTCCAGGG 29084 30 100.0 36 .............................. CTGCATCCATATCGACGCTGAACAGTGTGAGCGAAC 29018 30 100.0 36 .............................. TTGGCATGAGCCGGAATATCCGCCTGGAGGTTGATA 28952 30 100.0 35 .............................. CAATGTTTTCTTTGTCGGTTCGCTCACACTGTTCA 28887 30 100.0 36 .............................. GGTAGTTGTAAGTTTTCTTATCAATTTCCTGCTCTT 28821 30 100.0 35 .............................. CTATCCTCTGTTAGCCGGCCGTTTTTAATTAAAAT 28756 30 100.0 36 .............................. CTATGATCATGACGAAGGGTGTTGGGTTGATGGCGT 28690 30 100.0 35 .............................. CTGAGACGGGCGGTAATAACTGAGTTGAGGGAGTT 28625 30 100.0 34 .............................. AGCCGCTGAGAGCATTCAATTGCATATAAATCTC 28561 30 100.0 36 .............................. GCTAAAATCAGGTTGTTAATCAGGAATGACAGTGCT 28495 30 100.0 36 .............................. AGGATTGCATTGAGCTCCGAAAATTTAGGTGCAACG 28429 30 100.0 35 .............................. TCGTGCTCACTAAGCAGGTCTTTGACAATAGCAGC 28364 30 100.0 37 .............................. AGTACCCACTCTTAAGCGCCGCCTGAGTAGCATTGCG 28297 30 100.0 35 .............................. TTGGCTTGGTGATGGAATTTATTTTTTTGAAAACC 28232 30 100.0 35 .............................. AAAGGTTGGCCTTGAGTGCAAGACTACTAGTGCTT 28167 30 100.0 35 .............................. TCCGGCTCCTGCACCTCTAATTTAGGGGTGCACCC 28102 30 100.0 36 .............................. GATTATGGCGATGACGAGTGCAGACATTTTATGAAA 28036 30 100.0 35 .............................. TCGGTTTGCGTGGCGCGGAATAGGTTAGCTGCTAA 27971 30 100.0 35 .............................. GAAGGCCAGGCAATGAGCAAGCCGCCAGTTTCCAG 27906 30 100.0 37 .............................. ATTATGAAAGCGAGGTAAAAAGCACAATGGCAAAAAT 27839 30 100.0 37 .............................. ACATGACCGGGGAAGTGGTAGACGATGGCCAAGCCCA 27772 30 100.0 36 .............................. AACAATACGAAAAGGCTCACGGCGAGATTAAGATAG 27706 30 100.0 35 .............................. TGGTTTTGCGTTCTTCCAGTGTCAAACTGGGCGGC 27641 30 100.0 37 .............................. GTATCTGAGGCAGGCGCAATTTCTGCCGCTTCTACCA 27574 30 100.0 34 .............................. ATCCAGGATATCCGGGCAGCACAGAAGGCGGGGA 27510 30 100.0 36 .............................. CTGAAAGAAGGAGCTAAACAATCTCTTTCCGGGTGG 27444 30 100.0 35 .............................. TGGAAACAGGGGTGATAGACATGGCTATAACATAT 27379 30 100.0 37 .............................. ATCCATGAGGATAACGGTCTTTAAAAACGGTATCCCA 27312 30 100.0 35 .............................. TCTGCCTTGTAGTTGGCGCATATCAGGCGAAATAG 27247 30 100.0 35 .............................. TCCTATTTATTTACTTTATCTGTTTTTATCTATTT 27182 30 100.0 36 .............................. AGAATCTGAAGAAAACTGATGAGGAGTCATACCGCA 27116 30 100.0 34 .............................. TCACGAAGTATTAATTTCCGGTTTAAACTTAACT 27052 30 100.0 36 .............................. ACAGGTTAGCGCCGTATGCTCCGAGATAGGAGCCAT 26986 30 100.0 35 .............................. TCTTTACCCGAATTACTGTCCCAGTCATCCTCGAT 26921 30 100.0 35 .............................. AGATGCTGCAGTAGTACCTTGAGCGATAACAATTG 26856 30 100.0 36 .............................. TTGTAGATACTGCCATTGTACTGCTCTGCCTTTATA 26790 30 100.0 37 .............................. TATTCAGGCTGGCAATCGGCCCTGCAGTCACCGTCGC 26723 30 100.0 35 .............................. AGGTTGTAAAGCCTTATCATAACCGAGTGACCTAG 26658 30 100.0 35 .............................. ACGAACGATCATCAGGGAATCTTAAGTATATAATC 26593 30 100.0 36 .............................. GTATGAACAAAGCTCTATTAACAGCAATGACCCATC 26527 30 100.0 34 .............................. AGCTAACCCACGACCAGGAAGCCGGGTGATGACC 26463 30 100.0 36 .............................. CGTAAAGACTCCGCAGCGACTACCGGAACTTTTCGC 26397 30 100.0 34 .............................. GTAAAACTGATAGATGGTAGATTTGCCAGCACTC 26333 30 100.0 36 .............................. CTAATATGAGATATTCTACAGTAAAAAAAAATATAT 26267 30 100.0 35 .............................. CGGCATAACGGGGCCCCAACCCCATTATTCCACGG 26202 30 96.7 35 ............................T. GATGGTCATACCTATTGTTTTATCTGTGAGACTTA 26137 30 76.7 0 .........CT....C....A..C...GT. | ========== ====== ====== ====== ============================== ===================================== ================== 80 30 99.7 36 GGGCAACGAACACATTAGATGTATTGAAAT # Left flank : AAAACCGGTAGCTTTTTTCAATATGGAGGCCAAACAATGAGCAACGTTAACTATAATTATGCGTTTATCTTTTACGACATCGGCGAAAAACGGGTTCAGAAAGTCTTCAAGGCTTGCAAGAAATATTTCAAGCATCATCAAAAATCAGTATTTCGCGGGCACATAACCCCGGCTAATTTACTTGAATTAAAGGGTGAGCTTGCCAGAATTATTAACAAAGATGAAGATTTTATCACAATTATCAAGATGAAGAGTAAAGCCGATTTCGGCGAAGAAGTCCTTGGAACCGATCACCAGAAAACGGAATCACTAATAATTTGACTTTTTCCAAGCAGGTCTTTATGGACAAGGCAGAGAAACCCTTATAAACAGTGGCTTGGTGAGGATTTTATAATAAGATTGAAATTTAGCCTGGTTAGCTTGGAAAAATATCGGGATGATCCGTAATAATGCTGGGTTTTTAGGGGATTGATCTTTGGTGAGAGGCTGATTTTCTCTTG # Right flank : TCATCGACCTCCGCGCAACCCTGGTAGAATACCAGGCACAACTTTGTGACTAATATTCCAACCTAAATAAAATTCTTTTTACCCAGCAGAAGGAATTCAGGGAAAAAAGTAGAAATAGTAAAATATTACCATTGATTAGTTATAGCTAGGGGTGCCCGACGGCTGAGAGGATTCAAATCCAACCCTTGAACCTGATGTGGTTAGTACCACCGTAGGAAAGCTTTCTGTTGATAAATCAAGCTTACCCACGTTCCTCGCCTCTGCTATAGCTAAAATTTACTTATGGAGGATGAGGAAATATGTACACTACTCAAATGGATGCTGCCAAAAAAGGCATCATTACCGAACAAATGCGTATTGTTGCGCAGGAGGAACAGATCGATATTCAGGTGCTGCGCCAGTTGGTGGCCAGCGGCAGGGTAGCCATTCCCGCCAACAAGCACCATACCAGCCTTAGCCCTAAAGGGGTCGGGGAAAAACTTCGTACAAAAATTAATGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACGAACACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 41951-40288 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCOW01000023.1 Sporomusa sphaeroides DSM 2875 isolate Sporomusa sphaeroides DSM 2875, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41950 30 100.0 36 .............................. CCTGTCCACTGCCGCCTGATGTTGAAACCGATGCAC 41884 30 100.0 35 .............................. CTGTCCGAAAATGCTTCCATACTCATGGACGAGGT 41819 30 100.0 34 .............................. TGACCATATCCTTCGATAATGTCATTAAGTTCAA 41755 30 100.0 35 .............................. TTAAAGACCTATCCGGCAGAACTACCTTTTACGAT 41690 30 100.0 35 .............................. TTTAATACTGGTACAACAAACTATATTGGACCAGT 41625 30 100.0 36 .............................. TTATTATATCAGGTTATCAAAGAACAATCTATATAA 41559 30 100.0 34 .............................. ACCTTTAGATATACTTATACAAGGTTACTATGTA 41495 30 100.0 35 .............................. TTATAAGTCAAGCAGTACCAGCAGCAATCCGCGAG 41430 30 100.0 37 .............................. TAATTCAACCAGGAGAAACTTGTGCCGTAGGCACTGG 41363 30 100.0 36 .............................. AGTTTGATTTTACCTTTGCTTTCGTAGATTCCATAT 41297 30 100.0 35 .............................. ATTCTCCAGTCTCCAGAGAATTCGCTGAATTCTAC 41232 30 100.0 34 .............................. GCTGGTTTCAAGAGTGACACCATATTCCCTTGCT 41168 30 100.0 36 .............................. TCTTTCTCCGGCAATCTCTCCGACACCGGCACCCAC 41102 30 100.0 37 .............................. TAGACCTTTATAAACCGCGCCATATCTTGCCCCGGGG 41035 30 100.0 35 .............................. AACTAAGAATGGCATCGGTTATCGTACAGTAACAG 40970 30 100.0 35 .............................. ACATTATATAAATAATGCTGTGCATTCGTTATCTC 40905 30 100.0 35 .............................. ACAGAGTAGCCAGAATAGTCTCTTTGGTGGTCAAG 40840 30 100.0 34 .............................. TGAAGAAGTCGAAAGTTACCTCCAACAGTATTCC 40776 30 100.0 35 .............................. GAGCTTACCATGCATGGACTTAAGAAGCAGTCCAA 40711 30 100.0 35 .............................. AAGAGCTTATCTAAGTTTAGCCCATAGAGTTCTCC 40646 30 100.0 36 .............................. TGGGTGCCTCCAAAGCATCCCACAGCCAATACACCG 40580 30 100.0 37 .............................. ACTGGATTTCATCTGGGTTATCTGTAGTCAAAGCTTC 40513 30 100.0 36 .............................. CCGGTTCCGGTGAGGCAAGCAATGCCCTAATGTCGC 40447 30 100.0 35 .............................. TGGCATAGGTCTGGTATGTTCCACGAATTATAGTT 40382 30 100.0 36 .............................. ATTTACCGGATTGGTTGTTAAGGTAAAAGGCGACTT 40316 29 93.3 0 ........................-....C | ========== ====== ====== ====== ============================== ===================================== ================== 26 30 99.7 35 GGGCAACGAACACATTAGATGTATTGAAAT # Left flank : CGACTCACTTTCTGTAATGGCAGTTAAAGCCATTGTGGAAAAAGCAGGTGTTTAATACAGAATGTAAGTTACTACTGACCGTAATAGTGAATGCGTAATGGTTTGCGGCCATTTATAAGGTAGGAACAGGCAAAAGGGGCTTAACTCTGTTGGGAGTTGAGCCCCCTTTTGCGTGCGCAGGTGCGGTTTTGTTTACTAATATCGAACCTAAAGAGTGAGCTTATCAGAGTATTAATAGAAATGAGGCTGAAGAGTAAAGCCGGTTTCGGTAAAAAGATCCCTTGGAATTGAGTAGCAGAAAATGAAATCACTTATAATTTGATTTTTCCAGGCAGGGCTTTATCGATAAGGTAGCGAAACCCTTATAAACAGTGGTTTGGCGGGGTTTTTACAATTAAGACAGAATTTAGCTTGGTTAGCTTGGAAAAATACTGGGATAAACCTTGTAGATGCTAGGTTTCTGAGGAATTGCTGTTTTGAAAAACGCAGTGTTTATCTTG # Right flank : CGCCATGTAACATGATATATCATATTCTGTTATATTTCCGGGTTCAGCCGAAAAATAGTCAGGAGTTCGTTAACGGCATGTTTGGGATAATTGCCGTAATTGTACAACCTTATTTGAATAGTAAAGAGGGTAGAACCGGAATGGAAAAACAGGGCTTAACTCTAGGGAGTTAAGCCTCTTTTATTTGCTAAAAGTTCCTAACAAACTCGATAAATTTGCAGGATTTTCCTAATTATCCTGGAATATATTGTATATATTGTTAAAATGTAATGCTTTTACCGAGTTTTCGACAAAAAGAAGAGGTGATACATTGCTTTACCATGAGCTGATCGTCACAATACACTTGCAAACGGACTTGCCTGCGACCAAAGGTTACGAATACTTATCAAGAGTAATATCTAGTGCCATGCTGAATGATACCGAACTTAAGGAATTGCACGGTAAGCGGGCTCTAAAAGGGTATTCGTTCTGCAACTTATATCCCCGGGAGGCCGATAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACGAACACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //