Array 1 1150346-1146837 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFVO01000001.1 Chromobacterium violaceum strain NCTC8683, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1150345 29 100.0 32 ............................. ATGAGCGACTACATCGGCCTCAATCCGCATAC 1150284 29 100.0 32 ............................. TCGTTTGGAATGACGATGCGCAGGTATGCGAC 1150223 29 100.0 32 ............................. CACTGGGGCAAATACAACCCTGGCGAGGTGGC 1150162 29 100.0 32 ............................. ACCATGAGGCCGTTGACCCTGTCGAGGAAATG 1150101 29 100.0 32 ............................. TTGGCAGCGAAGCGCAGTTTACTGGTGGCCAT 1150040 29 100.0 32 ............................. GGGATGGTCCGGCCATTCTCATACCGGCTGCC 1149979 29 100.0 32 ............................. ATTTTGTATTCGTCCAACGTACACCCCCAAGA 1149918 29 100.0 32 ............................. ATGAACGCTAAGGCTGCGATAGAGAAATGTTG 1149857 29 100.0 32 ............................. CCGACCGGCGTCCAGTTCATCAGGTAGTCCAC 1149796 29 100.0 32 ............................. GCGCGAAGCTGGCGGAATGGAATCCGCAATAC 1149735 29 100.0 32 ............................. CCAAGGGTGGTGCCTGGCTATCCGGTGCGCAG 1149674 29 100.0 32 ............................. GGTAACTTATGGTTCTAATCTTCACCCCAACA 1149613 29 100.0 32 ............................. CGGGACATTGGGTGTTTCGGCTGCCGCAGGGG 1149552 29 100.0 32 ............................. CTGTTCGGATCCGGCTTGGGCGTGGGTAGCGC 1149491 29 100.0 32 ............................. ATTTCAATCATCTCTTGCCTCAGTATTCAGAG 1149430 29 100.0 32 ............................. AGGACCGGGACAGGTATACCGTAACACTTGAC 1149369 29 100.0 32 ............................. CGCGATGCGCGCCAAGCGATCAGCGTTCAGGT 1149308 29 100.0 33 ............................. GATGGCGGAGTCCAGTTTGAGGTTATGAGCAAG 1149246 29 100.0 32 ............................. TACTTTGATGAAATGGTTTTAGGCCCGACAGC 1149185 29 100.0 32 ............................. GCGAACGAAAGCAAGTCATCCCCTATTCCTGG 1149124 29 100.0 32 ............................. CCGTCGACGCCTGCGCCTGCCCCCGCTCCGGG 1149063 29 100.0 32 ............................. ACCGACATCACCTATTACCGCCAGGTCATGGA 1149002 29 100.0 32 ............................. TCATTGAACTGCGCAACGGCACCAAGAACGAA 1148941 29 96.6 32 ............................C AGGATTTGCCGGCCGCCGCCGGCACCGATCAC 1148880 29 100.0 32 ............................. CCTTCCGGCGGCCTCCATCCGAAGAATTCATC 1148819 29 100.0 32 ............................. CGCTTACCGTCATCGCTGACAAGATTGCGCGC 1148758 29 100.0 32 ............................. CTATGGTAAGGGCAGCCAGGAAGGCGAATGCA 1148697 29 100.0 32 ............................. GATGCATTCAACGACACCGTTGTCTGGCTACG 1148636 29 100.0 32 ............................. CGCCGGAGCCGGAGCAGGTCGTGATTACCGCT 1148575 29 100.0 34 ............................. GTGAACGCGTCCGTAAGGCGCGCAAATACGCCAA 1148512 29 100.0 32 ............................. GCGATGATGGCGGCGATGATGCCGCCGCCGGC 1148451 29 100.0 32 ............................. AGGAGCTGCCATGCGCTTTCTAATCGACGAGC 1148390 29 100.0 32 ............................. GTCGGGGTGGGCGACTTCGTCAACTTCACCGT 1148329 29 100.0 32 ............................. CATTACCTGCCAGAGGAGACGCTGGAATCGGA 1148268 29 100.0 32 ............................. TTCGTCGTGGATTGCGAGCATCACGGGCTGAC 1148207 29 100.0 32 ............................. ACCGGCTCGTTGCCGGCATCCTTCAGCTCCTC 1148146 29 100.0 32 ............................. TCCACCGCGCTGGCATATCCCAGGCGCTGCCA 1148085 29 100.0 32 ............................. CCCTTGACCTCATGAGCCTCCATCTCCCCACC 1148024 29 100.0 32 ............................. CGGCTAGCGGATGAGCGCGACCGGCTGCGGAT 1147963 29 100.0 32 ............................. TCGCTGCCGGGGCTGCGCATGTTCGCCCCCTT 1147902 29 100.0 32 ............................. GTCACGATCCAAACCGCCAGCATCCGCAACCT 1147841 29 100.0 32 ............................. CCAGCGCGCACCGGGGCCAGGACAAGCGGCAG 1147780 29 100.0 32 ............................. GCCGGTTGACCGTTGGCCAGATCGACACCGAG 1147719 29 100.0 32 ............................. TCACCTTCGCCGAGCGCCGCACCGAAACCGCC 1147658 29 100.0 32 ............................. GTATGCCTCGACATCAGCTACATGGGCATGAT 1147597 29 100.0 32 ............................. GTGGGCGCCCTGCGCGGTATACAGATAGAGAA 1147536 29 100.0 32 ............................. TCCGCTCGAACCGGGCGTGTGGCTGATCCCAG 1147475 29 100.0 32 ............................. CTATTGCAGTTGCTGCGGCGCTTTGCGCGGCC 1147414 29 100.0 32 ............................. TTTTCGGCGTCTTCCTTCTTGTGGGCGATGAC 1147353 29 100.0 32 ............................. GCCAAATCCTTCAGCGGCGCGCCGCTCTTCGC 1147292 29 100.0 32 ............................. ATGAAAATCTGGATGAACGTGGTGAAGCCTAG 1147231 29 100.0 32 ............................. GCCAGCAGCACCAGGGCGAATAGGGCGGCGAC 1147170 29 100.0 32 ............................. ACTTTGAGGACGCCATCAGCGGTGATGTGAAA 1147109 29 100.0 32 ............................. TCGATATGGTCGGCGGCCGGGCGCCAGCCAAG 1147048 29 100.0 32 ............................. TTGCCCAAGCCCGACCTGGCAGTCATCGTTGA 1146987 29 100.0 32 ............................. CCTGGAAACGTGCAGGGCAACCCGCAGCTGCC 1146926 29 100.0 32 ............................. TAAGTCGCCGTCAACTTGCCGTTGTCGTCGCG 1146865 29 82.8 0 ....................A...TG.TC | ========== ====== ====== ====== ============================= ================================== ================== 58 29 99.6 32 GTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : CGGACATCGAAACCATGCTGGACGCCGGCGGCCTGGACAAGCCGGAGGCGCAGGGCGTGGTGGACGCGGCGTTTCCCGAAGACGAGGGGCTGGGCGATGCTGGTCATCGTACTTGAGAACGCGCCGCCCCGGCTGCGCGGCCGGATGGCGATCTGGCTGCTGGAAATCCGCGCCGGCGTTTACGTGGGCAACTACAACCGCAAAATCCGCGATTACCTGTGGCAGCAGGTGGAAGAGGGGCTGGAAGACGGCAACGCGGTGATGGCTTGGCAGGCCGCCACCGAGGCCGGCTTCGACTTCGTCACGCTGGGCGCCAACCGCCGCATCCCGGCCGAGTTCGACGGCGCGAAATTGGTGTCTTTTTTGCCGCCGCCGGTGTCGGAAGCGGGGGGCGAATAGAGGGCGGGTGGGGTGTGGAGAAAGGTAGGTTTGGCTCTTTAAAAATCGGTAGATTTTTGAGTGGTAATTTTGTTTTGAAAAATCAGTTGCTTGCAATTGGT # Right flank : CTGCCCGTCTATCGCTTGCTTAATCCGCGGCCGTCGCGTTGCCCGATGCGCTTGCGATCGACGCGCCGTGGCTTGCCGTCCGAGGAGGGCGCTTCCTATGCTGCAAGAATCGATGTTAGAGGAATCGCCATGCAGCAGTTAAGAGTGAGTGTTCTGGTTGCCGCGCTGTTTCTCGTCGTCGCCGTGGTGTCCAAGACGCTGGCCAGCTCCGTCACGGAGACCGTGCCGGTGTGGCTGGGCAGCGGGGTGACTTTTTCCGCGTTGCTGATTTCTCCGCGCTGGCGCTGGCCGGCCATTCTTGCCGGCGTGTGGCTGGCGTCGGCGATATGGGGGATGTCCGCGCATGGCCTGGGGCTGGCCGGTGCGGCGGCGTTCGCGGGGATAGAGGTGGTCAGCGGAGCCGTTGGCTGCTGGGTGGCCGGACTGGGGCGCAACGATCCGGATTCCCCGATCGGCATGGCCTTGCTTCTTTGCGGCGCGGCGCTGGCGTCCTGCCTGGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1161472-1159121 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFVO01000001.1 Chromobacterium violaceum strain NCTC8683, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1161471 29 100.0 32 ............................. ACCTGGCCTTCCTTCGTGGCGATGGCAGCGGC 1161410 29 100.0 33 ............................. CAGGCCGGCTCAATAGTCCCGTATCAGGGTTAT 1161348 29 100.0 32 ............................. CCCCCGGCTTGCGGGGGCTTGTTCATCCCCAT 1161287 29 100.0 32 ............................. GAGCTGGACGCCCTGATGCGCGCCGCGGAGCG 1161226 29 100.0 32 ............................. CCCGTCGAGTCCGGGCTTTCTCATATGTGAAT 1161165 29 100.0 33 ............................. TGCCGTCCTCCGCAATAATTGTCGCGACGTCTG 1161103 29 96.6 32 ............................T ACTACTACACCATCGTCACCCCGAGATAAAAC 1161042 29 100.0 33 ............................. TATTTTGACGAAATGGTTTTAGGCCCGACAGCC 1160980 29 100.0 32 ............................. ATGAGCGCAGCAAAACTGCGCTTGATGTGGCT 1160919 29 100.0 32 ............................. CGCCAGCTCGCTGAGAAGCTTGTCCTTGAAAA 1160858 29 100.0 32 ............................. CCCCGCAACTGCGGGGCTTTGTTATTTCCAGC 1160797 29 100.0 32 ............................. CGCCGGCCACACGTAAGCGCTGCCCGGTTACA 1160736 29 100.0 32 ............................. CCGCGCGCGCCACGCTGCTGGCGTATGCCGAG 1160675 29 100.0 32 ............................. CAATCTGCAGATTTCTCGCTGTACGGTTTTCG 1160614 29 100.0 32 ............................. CCGCCTGGGCCACCCAGCAAGCGCTCCGTCAC 1160553 29 100.0 32 ............................. CTGCGCATGCTCACCCCACGCGAGCTCTACAA 1160492 29 100.0 32 ............................. GGTGAGGCGGTCAGCAAAAACGATACGAGAAC 1160431 29 100.0 32 ............................. GCTCGCTGGCGGCCGCTGCCGGTTCAGGATCC 1160370 29 100.0 32 ............................. ACCTTCGCCAACAAGACCCAGGCGCAGGCCGC 1160309 29 100.0 32 ............................. CTGCTGGTGGCCGGAGGGCGCGGAGGTGGAAA 1160248 29 100.0 32 ............................. CCGGCGTTTACACCGAGCTGGAAGCGAGGAGC 1160187 29 100.0 32 ............................. CGCCAGGTTCCGCTATCCAGCGTGGCCATCGC 1160126 29 100.0 32 ............................. GCATATGAATGCTCGTTCTGTTGTAATTGACA 1160065 29 100.0 32 ............................. TACACCCCAGTCCCGCCGCTGGAAAACCTTCA 1160004 29 100.0 32 ............................. GCCATGGTGCGCGAGCTGCAGATTGCCGCAAA 1159943 29 100.0 32 ............................. CGAAACACGCTTGCATGCGCTTATGCCTTTGT 1159882 29 100.0 32 ............................. TTGTCGCGGATATGCAGAGCCGTTACGAAATA 1159821 29 100.0 32 ............................. CTGCAGCGCGGCGTGGCGGAATTCTCCATCAC 1159760 29 100.0 32 ............................. TATCGGCACCTGTTTGACCCACGACAAGTGGG 1159699 29 100.0 32 ............................. ATTGGCGATGTCCTGGCCCGCTAAGGCGGCAT 1159638 29 100.0 32 ............................. GTGTTATGCGCGCGCCGAAGGTAAACCAACGC 1159577 29 100.0 32 ............................. CCGTGCCGGCCGCTGGAGCCGGTAACGGTGGA 1159516 29 100.0 32 ............................. CCGTGCCGGCCGCTGGAGCCGGTAACGGTGGA 1159455 29 100.0 32 ............................. GCGCGCGCGACAAACCGCCTCTCCTCAGCCAA 1159394 29 100.0 32 ............................. CCGATGGGCGAGACCAAGCGCGGAGTATTGCG 1159333 29 100.0 33 ............................. AGTGGCACCATTTGTGCCTACCTGCTATCACCG 1159271 29 93.1 32 ............CC............... CCTTGCTTCGCATGCAGTTCTGGGTGGTACAA 1159210 29 100.0 32 ............................. TCGGCTGGCACAAAACGCAGACCAGAGAGGAG 1159149 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 39 29 99.7 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : CCTGCTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCCGCCTGCCGCAGCTGCAATGCGCCGACCGCGCCTTCCGCCCCTTGCACGAGCAACTGGCCACCCAGGCGCTCACCGGCTTTGCCTGGTTGAACGCCGAGCATACGCTGCAGCAAACCCGTTTCGCCGACGGCAGCCGGCTTACCGCCAACTTCGGCCCCGCGCTGGTCCGTTACGATAAGCAAACCCTGCCGCCGCAAAGCCGGCTGGCCGAGCTGGCCGGCCAGCCGCCCAGGCTGCTGCCAGTGGCGGATTGCGTCGGCAAGTAAGCGGCGGCGATAATGCCGATGTCGTTTTGCCGGCCGTGGCGCGGCGGTTTCCCATGGCCGGCGAGCGGCATTGCCGAGCGATCTAGATGGTGATTTTTTGAGCGGAAAAATCGGTAGATTTTTGGGGTGGGTTTTTGTCTTTAAAAATCAGCATCTTGAAATTGGT # Right flank : TTCATCTACTGGCAGTGATACGGGATTTCAAAAATATGGGGATTGAAGCGTGGGCGATGGTTGTGGGAATCGTCAGGCCAAACGGCAGGTACAACTCTCGACCCTGCAAGTCGCTGCCTAGAGAAGTCCCATGGCATGAGTTATGTCAATATTCTTATTGATCAAAATGACAATGTGCTTTTGGGCTGATAGCCTGCGCGCTTGGGTTGGTTCCAGTTGGCAGATCGGTTTTCACTGGGAGAGGCGATGCAGACAGAGTTGGACGGCAAAAAAGAGGTTCATGAACCCTCCAGTGTAACCGGACTAAGTTTTGATGATCTGCACCCCGCGGTCCGACAGCTATGGGCCAAAAGCGGTGACCCGATTGGCCATGGCCTGTTATGTCACATGCTGGACGTGGCTGCGGTGACCAGAGCTTTGCTCGACTACTGCGGGATTTCGGCCAAGGCGTTGGCGCTGCGTTTCGGCCTGCCCGAATGCGCGGTGTTTCCATGGTTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1170789-1168745 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFVO01000001.1 Chromobacterium violaceum strain NCTC8683, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1170788 29 100.0 32 ............................. CATCGGCACCGGCTCACCGAATGAAAACGCCA 1170727 29 100.0 32 ............................. AGCGCCAGGCGCGGGAGGTGGCTGCGCGCAAT 1170666 29 100.0 32 ............................. CCGGCTCGTCGCCTCGTGCCTCAAATCGTGAA 1170605 29 100.0 32 ............................. CCGGCCAGCGCGCTGGTGCTGTCGTCCTCCAG 1170544 29 100.0 32 ............................. CCGGCGTATACCTGGGAACAGGCTTGCGTACG 1170483 29 100.0 32 ............................. GCGGTTATCTGGGACGAATGCCACCACATCGG 1170422 29 100.0 32 ............................. CCCGCGGCGGCTACGCTGGCGGCGCGGCCAAG 1170361 29 100.0 32 ............................. CCCACTCGAACCTGGCGTGTGGCTGATACCAG 1170300 29 100.0 32 ............................. CGACGGCCGGTCATCATCCCGTCGGGCATCCC 1170239 29 100.0 32 ............................. GGATTGAAGGAAACGAACCTTACCAACTTTTA 1170178 29 96.6 32 ............................A GATGCGGCAGAATTGGGAATTGCTACGTCAGC 1170117 29 100.0 32 ............................. AAGGAAAAGACAACAAGGCGTGTTGACAAGCG 1170056 29 100.0 32 ............................. GAATAGTAAATGTCTTTCGTCATTGTTGCAAC 1169995 29 100.0 32 ............................. GCGGGGGCGCTGGCCGTGGCAGCCGGAGCCGC 1169934 29 100.0 32 ............................. CAAACGCTGCTGGAATCGTTCCCGCCGCATCA 1169873 29 100.0 33 ............................. CACGTTATAAACGTCATCAATGCCACGAAACTT 1169811 29 100.0 32 ............................. CCGCCAATCCCCTGAGTTTGCGGAGTGAGATT 1169750 29 100.0 32 ............................. AATCAGAACAATCAACTCCATTGCAAATTGCC 1169689 29 100.0 32 ............................. CCGCAGCAGGCCGCCGCCGGGCGTGTTTGGAG 1169628 29 100.0 32 ............................. CCGCAGCAGGCCGCCGCCGGGCGTGTTTGGAG 1169567 29 100.0 32 ............................. AAAAAGGGCGCACGCATCAATCTTGAACACTA 1169506 29 100.0 32 ............................. GCGGAGCTGGAGTCTATGACCGTTCGCTTGCA 1169445 29 100.0 32 ............................. CCTGGGAGCAATTTCCACCCTGATATTCCAGA 1169384 29 100.0 32 ............................. GCCAAGCTGGAGCGCGGCGGCCTGCCGCTGCG 1169323 29 100.0 32 ............................. GTGGCGCAGTGGCCGGTGGTGCGCCCGTTCCA 1169262 29 100.0 32 ............................. CAGGATTCGACCTTTTTGCGTGTCAGCTCGGC 1169201 29 100.0 32 ............................. TAGCAGGCAGTAACCCCCCCTACGGGCATGGC 1169140 29 100.0 32 ............................. ATGGCTGGAGTCTGAGGTGAGCGAATGGATCA 1169079 29 100.0 32 ............................. CATGGCATCAAGCTGAAGGATACCGTTCACAA 1169018 29 100.0 32 ............................. TAACCATACCTTAGGTGCAATGATGATTTGCA 1168957 29 100.0 32 ............................. GCGAGGCTGACCCGCTGATGCAGTACATCCGC 1168896 29 100.0 33 ............................. TACTGAAAGGTAAGAAAAAATGAGCCGCAAATG 1168834 29 93.1 32 .........................G..A AAGCCAGTGCCTCAAGGCTTGAGGGTTCGAGA 1168773 29 69.0 0 A.A.........GTT..........GTGA | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.8 32 GTGTTCCCCACGCACGTGGGGATGAACCG # Left flank : TGCCCACGCCGGGCGGGCCCCACAATATCATCGAGTGCGGCTTGCCGGACGCCACCGCCAGGCTCAGCGGCTTGCCCGGGCCAATCAGGTGCTGCTGGCCGATCACCTGGTCGAGCGCTTGCGGGCGCAAGGCCTCGGCCAGCGGTTTTTGCGGTTCGACGGAAAAAAGATCGGACATGGCGCGATTTCGGCGGGATGGGGCGGAGAAACAGTATACCAGTTGGGGACACGCATGAAAAAAGTGGCAGTCAGGCGCTTTTTGCTTGCATGTCGATGGAATGAAGGTACGCTATGGCTGCTGGCCTAGCCTAAGCCTTGCTGTTGCGGAAGCTTGGCGTTCAGCATCAGAGGCGAGCGGTGTCGGACCCTTGTGCAAGGGACGATTTGCCAAGGCCTGGCGGGGTTTGTCGTGCTGATTTGAACGCCGCTTCATGGCTGGTAAAATCGGTAGAATTTCAGAGCGGGTTTTTGTCTTTAAAAATCAGCAGCTTGAAAATGGT # Right flank : CGGGGGACGGCTGGAGTGGTGTCGCGGCGCTGCCAGTCCGGCCGCGTCCGGCAACAAAAAAGCGCCCCGTGGGGCGCTTTTTTTCTGCACAACGAGTAAGAAGGCTTAGGCGCGCTTCTTGAATTCGTTGGTGCGGGTGTCGATTTCGATCTTTTCGCCGGTGTTGACGAAGGCCGGAACCTGAACTTCGAAGGTGGTGCCTACCAGGCGGGCCGGCTTCAGCACTTTGCCCGAGGTGTCGCCGCGCACGGCCGGCTCGGTGTATTCCACTTCGCGGATCACGGTGGTCGGCAGTTCCACGGAGATGGCCTTGCCGTCGTAGAAGGTTACCTGGCACACGTCTTCCATGCCGTCGACGATGTAGTTGATGGTGTCGCCCAGGTTGTCGGCTTCCACTTCGTACTGGTTGAATTCGGTGTCCATGAACACGTACATCGGGTCGGCGAAGTAGGAGTAGGTGCAGTCCTTGCGATCCAGCACCACTACGTCGAACTTGTCGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //