Array 1 103557-103171 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZOX01000011.1 Vitiosangium sp. GDMCC 1.1324 contig11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =============================================== ================== 103556 26 100.0 24 .......................... CCCCCCCGGGGCCGGGGCTGGTGT 103506 26 100.0 21 .......................... CCCCCCCGGGGCCGGGGCTGT 103459 26 100.0 28 .......................... GCTCGGGGCTGGTGTCCGGGGCTGGTGT 103405 26 92.3 26 .......................TC. GTGTCTCGGGGCTGGTGTCTCGGGGC 103347 26 100.0 28 .......................... TGGTGTCAAAGAACTCCGGGGCTCGGGG 103319 26 96.2 24 ..A....................... GCTGGTGTCTCCGGGGCTGGTGTC 103269 26 100.0 47 .......................... CCCCCCGGGGCGCCGAGACGGTGTCCGACGGTGTCCTGTCAAAGAAC 103196 26 73.1 0 .C.A.A..............G..CCT | ========== ====== ====== ====== ========================== =============================================== ================== 8 26 95.2 28 CGGGGCTGGTGTCAAAGAACTCCGGG # Left flank : CCTGCACCGGCACTTCTCGTCGCGGCAGGCGCTGCTGGAGGCGGTATTCCGCGATGGCGTCGCGCAGCTCTGTGCGCGGGCAACCGCGAAACCGGGCAAGGAGCCTGCGGCCGAGTTGGCGGATTGGCTCGAGGAGTTGACGGTCTACACCGCGACTCACCGCGGGCTTGCCGCTGCGCTGCTGGCCGGCCCGGATGGCCTTTCGGCTGAGGAGATCTGCTGCACCGACAGGGTGCTCGACGTGTTGAACGTGCTGGTGGCACGGGCGTCATCGGTGGGCGCGCTCCACGCGGGCGCCACAACGGAGGACCTGATGCAGCTGGCGAACGCGATTGCCGTCGCCAACGAAGATGATCCGCTCACCGCGCGCCGGGTGTTGCGCCTCGCGCTCACCGGCATACGGCCGTGAAGGCCGCGAGAGCGTCTCCTCTTGGCGTCCGCTGCGAGAGCGGCGCGCGGCTTCGTCGCCTAGCTCCCGGGGCTGGTGTCGGGGCTGGTGT # Right flank : GAAACGGTGGTCAAAGAACCCGAACTGAGTGGCGGCAGAGCGGGCTTCACGCGAGACTCAAGCAACAGGTAGACAGGCTTGGCCTGGACGGGTGAACCGACCCGCCTCCAAGTCTTTCCGAGGACTTGCGCGCTGGCCCACGAGGTGCATCGAGCCCTGCGAACCGACTGCAGGGGATGGGGATGGGCTGGCCGCTGAGGATGTTCCAGGAGGAGGGCTTCTACTTTGTCACTTCCAGGTGCTTTCAAGGGCGCCTGCTGCTGCGCCCCTGCCTGGAGGTGAACGAGGTGGTGGGCGGGGTGCTCGCCAAGGCCGTTCTACACAGCTCCGGCTCCGTGCGCTTGCACGCCTTCACCTTCGCCTCCAATCACTTCCACCTGCTGGTGTGGGCTCGCGGCGCCTCTCTCTCCTCCTTCATGCAGTACCTGCGCGCCAACCTCTCCAGGAAGGTTGGGCGCCTGGTGGACTGGAGTGGCGGCTTCTGGGAGCGGCGCTATTCG # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.28, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGGGGCTGGTGTCAAAGAACTCCGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 267787-259628 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZOX01000005.1 Vitiosangium sp. GDMCC 1.1324 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================= ================== 267786 36 100.0 36 .................................... CCGGTCTTGGGGCTCGGCACCTTGCCCGACCCGCTG 267714 36 100.0 34 .................................... AAGAAAGCCCCCTCGGGCCCGCAGTACACCCCCA 267644 36 100.0 37 .................................... ACGCGTTCGCTCATCTTCGGCGTCCAGACCGTCAAGG 267571 36 100.0 34 .................................... ATGGCCAATACCTCCGGGAAGAAGATGCTCGAGT 267501 36 100.0 109 .................................... CGGGCCTTGACGATCAGCAGAATCTGCCGCCACGTGATGGCGCCGATGACGCGCAGTCGGGCGCTGGTGGAGCACCGGGCCTTGACGATCAGCAGAATCTGCCGCCACT 267356 36 100.0 34 .................................... TATTCCATGTAGGGGAACAACCCAGTCTGGTCCA 267286 36 100.0 38 .................................... AACTGGTTGGCGATGTTCGGCGGCAGCCGGAAGTTCAG 267212 36 100.0 34 .................................... TACACGGCTGCTTCGTTGTCAGTGAACGTGGACA 267142 36 100.0 35 .................................... AGCGTGGAGAGCGGCTGGCGCTCCATGGCTGAGCA 267071 36 100.0 35 .................................... AGCAGATTGGCCGCCTGACTGGCGCTGATGGCCAC 267000 36 100.0 35 .................................... ACGAGCTTGTTGCCGCTGATGCTGATGCCGTTGTT 266929 36 100.0 35 .................................... TCAATCACGCGATGGCTTGTCGCCTTCAGCATACA 266858 36 100.0 35 .................................... ATGTCGCCGTCACGATGTTGCTGATCGTCCCGCCG 266787 36 100.0 37 .................................... GAGGGCGATTCGGCAGCAGGTTCCATCAAGAGTGCCC 266714 36 100.0 35 .................................... CACCTGGAGCCGCTGCGAATCCTCGGGGAGGCAGT 266643 36 100.0 36 .................................... CTGGGGGGGCGTACCGCGTGGTCCACTCCGTGTTGG 266571 36 100.0 39 .................................... TCGCTGACGAGAACCTTTTGCCCTCTTTCAAGAGACTCC 266496 36 100.0 36 .................................... TCGATGTCGTTGCCCGCCGTGCCCTTGTTCCGGGCC 266424 36 100.0 36 .................................... ATGACGGCAAAACGGTGCACGTCCCCCGCCTGTTTG 266352 36 100.0 34 .................................... TATCGAAACGTGCAATCAAGAGAGTTATCACTTC 266282 36 100.0 33 .................................... CTGTTGCGGACTTCCCAGAATCGCTTGTACATG 266213 36 100.0 36 .................................... TAATCCCGCACTGCGGCCTGTACTTCTCCGCAGTGG 266141 36 100.0 36 .................................... CCCCCCACGAGATCCCTGGTCCTGTGTGCGGCGGCA 266069 36 100.0 37 .................................... AGCCCTGATTGGGTGGCCAGACCCCAGCCGCATTAAA 265996 36 100.0 36 .................................... GTCTTCCCGCCCGTAGACGGCAACTTGCTGTCGGTC 265924 36 100.0 33 .................................... AGGAAGGGGTCGCGGTCCGGCGGCGTCTGCATG 265855 36 100.0 34 .................................... GTGTACCTCGTGGACATGGCAGTGGCGGCCGGCA 265785 36 100.0 37 .................................... AGCGTGTACCCGACGCGCGCGCTCTTCAGCAGCGTGG 265712 36 100.0 35 .................................... AACGTGCACCGGGTGGCAGCGGCCGCGCGGCAGAT 265641 36 97.2 37 ...........T........................ TTGGGGTTGTAGAGGGGGTCATCCATGTACGTCGCGC 265568 36 100.0 35 .................................... AGCGCCCAGTGGGACGTCGCTGGCCGCGAGCAGTG 265497 36 100.0 34 .................................... CGATCCCGTCGCGACGTCCATCTATGCACGTCAC 265427 36 100.0 38 .................................... AAGTCGCGCAGGCGCTGTGCGTGGCGCTCCTTCTCATT 265353 36 100.0 33 .................................... TTAACGGAGCACCGGGGCGAATCAGAATCAGGC 265284 36 100.0 37 .................................... TCGAAGGTGAGGAAGAATCCTCGATTCTCGACGAGAC 265211 36 100.0 36 .................................... GAGAAGAACCCGCGACCGACCTCAACGGAATCGGCG 265139 36 100.0 29 .................................... TCGACGTTGGTGACGATGACCTTGGCGTT 265074 36 100.0 34 .................................... TGCCCGTGCGCCTTCATCACGTTCGCAGGCGTCA 265004 36 100.0 33 .................................... AGATTGGGCGGCAGGAAGAAGTCCAGCCGGTTG 264935 36 100.0 37 .................................... GCGGTTGCCGTCGTCACATCCGCGCCGGTCTTCCCCA 264862 36 100.0 35 .................................... ACCTGGACGAGCTCGAGCCATCTGGCGCCATCGCA 264791 36 100.0 35 .................................... CGTGAAGCGGACGTGAGTCAGGCCGGGCCAGCGGA 264720 36 100.0 34 .................................... CATGAGTGCGCGGTGCGACAGGCGCAGATCCTCG 264650 36 100.0 33 .................................... TTGAACAGGTTGGGACGTGTGCACGTCCATCGT 264581 36 97.2 36 ....T............................... CCCGAGACGCGGTTCAGGGGCGCGCCCGTGGGGCCG 264509 36 100.0 36 .................................... TGGCCGGAGTGGAAGCGCGTCAAGGACACGGTCCAA 264437 36 100.0 36 .................................... TCCACGGGCTCGGGCGGAAGCACCGGGGCCTCGCGG 264365 36 100.0 36 .................................... TCCACGGGCTCGGGCGGAAGCACCGGGGCCTCGCGG 264293 36 97.2 35 .................................T.. ACGGAGGAGATGCCCGAGAGGGGGGTGACCACCTG 264222 36 100.0 34 .................................... TCGTGCCCCGCCTTCCGCTTGAAGGCGCCCACTG 264152 36 97.2 33 ................G................... CTCGAGAAGGCGGACGTGTTCCGCGAGCAGTAC 264083 36 100.0 37 .................................... TTCGTGATGCGCTCGGACGGATTCCTCGTCCCGGCCC 264010 36 100.0 39 .................................... AAAGGGGGCGGGCTCAAGGCCACGGGCGTCGCCGACCTG 263935 36 100.0 35 .................................... AGGTACGCCTGTCCATCCTTCTGGAAGAGATGTGG 263864 36 100.0 35 .................................... GTGGAGACGATGACGGAGTAGCCCTTGGCCTTCGC 263793 36 100.0 38 .................................... AAGTTCTAGGGCATCCTTGTTGCCGAGAGTGGCGGAGA 263719 36 97.2 34 ........................T........... TGGTTAGGCAGGGCGAGCAGGGTGGAGTTGAACC 263649 36 100.0 34 .................................... ATGCAGATGTCGTTCACCAGGGTGAAGCCCGGCA 263579 36 100.0 35 .................................... ACGATTATGGCGGTGTTGGTTGCCATCGCCCCCAT 263508 36 100.0 36 .................................... TCTCCTCGAGATTCACAGGGCCTTCTCCGAGATGAA 263436 36 97.2 37 .................................T.. GGGAGGCTCAACGGGGCTCTTCACCATGGGAGAGCGC 263363 36 100.0 35 .................................... AGGCTCCCCGAAAGGACACGCGCCAGCACATGCAT 263292 36 100.0 34 .................................... ATGAAGTGGAATGGCGTCCTGCTCGTGGTGCATC 263222 36 100.0 34 .................................... GTGAAGGCGCGCAAGGACGTATCCATCCCCCGTG 263152 36 100.0 35 .................................... TTCTTGCTGAACCGGTTGGAGACGAACCCACCCAG 263081 36 100.0 35 .................................... GACGGGAACGAAGTCTTCTGAGGAGGACCGGTCAT 263010 36 100.0 35 .................................... GACTTGAGCTTGTAATCGTTGACGCGGTTGTAATG 262939 36 100.0 35 .................................... AGGATGCGCATGCGTCCCCTGATGGCCTGCATCTC 262868 36 100.0 37 .................................... TTCAACAAGCGACGCAATGAGGTGAAGGCGTGAGCTC 262795 36 100.0 37 .................................... TTGAGCTTGGCGGCCATCTCACTCAGGCCCTTCACCA 262722 36 100.0 38 .................................... AAGCTCGCAGCGGTAGCAGTCAAACGTGCCCCTCGCCC 262648 36 100.0 34 .................................... TGCAACCGCCCATTTCAAGGGGACGCGGCGGATG 262578 36 100.0 35 .................................... TTCAGGTGGCTCTTCTGCCCGCGGAGGTCCTCGTA 262507 36 100.0 34 .................................... ACTGGCTGCGGCTCGTATGCACCCGGAAGCCGAA 262437 36 100.0 37 .................................... TTGAGGTGCGACTTCTGCCCGCGTAGGTCTTCGTAGT 262364 36 100.0 36 .................................... ACCCCACGAGATCCCTGGTCCTGTGTGCGGCGGCAG 262292 36 100.0 35 .................................... CGTAACGGCTCCCTGGAGGAGCTGGTGGCTGAGGT 262221 36 100.0 34 .................................... AGGCTGATTTCGGCCTTGATGGTCTCGCCCGCCG 262151 36 100.0 35 .................................... TACCAGCGCGCAGCATCGGTCAGCGTCCTATGGCG 262080 36 100.0 33 .................................... TTGCGCAGGCCGTAGGCGTTGAAGTCCTCGGGG 262011 36 100.0 38 .................................... CTGCGGATGCGGGCCATGTCAGCACCCCCTCATGAGTC 261937 36 100.0 35 .................................... TCATGTGCCCACCCGAGTGCCCACGCGGTGATGAG 261866 36 100.0 35 .................................... CGCTTCAATTCTGCCTCGAAGCGATCGCGGGCCTG 261795 36 100.0 34 .................................... TACACCTCGATGCCGTCGTCCTGCACCTTCTGGG 261725 36 97.2 34 ........T........................... CCATAGGACAAATCGTCGCCAGAGAGCCTCGTGT 261655 36 100.0 33 .................................... TTCGTGGAACACCTCTTGGAAATGGTCGACATG 261586 36 100.0 33 .................................... TGGGCGCTCCTTAAATGAAAATGGTCCGCCCCG 261517 36 97.2 35 A................................... CGTGAGACGAATCCAAAGAAGCGGAAGGTGATTCA 261446 36 100.0 37 .................................... AGAAGGGCGAAGCGAGGAAGCGCTTGAAGAAGTCCAA 261373 36 100.0 38 .................................... AAATACCTCGCGTGTATTGACTGCCTGGAGCCAGTGGT 261299 36 100.0 35 .................................... TTTGTGCGCGCCAAGTGGGTCAATGGCCTTGGCGT 261228 36 100.0 34 .................................... GAGATTGGCCTGCAGCACCTGCTTGCCCTCGGCG 261158 36 100.0 37 .................................... TGGAAGGGTGGCACGTTGTAGGCGCTGGCCACCTGCT 261085 36 100.0 36 .................................... GCGAGATTCGGAAGACCCAGCTCGAGGGCCCCTCCG 261013 36 100.0 36 .................................... GACCACACGTTGGCGTAGCGGCGCTTCCGGCCGCCA 260941 36 100.0 36 .................................... AGATTGAGTGGTGGGACTGGGTGGAGGGCGTTGTTT 260869 36 97.2 33 .....T.............................. AGGAGGACGAGCGCGCGTGCCTGCACACGCTCC 260800 36 100.0 35 .................................... CAGCTGAAGCTTTCGCACTTGGTAGGTGATTCGCG 260729 36 100.0 36 .................................... ACATACCTGTCCATCGCTCCGGCTGTGGGAAGTGTC 260657 36 100.0 33 .................................... ATGGCTCCGGCAAGCTGAATGCCCGTCACCATG 260588 36 100.0 35 .................................... TCCAAGCACGTGAGGGGGCCTATGACATGTCCCAT 260517 36 100.0 34 .................................... GGGTGCTTCTTCTTGTCCGTCCCGTTGCGGCGCA 260447 36 100.0 34 .................................... CTCTGGGGTTGGCCCTGACCGGGGCCGCGCCCAA 260377 36 100.0 37 .................................... CCGCGCGTCTGCTGAAGGTCGTGCCGTCCGCGGAGAA 260304 36 100.0 36 .................................... CTGCGTTTCCCCGAGGGCAAGGCGGCGCCGCTCCCG 260232 36 97.2 37 ..............A..................... ATGAGGCGCTGGCGATGTGGCTCGCCGGTGATGAGCG 260159 36 94.4 33 .................T..............T... AGATGAATCCCGTTCTTGGACAACAGCCAGTTG 260090 36 100.0 33 .................................... ATCCTCCACCAGACGGTGACGTTGCCCGTCGCG 260021 36 100.0 35 .................................... TGCTGGGAGCTGCAGTACGAGACGCCCGGCGGGGC 259950 36 97.2 34 ..T................................. ATGGTGCCGCCGCCATCCTGATCCATCTTCGTGA 259880 36 100.0 37 .................................... GTGTCATGCATGAACCGCCAGCCCGCCTGGGGGTGGT 259807 36 100.0 36 .................................... GCGATGACTGGAATCGGAGCGCTCGGAGTTGCGGCG 259735 36 97.2 36 ..........T......................... TACTGGGCGGACCGCTGGACACCGGGCGGCAGGGCC 259663 36 88.9 0 .............................C..AGG. | ========== ====== ====== ====== ==================================== ============================================================================================================= ================== 114 36 99.6 36 GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC # Left flank : ACATCCGCAGCCCGAAGCGCTGGCGCAAGGTGTATGACCTGATGAGGGGCTATGGGGAGCGGCTGCAACTCTCCGTGTTCCGCTGCTCGCTGACCGACCGGGACCGGGAGAAGCTGCGCTGGGAACTCTCCCAGGTGATGGAGCAGGAGGACACCTTGCTGGTGATTGGCCTGTGTGGCGGGTGTGTGGAGCGGGTGAGGGCCATCAATCCGAAGGAGGGGTGGCCGGAGGAGCCGGCACCGTTCCGTGTACTATGAGACATTCAAGCACCGGGGCGTGGCGGAGTGGGGCGGGGGTGGAAAGTGGGGAATGTGCAAGTAGAATCAAGGAGTTGGAAGCTCTTTGGGAACTGAATAGGTGCATGATTGGAAATTCCCCAGCGATCATGCGAGGTTGGAGGCCGGGGCGGGAGCTTGGGTGGCCCGTCTCCGGGGAGGCAAGGAGGTGCATGAATACCTGGCTCGTAAGTATGCGGAACTACGAGGGAATTGGTGCCCGCA # Right flank : CGCGCTCGGGCTCCGCCCGGGCCGGAAACTCAAGGGCTCACCCGCGGCGGGGAAGCAAGCAGGGAGGCACGAGCGGGCCACCGGTTCGCCCTTGGTCCCGGGAGCGGGAGCGACGATCATGGTCCCTCGATGGAGTCCTCCCTCCCCACCCATGTCGGACCCTACAGGCTGTTGCACCTGCTCGGCAGCGGGGGCATGGCGAGCGTCTATGCCGCCGAGCTCGAGCCCCAGGGGCAACGCGTGGCCCTCAAGGTCCTGTCCCCCGAGGCGGCCCGGGAGCCGCACCTCGTTGCCCGATTCCTCCAGGAGGCCCAGGTCCTGGCCCGGCTCGAGCTCCCGGGGGTGGTGCGGGTCCTGCACGCGGCGCGGCAGGCGGACACGGCGTTCCTCGCCATGGAATACCTCCCGGGGCTGTCCCTGCGCGAGTGGATGCGCCAGCACGCGGAGCCGGTGCCCCTCCGGGACGCCCTGGACGTGGGCGCCCAACTCGCGGACATCCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //