Array 1 15628-17272 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNG010000031.1 Bifidobacterium pseudocatenulatum strain 1001099B_141217_G10 NODE_81_length_20813_cov_72.9394, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================== ================== 15628 33 100.0 35 ................................. ATCGAGCAGACGGACGCGCCGCGCATCGTGTTCGA 15696 33 100.0 34 ................................. AGCTTTAGCGTGCGTATCGACCGCGAAAACTCGG 15763 33 100.0 34 ................................. GTTTGGTCAATCCATTGAGCAAAAGTAATAGCCA 15830 33 100.0 34 ................................. AGTGCATAATTGTCAGTTTTGTTGTAAATGGTAC 15897 33 100.0 33 ................................. GAATTCACCATCAACGCTTATCCGACCGCAGAC 15963 33 100.0 34 ................................. GATGAGTGTTTCGTCTATGGAGAATCGGTATGCC 16030 33 100.0 34 ................................. CACGTCGGAATCGTCCGAGGTCAATGCGGCACGC 16097 33 100.0 34 ................................. TGCAAATGACAAACGTATTGAGTGATGAAGCATT 16164 33 100.0 33 ................................. GCATTCCAGCATCGAGCACCGGAAACGGCGATG 16230 33 100.0 33 ................................. ACTTCAGTCTTCCGAGACAACAGTGAGGGTTAT 16296 33 100.0 34 ................................. TTCTGCTGGGACGAAATGCTCGAAACCACCAATA 16363 33 100.0 33 ................................. TTGTTGTAGAAGGGCAGCACGTAGGCTCGTCCC 16429 33 100.0 32 ................................. TGCGTCAATCGGATACATGTACTCGGTATTAG 16494 33 100.0 35 ................................. CACGACCGTCTTGGACTCGCTGATGCTATCGGCGA 16562 33 100.0 33 ................................. ACTGACCTTGAACCTTCCATCCTGCTGATGGAA 16628 33 100.0 34 ................................. ACGCCGTGTTCTCTCACTCCCCTGAAACGTGTTC 16695 33 100.0 34 ................................. AACTCACGCTCTGATAGGACAGTCAAACCCCCGC 16762 33 100.0 37 ................................. AGCAGACCGCGAACGAATTGAAAGCGTCTCCAATGTC 16832 33 100.0 35 ................................. CTCCAATCATTTGACCAGATAGGCGAGGTATTCGG 16900 33 100.0 40 ................................. AACGTCCAGATCAAGGACGGCGTCGCGTACGTGTACGCGA 16973 33 100.0 35 ................................. AACATCCAGGACAAGGACGGAGTACTCTATGCCTA 17041 33 100.0 33 ................................. GAATTGGTCTGCAGGCGTAGGAGCTGCTCCGCG 17107 33 100.0 33 ................................. CTTGAGTTCGCGCACGCTGCAGGTGTTGGTGCC 17173 33 100.0 34 ................................. TTTTGGACCGTTTGGTCAAGCGAAGCGTGCCCGG 17240 33 81.8 0 ....T..T..T..C..A...C............ | ========== ====== ====== ====== ================================= ======================================== ================== 25 33 99.3 34 GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Left flank : GGCGTCTACGTTTAGTGGCAAAAAGCTGCATGAAATATGGGCAACGCGTGCAAAATAGCGTTTTCGAATGTAGCGTTACTTCTGCGGAGTATCTCACGCTTAAGCATGATCTGTTGAGCATCATCGATGTCAAAACGGATAGTTTGAGATATTACAATTTGGGAACGAACTATTCACGGCGCATTGAACACTTAGGCGTTCAACGTCATGTTCCCGTTGATGGAGTCATGATGGTATGACTTCTAAACGACATGCAGTGCGACCCTGAAGCAGTCATGAGTTACAGGTAGGTTCGCACCTTTTTTGTGCGGAGGAAATTAAAACTGGAACCCTGATGTAATTTCGGATTGTTGTTTGATAATCGAAAAGTGTAGTCAGATAGAGTTTGATCTTTGCATTTGGACGTATTTGGGGCGGTGGGGAACTGATGTAATATGTGTATCAGCCGAGATGAGGTTTTGCTTGAATCATTATTTGGTCAAAAATGTCTCATTTCTGCG # Right flank : TCGGTGTCTGCAGCGTTCCGGCCACCGCGTGGATGTCGCTCTCCCTGTTTATGTCCAGTGTTCTCCGCACATGCGGGGATGATTCCGCATGTGCGGGACTGTTAGTTTCAATGACAATCCGAGGGGTGAAAACGAGTTTATGGGCACGCGTGCGGAGTCTCAGATGCGCAGAACTCCTCACGCAGTGCATATCACAATCCCAGCCAGGCGCGTAGGTCACGAATTTCCTGATCGCAGATGCCGTGGCCCATTCCCGGATATTCGAAATACGTGAGATTGCCGGTTTGCGCAAGTTTGTTGTGCGCGCACCGTTGATCGGCTAAAGGAATTGTGCGGTCTTCGCTGCCGTAGCAGAGCGCGAATCGCGTGCGTCCGGTCGCGGGCAAAGGCTCAGCGGTTTCGCCTTTGAATGATGGGCTCATTAGAATCGCCATGTCGAACGCATCGGGATGTTCCGCAACCATGCGATACGACAGGTATCCGCCCTGCGAAAACCCGAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //